Bhi03G002008 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G002008
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Basic helix-loop-helix transcription factor
Location	chr3: 57842539 .. 57843835 (+)
RNA-Seq Expression	Bhi03G002008
Synteny	Bhi03G002008

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTGATGATAAGTTAACGGCTTCAACCATTGTTGGTGTAAATGATCTGATGGCATCGAGGAGGCTGAACCACAATGCGAGCGAGCGCAATCGCCGAACGAAGATCAATCTTCTATTTTCTTCTCTTCGCTCTGTTCTTCCTCCTCACGATCAACGGGTAAGAACAAAAAAATTCCGTGATCAAAATCCGACGAATCGATCCAGGTCGGTGTAGCCTCTTTGTGAGAAAGAAAAGGAAACAAGAAAAATTTGATCTGAAATTATCGATTTTAAAAGATTTATATCACTACTAAATCTCAAAAACTTAAAAGCCCTATTTAGAGATTATTTACCTATAAATTCCTTACTTTCGTTATCCGTATTTGATTTTTGATTTTTAGTTTTTGAAAATTGTCTATAAACACACCTTCCATCTATAAATTTCTTACTTTATCATTTTTTTTTTTTTACCAATATTAGTTTTCAAAAATCAAGTTAAATTTTGAAAACTAAAGTAGTTTTAAAAACTTGTTTTTGTTTTTGAATTTGGTTAAGAATTCAACTTTTATATTTAAGAAAGACTTAGTTTTAAAAAACCATAAATAGAAAACGAAATGGTTATCAAATAGGATCATAGTTTTTGAAAATTAAGTCTATTTCCTCTCAATTTCTTATAATGATGTTGTTGAATTCTTAACCAAATTAAGAAAACAAAAATAAGTGTTTAAAAACTACTATTTTTAGTTTTCAATACGTGAATTGGTTTTTGAAGACCAAATCAACTTTTGAAAACTAAATAAAAAAGTAACTTTTAATAAACTTGTTTGTGTTTTTTGGAACTTGGCTAATGATTCAACTATTTTACTCGAAAGATGTAAACCATTTTAAAAAATGAGAGGAAATATGTTTAATTTTTAAAAACACAAAAACGACGAACTAGATACCAAACGGAACTTAAATGGATAATTGGAATTTGATTTATGCAGAAGAGATTAAGCAATCCAGCAACAGTTTCAGTTGCACTAAACTACATATCAAATCTACAAAAGCAAGTGGAGGAACTTGTTGAGAAGAAGAAACAGCTCATGATTTCGATGATTACGAGGAGATCACAAGAAGAAAGCAGCTCAAGCTTGTTGGCTGTTTCAACCAATAGCCTTAGTGAAACAGAAATTGTCCAAATAATTTCCACCTTTCATGGAATCCCTTTGTCTTGCATCTTGCTTGGTTTACAAGAAGATGGGCTTCACCCTCTTAATATTTCTTCATCTCTGTCCTTTGGAGGAAGAATCTTTTACTATTTACATCTTCAG

mRNA sequence

ATGGAAGTTGATGATAAGTTAACGGCTTCAACCATTGTTGGTGTAAATGATCTGATGGCATCGAGGAGGCTGAACCACAATGCGAGCGAGCGCAATCGCCGAACGAAGATCAATCTTCTATTTTCTTCTCTTCGCTCTGTTCTTCCTCCTCACGATCAACGGAAGAGATTAAGCAATCCAGCAACAGTTTCAGTTGCACTAAACTACATATCAAATCTACAAAAGCAAGTGGAGGAACTTGTTGAGAAGAAGAAACAGCTCATGATTTCGATGATTACGAGGAGATCACAAGAAGAAAGCAGCTCAAGCTTGTTGGCTGTTTCAACCAATAGCCTTAGTGAAACAGAAATTGTCCAAATAATTTCCACCTTTCATGGAATCCCTTTGTCTTGCATCTTGCTTGGTTTACAAGAAGATGGGCTTCACCCTCTTAATATTTCTTCATCTCTGTCCTTTGGAGGAAGAATCTTTTACTATTTACATCTTCAG

Coding sequence (CDS)

ATGGAAGTTGATGATAAGTTAACGGCTTCAACCATTGTTGGTGTAAATGATCTGATGGCATCGAGGAGGCTGAACCACAATGCGAGCGAGCGCAATCGCCGAACGAAGATCAATCTTCTATTTTCTTCTCTTCGCTCTGTTCTTCCTCCTCACGATCAACGGAAGAGATTAAGCAATCCAGCAACAGTTTCAGTTGCACTAAACTACATATCAAATCTACAAAAGCAAGTGGAGGAACTTGTTGAGAAGAAGAAACAGCTCATGATTTCGATGATTACGAGGAGATCACAAGAAGAAAGCAGCTCAAGCTTGTTGGCTGTTTCAACCAATAGCCTTAGTGAAACAGAAATTGTCCAAATAATTTCCACCTTTCATGGAATCCCTTTGTCTTGCATCTTGCTTGGTTTACAAGAAGATGGGCTTCACCCTCTTAATATTTCTTCATCTCTGTCCTTTGGAGGAAGAATCTTTTACTATTTACATCTTCAG

Protein sequence

MEVDDKLTASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQKQVEELVEKKKQLMISMITRRSQEESSSSLLAVSTNSLSETEIVQIISTFHGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ

Homology

[Close]

BLAST of Bhi03G002008 vs. TAIR 10
Match: AT3G56970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 72/158 (45.57%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 16  NDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQK 75
           N+ +  ++LNHNASER+RR KIN LFSSLRS LP  DQ K+LS P TVS +L YI  LQ+
Sbjct: 66  NNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPELQQ 125

Query: 76  QVEELVEKKKQLMISMITRRSQE--------ESSSSLLAVSTNSLSETEI-VQIIST-FH 135
           QV+ L++KK+++++ +  +R  E          +S L  VS   L + E+ VQ+ S+  H
Sbjct: 126 QVKRLIQKKEEILVRVSGQRDFELYDKQQPKAVASYLSTVSATRLGDNEVMVQVSSSKIH 185

Query: 136 GIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
              +S +L G++EDG   +++SSS S G R+FY LHLQ
Sbjct: 186 NFSISNVLGGIEEDGFVLVDVSSSRSQGERLFYTLHLQ 223

[Close]

BLAST of Bhi03G002008 vs. TAIR 10
Match: AT2G41240.1 (basic helix-loop-helix protein 100 )

HSP 1 Score: 110.9 bits (276), Expect = 9.6e-25
Identity = 73/154 (47.40%), Postives = 99/154 (64.29%), Query Frame = 0


Query: 22  RRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQKQVEELV 81
           ++LNHNASER RR KIN +FSSLRS LPP +Q K+LS  ATVS AL YI  LQ+QV++L+
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 82  EKKKQLMISMITRR----------SQEESSSSLLAVSTNSLSETEIVQIISTFHGIPLSC 141
           +KK++L   +  +R          S+E  +S    VS+  LSETE++  IS+      S 
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISSLQTEKCSF 181

Query: 142 --ILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             +L G++EDGL  +  SSS S G R+FY +HLQ
Sbjct: 182 GNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQ 215

[Close]

BLAST of Bhi03G002008 vs. TAIR 10
Match: AT3G56980.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 9.6e-25
Identity = 72/158 (45.57%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 16  NDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQK 75
           N+ +  ++LNHNASER+RR KIN LFSSLRS LP   Q K+LS PATVS +L YI  LQ+
Sbjct: 71  NNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPELQE 130

Query: 76  QVEELVEKKKQLMISMITRRSQE--------ESSSSLLAVSTNSLSETEI-VQIIST-FH 135
           QV++L++KK++L++ +  +R+ E          ++ +  VS   L + E+ VQI S+  H
Sbjct: 131 QVKKLIKKKEELLVQISGQRNTECYVKQPPKAVANYISTVSATRLGDNEVMVQISSSKIH 190

Query: 136 GIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
              +S +L GL+ED    +++SSS S G R+FY LHLQ
Sbjct: 191 NFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQ 228

[Close]

BLAST of Bhi03G002008 vs. TAIR 10
Match: AT2G41240.2 (basic helix-loop-helix protein 100 )

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-23
Identity = 73/154 (47.40%), Postives = 98/154 (63.64%), Query Frame = 0


Query: 22  RRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQKQVEELV 81
           ++LNHNASER RR KIN +FSSLRS LPP +Q K LS  ATVS AL YI  LQ+QV++L+
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQTK-LSVSATVSQALKYIPELQEQVKKLM 121

Query: 82  EKKKQLMISMITRR----------SQEESSSSLLAVSTNSLSETEIVQIISTFHGIPLSC 141
           +KK++L   +  +R          S+E  +S    VS+  LSETE++  IS+      S 
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISSLQTEKCSF 181

Query: 142 --ILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             +L G++EDGL  +  SSS S G R+FY +HLQ
Sbjct: 182 GNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQ 214

[Close]

BLAST of Bhi03G002008 vs. TAIR 10
Match: AT5G04150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 62/156 (39.74%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 18  LMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQKQV 77
           ++  ++LNHNASER+RR K+N L+SSLR++LP  DQ+++LS P TV+  + YI   ++++
Sbjct: 62  VVLEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQEL 121

Query: 78  EELVEKKKQLMISMITRRSQEE----------SSSSLLAVSTNSLSETEIVQIISTFHGI 137
           + L  +K++L+  +  +  QE+           SSS   ++ N L++TEI   I+T    
Sbjct: 122 QRLSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIATSKWT 181

Query: 138 PLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
            +S +LL L+E+GL+ +++SSS+S   RIFY LHLQ
Sbjct: 182 SVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. ExPASy Swiss-Prot
Match: Q9M1K1 (Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24
Identity = 72/158 (45.57%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 16  NDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQK 75
           N+ +  ++LNHNASER+RR KIN LFSSLRS LP  DQ K+LS P TVS +L YI  LQ+
Sbjct: 66  NNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPELQQ 125

Query: 76  QVEELVEKKKQLMISMITRRSQE--------ESSSSLLAVSTNSLSETEI-VQIIST-FH 135
           QV+ L++KK+++++ +  +R  E          +S L  VS   L + E+ VQ+ S+  H
Sbjct: 126 QVKRLIQKKEEILVRVSGQRDFELYDKQQPKAVASYLSTVSATRLGDNEVMVQVSSSKIH 185

Query: 136 GIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
              +S +L G++EDG   +++SSS S G R+FY LHLQ
Sbjct: 186 NFSISNVLGGIEEDGFVLVDVSSSRSQGERLFYTLHLQ 223

[Close]

BLAST of Bhi03G002008 vs. ExPASy Swiss-Prot
Match: Q9ZVB5 (Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 73/154 (47.40%), Postives = 99/154 (64.29%), Query Frame = 0


Query: 22  RRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQKQVEELV 81
           ++LNHNASER RR KIN +FSSLRS LPP +Q K+LS  ATVS AL YI  LQ+QV++L+
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 82  EKKKQLMISMITRR----------SQEESSSSLLAVSTNSLSETEIVQIISTFHGIPLSC 141
           +KK++L   +  +R          S+E  +S    VS+  LSETE++  IS+      S 
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISSLQTEKCSF 181

Query: 142 --ILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             +L G++EDGL  +  SSS S G R+FY +HLQ
Sbjct: 182 GNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQ 215

[Close]

BLAST of Bhi03G002008 vs. ExPASy Swiss-Prot
Match: Q9M1K0 (Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 72/158 (45.57%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 16  NDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQK 75
           N+ +  ++LNHNASER+RR KIN LFSSLRS LP   Q K+LS PATVS +L YI  LQ+
Sbjct: 71  NNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPELQE 130

Query: 76  QVEELVEKKKQLMISMITRRSQE--------ESSSSLLAVSTNSLSETEI-VQIIST-FH 135
           QV++L++KK++L++ +  +R+ E          ++ +  VS   L + E+ VQI S+  H
Sbjct: 131 QVKKLIKKKEELLVQISGQRNTECYVKQPPKAVANYISTVSATRLGDNEVMVQISSSKIH 190

Query: 136 GIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
              +S +L GL+ED    +++SSS S G R+FY LHLQ
Sbjct: 191 NFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQ 228

[Close]

BLAST of Bhi03G002008 vs. ExPASy Swiss-Prot
Match: Q9FYE6 (Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 62/156 (39.74%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 18  LMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQKQV 77
           ++  ++LNHNASER+RR K+N L+SSLR++LP  DQ+++LS P TV+  + YI   ++++
Sbjct: 62  VVLEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQEL 121

Query: 78  EELVEKKKQLMISMITRRSQEE----------SSSSLLAVSTNSLSETEIVQIISTFHGI 137
           + L  +K++L+  +  +  QE+           SSS   ++ N L++TEI   I+T    
Sbjct: 122 QRLSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIATSKWT 181

Query: 138 PLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
            +S +LL L+E+GL+ +++SSS+S   RIFY LHLQ
Sbjct: 182 SVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.3e-20
Identity = 66/153 (43.14%), Postives = 92/153 (60.13%), Query Frame = 0


Query: 22  RRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQKQVEELV 81
           R+L+HNA ER+RR ++N L+SSLR++LP  D  K+LS P TVS  L YI  LQKQVE L 
Sbjct: 69  RKLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKYIPELQKQVENLE 128

Query: 82  EKKKQLMISMITRRSQEESSSSLLA------VSTNSLSETEI---VQIISTFHG--IPLS 141
            KKK+L  +  T        S L++      VS   +++ EI   V ++S   G  +PLS
Sbjct: 129 RKKKELTTTSTTNCKPGVLGSQLMSEGMAPIVSATCINDMEIMVQVSLLSNVAGSVLPLS 188

Query: 142 CILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             +  L+ +GLH ++ S+S  FG R FY +HLQ
Sbjct: 189 KCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQ 221

[Close]

BLAST of Bhi03G002008 vs. NCBI nr
Match: XP_038882376.1 (transcription factor ORG2-like [Benincasa hispida])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MEVDDKLTASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNP 60
           MEVDDKLTASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNP
Sbjct: 1   MEVDDKLTASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNP 60

Query: 61  ATVSVALNYISNLQKQVEELVEKKKQLMISMITRRSQEESSSSLLAVSTNSLSETEIVQI 120
           ATVSVALNYISNLQKQVEELVEKKKQLMISMITRRSQEESSSSLLAVSTNSLSETEIVQI
Sbjct: 61  ATVSVALNYISNLQKQVEELVEKKKQLMISMITRRSQEESSSSLLAVSTNSLSETEIVQI 120

Query: 121 ISTFHGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
           ISTFHGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ
Sbjct: 121 ISTFHGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 163

[Close]

BLAST of Bhi03G002008 vs. NCBI nr
Match: CAN64266.1 (hypothetical protein VITISV_031510 [Vitis vinifera])

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-29
Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 8   TASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVAL 67
           T S  V  N  M  ++LNHNASER+RR KIN L+SSLRS+LP  DQ K+LS P+TVS  L
Sbjct: 53  TPSAAVSGNPTMV-KKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVL 112

Query: 68  NYISNLQKQVEELVEKKKQLMISMITRRS----QEES-----SSSLLAVSTNSLSETEIV 127
            YI  LQKQVE L++KK++L +S I+R+     QE+      +SSL AVS N LS+ EIV
Sbjct: 113 KYIPELQKQVERLIQKKEEL-LSKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIV 172

Query: 128 QIISTF--HGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             ISTF  H  PLS +LL L+EDGL  +N SS  SFGGR+FY LHLQ
Sbjct: 173 VQISTFKVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. NCBI nr
Match: XP_010653965.1 (PREDICTED: transcription factor ORG2 [Vitis vinifera] >XP_019077027.1 PREDICTED: transcription factor ORG2 [Vitis vinifera] >RVW92213.1 Transcription factor ORG2 [Vitis vinifera] >CBI30114.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-29
Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 8   TASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVAL 67
           T S  V  N  M  ++LNHNASER+RR KIN L+SSLRS+LP  DQ K+LS P+TVS  L
Sbjct: 53  TPSAAVSGNPTMV-KKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVL 112

Query: 68  NYISNLQKQVEELVEKKKQLMISMITRRS----QEES-----SSSLLAVSTNSLSETEIV 127
            YI  LQKQVE L++KK++L +S I+R+     QE+      +SSL AVS N LS+ EIV
Sbjct: 113 KYIPELQKQVERLIQKKEEL-LSKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIV 172

Query: 128 QIISTF--HGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             ISTF  H  PLS +LL L+EDGL  +N SS  SFGGR+FY LHLQ
Sbjct: 173 VQISTFKVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. NCBI nr
Match: RVW34500.1 (Transcription factor ORG2 [Vitis vinifera])

HSP 1 Score: 135.2 bits (339), Expect = 5.1e-28
Identity = 91/167 (54.49%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 8   TASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVAL 67
           T ST V  N  M  ++LNHNASER+RR KIN L+SS+RS+LP  DQ K+LS P+TVS  L
Sbjct: 53  TPSTAVSGNPTMV-KKLNHNASERDRRKKINSLYSSMRSLLPSADQAKKLSIPSTVSRVL 112

Query: 68  NYISNLQKQVEELVEKKKQLMISMITR-------RSQEESS--SSLLAVSTNSLSETEIV 127
            YI  LQ+QVE L++KK++  +S I+R        SQ   +  SSL AVS   LS+ EIV
Sbjct: 113 KYIPELQRQVERLIQKKEE-FLSKISREGDPIHLESQRNGTLGSSLSAVSARRLSDREIV 172

Query: 128 QIISTF--HGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             ISTF  H  PLS +LL L+EDGL  +N SS  SFGGR+FY LHLQ
Sbjct: 173 VQISTFNVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. NCBI nr
Match: XP_034693284.1 (transcription factor ORG2-like [Vitis riparia])

HSP 1 Score: 134.4 bits (337), Expect = 8.7e-28
Identity = 84/152 (55.26%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 22  RRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVALNYISNLQKQVEELV 81
           ++LNHNASER+RR KIN L+SSLRS+LP  DQ K+LS P+TVS  L YI  LQ+QVE L+
Sbjct: 66  KKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVLKYIPELQQQVERLI 125

Query: 82  EKKKQLM--------ISMITRRSQEESSSSLLAVSTNSLSETEIVQIISTF--HGIPLSC 141
           +KK++L+        I  + ++ +   +SSL AVS N LS+ EIV  ISTF  H  PLS 
Sbjct: 126 QKKEELLSKISRQGDIIHLEKQRKGTLASSLSAVSANRLSDREIVVQISTFKVHESPLSE 185

Query: 142 ILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
           +LL L EDGL  +N SS  SFGGR+FY LHLQ
Sbjct: 186 VLLNLGEDGLLVINASSFESFGGRVFYNLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. ExPASy TrEMBL
Match: D7TIN8 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g05300 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 7.7e-30
Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 8   TASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVAL 67
           T S  V  N  M  ++LNHNASER+RR KIN L+SSLRS+LP  DQ K+LS P+TVS  L
Sbjct: 53  TPSAAVSGNPTMV-KKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVL 112

Query: 68  NYISNLQKQVEELVEKKKQLMISMITRRS----QEES-----SSSLLAVSTNSLSETEIV 127
            YI  LQKQVE L++KK++L +S I+R+     QE+      +SSL AVS N LS+ EIV
Sbjct: 113 KYIPELQKQVERLIQKKEEL-LSKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIV 172

Query: 128 QIISTF--HGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             ISTF  H  PLS +LL L+EDGL  +N SS  SFGGR+FY LHLQ
Sbjct: 173 VQISTFKVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. ExPASy TrEMBL
Match: A0A438I684 (Transcription factor ORG2 OS=Vitis vinifera OX=29760 GN=ORG2_2 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 7.7e-30
Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 8   TASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVAL 67
           T S  V  N  M  ++LNHNASER+RR KIN L+SSLRS+LP  DQ K+LS P+TVS  L
Sbjct: 53  TPSAAVSGNPTMV-KKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVL 112

Query: 68  NYISNLQKQVEELVEKKKQLMISMITRRS----QEES-----SSSLLAVSTNSLSETEIV 127
            YI  LQKQVE L++KK++L +S I+R+     QE+      +SSL AVS N LS+ EIV
Sbjct: 113 KYIPELQKQVERLIQKKEEL-LSKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIV 172

Query: 128 QIISTF--HGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             ISTF  H  PLS +LL L+EDGL  +N SS  SFGGR+FY LHLQ
Sbjct: 173 VQISTFKVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. ExPASy TrEMBL
Match: A5C6G0 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_031510 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 7.7e-30
Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 8   TASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVAL 67
           T S  V  N  M  ++LNHNASER+RR KIN L+SSLRS+LP  DQ K+LS P+TVS  L
Sbjct: 53  TPSAAVSGNPTMV-KKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVL 112

Query: 68  NYISNLQKQVEELVEKKKQLMISMITRRS----QEES-----SSSLLAVSTNSLSETEIV 127
            YI  LQKQVE L++KK++L +S I+R+     QE+      +SSL AVS N LS+ EIV
Sbjct: 113 KYIPELQKQVERLIQKKEEL-LSKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIV 172

Query: 128 QIISTF--HGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             ISTF  H  PLS +LL L+EDGL  +N SS  SFGGR+FY LHLQ
Sbjct: 173 VQISTFKVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. ExPASy TrEMBL
Match: A0A438DGB9 (Transcription factor ORG2 OS=Vitis vinifera OX=29760 GN=ORG2_3 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.5e-28
Identity = 91/167 (54.49%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 8   TASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVAL 67
           T ST V  N  M  ++LNHNASER+RR KIN L+SS+RS+LP  DQ K+LS P+TVS  L
Sbjct: 53  TPSTAVSGNPTMV-KKLNHNASERDRRKKINSLYSSMRSLLPSADQAKKLSIPSTVSRVL 112

Query: 68  NYISNLQKQVEELVEKKKQLMISMITR-------RSQEESS--SSLLAVSTNSLSETEIV 127
            YI  LQ+QVE L++KK++  +S I+R        SQ   +  SSL AVS   LS+ EIV
Sbjct: 113 KYIPELQRQVERLIQKKEE-FLSKISREGDPIHLESQRNGTLGSSLSAVSARRLSDREIV 172

Query: 128 QIISTF--HGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
             ISTF  H  PLS +LL L+EDGL  +N SS  SFGGR+FY LHLQ
Sbjct: 173 VQISTFNVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQ 217

[Close]

BLAST of Bhi03G002008 vs. ExPASy TrEMBL
Match: A5C2W4 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_027441 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27
Identity = 85/166 (51.20%), Postives = 107/166 (64.46%), Query Frame = 0


Query: 8   TASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPATVSVAL 67
           T S  V  N  M  ++LNHNASER+RR KIN L+SS+RS+LP  DQ K+LS P+TVS  L
Sbjct: 53  TPSAAVSGNPTMV-KKLNHNASERDRRKKINSLYSSMRSLLPSADQXKKLSIPSTVSRVL 112

Query: 68  NYISNLQKQVEELVEKKKQLMISM--------ITRRSQEESSSSLLAVSTNSLSETEIVQ 127
            YI  LQ+QVE L++KK++ +  +        +  +      SSL AVS   LS+ EIV 
Sbjct: 113 KYIPELQRQVERLIQKKEEFLSKICREGDPIHLENQRNGTLGSSLSAVSARRLSDREIVV 172

Query: 128 IISTF--HGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 164
            ISTF  H  PLS +LL L+EDGL  +N SS  SFGGR+FY LHLQ
Sbjct: 173 QISTFNVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQ 217

The following BLAST results are available for this feature:

BLAST of Bhi03G002008 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56970.1	1.1e-25	45.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41240.1	9.6e-25	47.40	basic helix-loop-helix protein 100	[more]
AT3G56980.1	9.6e-25	45.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41240.2	4.0e-23	47.40	basic helix-loop-helix protein 100	[more]
AT5G04150.1	1.5e-22	39.74	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Bhi03G002008 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1K1	1.6e-24	45.57	Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1	[more]
Q9ZVB5	1.3e-23	47.40	Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=...	[more]
Q9M1K0	1.3e-23	45.57	Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1	[more]
Q9FYE6	2.2e-21	39.74	Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=...	[more]
A2WZ60	5.3e-20	43.14	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=399...	[more]

BLAST of Bhi03G002008 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882376.1	1.1e-78	100.00	transcription factor ORG2-like [Benincasa hispida]	[more]
CAN64266.1	1.6e-29	56.29	hypothetical protein VITISV_031510 [Vitis vinifera]	[more]
XP_010653965.1	1.6e-29	56.29	PREDICTED: transcription factor ORG2 [Vitis vinifera] >XP_019077027.1 PREDICTED:...	[more]
RVW34500.1	5.1e-28	54.49	Transcription factor ORG2 [Vitis vinifera]	[more]
XP_034693284.1	8.7e-28	55.26	transcription factor ORG2-like [Vitis riparia]	[more]

BLAST of Bhi03G002008 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
D7TIN8	7.7e-30	56.29	BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g05300 P...	[more]
A0A438I684	7.7e-30	56.29	Transcription factor ORG2 OS=Vitis vinifera OX=29760 GN=ORG2_2 PE=4 SV=1	[more]
A5C6G0	7.7e-30	56.29	BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_031510 PE=4 ...	[more]
A0A438DGB9	2.5e-28	54.49	Transcription factor ORG2 OS=Vitis vinifera OX=29760 GN=ORG2_3 PE=4 SV=1	[more]
A5C2W4	2.7e-27	51.20	BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_027441 PE=4 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..90
None	No IPR available	PANTHER	PTHR13935:SF41	TRANSCRIPTION FACTOR ORG2-RELATED	coord: 18..161
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 27..79 e-value: 3.1E-12 score: 56.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 22..74 e-value: 2.4E-13 score: 49.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 21..73 score: 15.059179
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 16..104 e-value: 4.5E-17 score: 63.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 20..94
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 18..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M002008	Bhi03M002008	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity