Bhi03G001972 (gene) Wax gourd (B227) v1

Overview
NameBhi03G001972
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionAcyl-CoA N-acyltransferase
Locationchr3: 55836983 .. 55837448 (+)
RNA-Seq ExpressionBhi03G001972
SyntenyBhi03G001972
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCCTGTGAGGATATTCGCTTGGCCGGAGATGAGGATTCCAATGGCGGCGGAGAAAATGACGACATCGGTGACGGAGTTGTCGTTACTGTTGAGGTTGATTCCGATGGCGGAGAAGTTTCGTTCACCGAGATCGGCGCCGGCGGTGATGTGTTGGCCGAGGAAGGTGGTTTGAATGTAGGTTTCGTGGCCACTTTGAACGGAAATTCCGGTGGTGGTGAAATGTGTGATGTAGCAATTTTGTATGGTTGTTCTTAATGAATTGATGATTGAAATTCCGCCGCCTCTGTAATTTGAATCCAATAGAAGGTCTCTGAAAGTGATGAACTCGTAACTATAAGATGAAAAAGAAGAACTGAGGTTTGAATCTTCCGTAGAGTTCATCACTTTATGGTTTTTAATTTTCTGCGCCGCCGCTCCCTCCGCCGCCGCCGACGGCGACGACGACAATTCGATCAGGTAA

mRNA sequence

ATGAATGCCTGTGAGGATATTCGCTTGGCCGGAGATGAGGATTCCAATGGCGGCGGAGAAAATGACGACATCGGTGACGGAGTTGTCGTTACTGTTGAGGTTGATTCCGATGGCGGAGAAGTTTCGTTCACCGAGATCGGCGCCGGCGGTGATGTGTTGGCCGAGGAAGGTGGTTTGAATGTAGGTTTCGTGGCCACTTTGAACGGAAATTCCGGTGGTGGTGAAATGTGTGATGTAGCAATTTTGTATGGTTATGAAAAAGAAGAACTGAGGTTTGAATCTTCCGTAGAGTTCATCACTTTATGGTTTTTAATTTTCTGCGCCGCCGCTCCCTCCGCCGCCGCCGACGGCGACGACGACAATTCGATCAGGTAA

Coding sequence (CDS)

ATGAATGCCTGTGAGGATATTCGCTTGGCCGGAGATGAGGATTCCAATGGCGGCGGAGAAAATGACGACATCGGTGACGGAGTTGTCGTTACTGTTGAGGTTGATTCCGATGGCGGAGAAGTTTCGTTCACCGAGATCGGCGCCGGCGGTGATGTGTTGGCCGAGGAAGGTGGTTTGAATGTAGGTTTCGTGGCCACTTTGAACGGAAATTCCGGTGGTGGTGAAATGTGTGATGTAGCAATTTTGTATGGTTATGAAAAAGAAGAACTGAGGTTTGAATCTTCCGTAGAGTTCATCACTTTATGGTTTTTAATTTTCTGCGCCGCCGCTCCCTCCGCCGCCGCCGACGGCGACGACGACAATTCGATCAGGTAA

Protein sequence

MNACEDIRLAGDEDSNGGGENDDIGDGVVVTVEVDSDGGEVSFTEIGAGGDVLAEEGGLNVGFVATLNGNSGGGEMCDVAILYGYEKEELRFESSVEFITLWFLIFCAAAPSAAADGDDDNSIR
Homology
[Close]
BLAST of Bhi03G001972 vs. NCBI nr
Match: GER33157.1 (acyl-CoA N-acyltransferase, partial [Striga asiatica])

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-05
Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 1  MNACEDIRLAGDEDSNGGGENDDIGDGVVVTVEVDSDGGEVSFTEIGAGGDVLAEEGGLN 60
          M +  DI LAGD DS  GGE+DD+G GVVV  EVDS  GE  F  + A   VLA+E   +
Sbjct: 1  MGSGYDIGLAGDGDSGDGGEDDDVGHGVVVAGEVDSGAGEGGFGGVVAVVGVLAKEATGD 60

Query: 61 VGFVATLNGNSGGGE 76
           GFVAT + +S GGE
Sbjct: 61 EGFVATADEDSLGGE 75

[Close]
BLAST of Bhi03G001972 vs. ExPASy TrEMBL
Match: A0A5A7PLF0 (Acyl-CoA N-acyltransferase (Fragment) OS=Striga asiatica OX=4170 GN=STAS_09285 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.7e-06
Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 1  MNACEDIRLAGDEDSNGGGENDDIGDGVVVTVEVDSDGGEVSFTEIGAGGDVLAEEGGLN 60
          M +  DI LAGD DS  GGE+DD+G GVVV  EVDS  GE  F  + A   VLA+E   +
Sbjct: 1  MGSGYDIGLAGDGDSGDGGEDDDVGHGVVVAGEVDSGAGEGGFGGVVAVVGVLAKEATGD 60

Query: 61 VGFVATLNGNSGGGE 76
           GFVAT + +S GGE
Sbjct: 61 EGFVATADEDSLGGE 75

The following BLAST results are available for this feature:
BLAST of Bhi03G001972 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G001972 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G001972 vs. NCBI nr
Match NameE-valueIdentityDescription
GER33157.11.6e-0553.33acyl-CoA N-acyltransferase, partial [Striga asiatica][more]
BLAST of Bhi03G001972 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7PLF07.7e-0653.33Acyl-CoA N-acyltransferase (Fragment) OS=Striga asiatica OX=4170 GN=STAS_09285 P... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001972Bhi03M001972mRNA