Bhi03G002018 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G002018
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE
Location	chr3: 58467149 .. 58467349 (+)
RNA-Seq Expression	Bhi03G002018
Synteny	Bhi03G002018

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATTGTTGTGGCGGTGTCTCTTTTGATCTTGCCGCTTGTGCTGCCCCCGTTGCCGCCGCCGCCGGTGATGCTGCTGTTTGTTCCGGTGTTGATTATGTCTTTGCTTCTGTTCTTGGCGCTGTCACCGTCACAGGTTCCGGCGGAGGAGCACCGTGTCGCTGACGGCGGCGGCGGCGGCAGTCACAATTCGGCTTGA

mRNA sequence

ATGTTGATTGTTGTGGCGGTGTCTCTTTTGATCTTGCCGCTTGTGCTGCCCCCGTTGCCGCCGCCGCCGGTGATGCTGCTGTTTGTTCCGGTGTTGATTATGTCTTTGCTTCTGTTCTTGGCGCTGTCACCGTCACAGGTTCCGGCGGAGGAGCACCGTGTCGCTGACGGCGGCGGCGGCGGCAGTCACAATTCGGCTTGA

Coding sequence (CDS)

ATGTTGATTGTTGTGGCGGTGTCTCTTTTGATCTTGCCGCTTGTGCTGCCCCCGTTGCCGCCGCCGCCGGTGATGCTGCTGTTTGTTCCGGTGTTGATTATGTCTTTGCTTCTGTTCTTGGCGCTGTCACCGTCACAGGTTCCGGCGGAGGAGCACCGTGTCGCTGACGGCGGCGGCGGCGGCAGTCACAATTCGGCTTGA

Protein sequence

MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPAEEHRVADGGGGGSHNSA

Homology

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BLAST of Bhi03G002018 vs. TAIR 10
Match: AT2G41230.1 (unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 1.5e-05
Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPA 50
          +L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Sbjct: 32 LLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPS 80

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BLAST of Bhi03G002018 vs. TAIR 10
Match: AT3G59900.1 (auxin-regulated gene involved in organ size )

HSP 1 Score: 45.8 bits (107), Expect = 1.5e-05
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1   MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPS 46
           +L+ +  SLLILPLVLPPLPPPP MLL VP+ IM LL+ LA  PS
Sbjct: 72  LLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPS 116

[Close]

BLAST of Bhi03G002018 vs. TAIR 10
Match: AT2G44080.1 (ARGOS-like )

HSP 1 Score: 45.1 bits (105), Expect = 2.6e-05
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1   MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPS 46
           +L+ +  SLLILPL+LPPLPPPP MLL +P+ IM LL+ LA  PS
Sbjct: 78  VLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

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BLAST of Bhi03G002018 vs. ExPASy Swiss-Prot
Match: Q7X6L2 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica OX=39947 GN=ARGOS PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-06
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 1   MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPAEEHRVADGGGG 60
           +L+ V  SL+ILPLVLPPLPPPP ML+ VPV ++ LLL LA  P+   +     A GGGG
Sbjct: 107 LLVCVTASLVILPLVLPPLPPPPSMLMLVPVAMLVLLLALAFMPTTTSSSSS--AGGGGG 166

Query: 61  GSHNSA 67
           G  N A
Sbjct: 167 GGRNGA 170

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BLAST of Bhi03G002018 vs. ExPASy Swiss-Prot
Match: C7SFP6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARGOS PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 1.7e-04
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1   MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPS 46
           +L+ +  SLLILPLVLPPLPPPP MLL VP+ IM LL+ LA  PS
Sbjct: 79  ILVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLIILAFMPS 123

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BLAST of Bhi03G002018 vs. ExPASy Swiss-Prot
Match: Q6NMD6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3702 GN=ARGOS PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.2e-04
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1   MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPS 46
           +L+ +  SLLILPLVLPPLPPPP MLL VP+ IM LL+ LA  PS
Sbjct: 72  LLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPS 116

[Close]

BLAST of Bhi03G002018 vs. ExPASy Swiss-Prot
Match: Q8RWS1 (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=ORS1 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.2e-04
Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPA 50
          +L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Sbjct: 32 LLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPS 80

[Close]

BLAST of Bhi03G002018 vs. ExPASy Swiss-Prot
Match: Q8RXL7 (ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 3.7e-04
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1   MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPS 46
           +L+ +  SLLILPL+LPPLPPPP MLL +P+ IM LL+ LA  PS
Sbjct: 78  VLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

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BLAST of Bhi03G002018 vs. NCBI nr
Match: KAG6603314.1 (hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.1 bits (222), Expect = 7.6e-15
Identity = 56/66 (84.85%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPAEEHRVADGGGG 60
          MLIVVA SLLILPLVLPPLPPPPV+LLFVPVLIM  LLFLALSPS+VPAEEHRV   GGG
Sbjct: 13 MLIVVAASLLILPLVLPPLPPPPVLLLFVPVLIMFFLLFLALSPSEVPAEEHRVGADGGG 72

Query: 61 GSHNSA 67
          G H+SA
Sbjct: 73 G-HDSA 77

[Close]

BLAST of Bhi03G002018 vs. NCBI nr
Match: KAA0025988.1 (hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-13
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPAEEHRVADGGGG 60
          MLIV+AVSLLILPLVLPPLPPPPV+LLFVPVLIMSLLLFLALSPS+ PAE HR  D  GG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDSDGG 60

Query: 61 GSHNSA 67
            +NSA
Sbjct: 61 --YNSA 64

[Close]

BLAST of Bhi03G002018 vs. NCBI nr
Match: TYK04223.1 (hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 5.5e-13
Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPAEEHRVADGGGG 60
          MLIV+AVSLLILPLVLPPLPPPPV+LLFVPVLIMSLLLFLALSPS+ PAE HR  D  GG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 60

[Close]

BLAST of Bhi03G002018 vs. NCBI nr
Match: KAG2687345.1 (hypothetical protein I3760_09G047200 [Carya illinoinensis] >KAG6694413.1 hypothetical protein I3842_09G047400 [Carya illinoinensis] >KAG7962070.1 hypothetical protein I3843_09G047700 [Carya illinoinensis])

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-06
Identity = 35/48 (72.92%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVP 49
          +++V+ VSL++LPLV+PPLPPPP++LLFVPVLIMSLL+ LALSPSQ P
Sbjct: 13 VMVVLTVSLMVLPLVVPPLPPPPLLLLFVPVLIMSLLVVLALSPSQTP 60

[Close]

BLAST of Bhi03G002018 vs. NCBI nr
Match: RQO91248.1 (hypothetical protein POPTR_006G037801 [Populus trichocarpa])

HSP 1 Score: 60.1 bits (144), Expect = 8.4e-06
Identity = 34/48 (70.83%), Postives = 44/48 (91.67%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVP 49
          +++V+ V LL+LPLVLPPLPPPP++LLFVPV IMSLL+FLA SPS++P
Sbjct: 12 VMVVLTVFLLVLPLVLPPLPPPPLVLLFVPVFIMSLLVFLAFSPSKLP 59

[Close]

BLAST of Bhi03G002018 vs. ExPASy TrEMBL
Match: A0A0A0L0Y7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G432970 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.7e-15
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPAEEHRVADGG 59
          MLIVVAVSLLILPLVLPPLPPPPV+LLFVPVLIMSLLLFLALSPS+VPAEEH   DGG
Sbjct: 13 MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVPAEEHHETDGG 70

[Close]

BLAST of Bhi03G002018 vs. ExPASy TrEMBL
Match: A0A5A7SII5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003090 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.1e-14
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPAEEHRVADGGGG 60
          MLIV+AVSLLILPLVLPPLPPPPV+LLFVPVLIMSLLLFLALSPS+ PAE HR  D  GG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDSDGG 60

Query: 61 GSHNSA 67
            +NSA
Sbjct: 61 --YNSA 64

[Close]

BLAST of Bhi03G002018 vs. ExPASy TrEMBL
Match: A0A5D3BWW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24967G00300 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.6e-13
Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVPAEEHRVADGGGG 60
          MLIV+AVSLLILPLVLPPLPPPPV+LLFVPVLIMSLLLFLALSPS+ PAE HR  D  GG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 60

[Close]

BLAST of Bhi03G002018 vs. ExPASy TrEMBL
Match: A0A2N9F7M5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10977 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07
Identity = 36/48 (75.00%), Postives = 47/48 (97.92%), Query Frame = 0


Query: 1  MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVP 49
          +++++ VSLL+LPLVLPPLPPPP++LLFVPVL+MSLL+FLAL+PSQVP
Sbjct: 12 VMLLLTVSLLVLPLVLPPLPPPPLLLLFVPVLMMSLLVFLALTPSQVP 59

[Close]

BLAST of Bhi03G002018 vs. ExPASy TrEMBL
Match: A0A5B7AL58 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-06
Identity = 32/48 (66.67%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1   MLIVVAVSLLILPLVLPPLPPPPVMLLFVPVLIMSLLLFLALSPSQVP 49
           +++V+ VSLL+LP+VLPPLPPPP+MLLF+P+LIM++L+ LA SPSQ+P
Sbjct: 101 IMVVLTVSLLVLPVVLPPLPPPPLMLLFIPILIMAVLILLAFSPSQLP 148

The following BLAST results are available for this feature:

BLAST of Bhi03G002018 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41230.1	1.5e-05	57.14	unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bact...	[more]
AT3G59900.1	1.5e-05	66.67	auxin-regulated gene involved in organ size	[more]
AT2G44080.1	2.6e-05	62.22	ARGOS-like	[more]

BLAST of Bhi03G002018 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7X6L2	1.8e-06	54.55	Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japon...	[more]
C7SFP6	1.7e-04	66.67	Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. peki...	[more]
Q6NMD6	2.2e-04	66.67	Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3...	[more]
Q8RWS1	2.2e-04	57.14	Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=ORS1 PE=2 SV=1	[more]
Q8RXL7	3.7e-04	62.22	ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1	[more]

BLAST of Bhi03G002018 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603314.1	7.6e-15	84.85	hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0025988.1	1.9e-13	81.82	hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa]	[more]
TYK04223.1	5.5e-13	85.00	hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa]	[more]
KAG2687345.1	1.7e-06	72.92	hypothetical protein I3760_09G047200 [Carya illinoinensis] >KAG6694413.1 hypothe...	[more]
RQO91248.1	8.4e-06	70.83	hypothetical protein POPTR_006G037801 [Populus trichocarpa]	[more]

BLAST of Bhi03G002018 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0Y7	3.7e-15	91.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G432970 PE=4 SV=1	[more]
A0A5A7SII5	9.1e-14	81.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BWW3	2.6e-13	85.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2N9F7M5	1.7e-07	75.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10977 PE=4 SV=1	[more]
A0A5B7AL58	2.4e-06	66.67	Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38928:SF8	ARGOS7	coord: 1..53
None	No IPR available	PANTHER	PTHR38928	ARGOS7	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M002018	Bhi03M002018	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046622	positive regulation of organ growth
biological_process	GO:0009725	response to hormone
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus