Bhi03G001951 (gene) Wax gourd (B227) v1

Overview
NameBhi03G001951
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr3: 54507228 .. 54507494 (-)
RNA-Seq ExpressionBhi03G001951
SyntenyBhi03G001951
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTAAGGATCATTGAGGCAGGGGTTGGTGCTGTTGCACCCATTTCATTAGGATTAAATGTAGTAAACTCAAAAGAGTTTGGAGGAAGGGATATTGATGACTCAGGTACCTCAACAATAGATTCTCTAAAAGTAGGAACTGTAGCTTCCAAAGTTACTGGAGCTTGTACTGAATCGAGCATGATTCTAGAAGTTGCCATGAGCGTGGATGGAGAAGACATGGCAAGGAGGAAGAAGAACGTGAAGAATAAAGTATCATGTTGA

mRNA sequence

ATGCAAGTAAGGATCATTGAGGCAGGGGTTGGTGCTGTTGCACCCATTTCATTAGGATTAAATGTAGTAAACTCAAAAGAGTTTGGAGGAAGGGATATTGATGACTCAGGTACCTCAACAATAGATTCTCTAAAAGTAGGAACTGTAGCTTCCAAAGTTACTGGAGCTTGTACTGAATCGAGCATGATTCTAGAAGTTGCCATGAGCGTGGATGGAGAAGACATGGCAAGGAGGAAGAAGAACGTGAAGAATAAAGTATCATGTTGA

Coding sequence (CDS)

ATGCAAGTAAGGATCATTGAGGCAGGGGTTGGTGCTGTTGCACCCATTTCATTAGGATTAAATGTAGTAAACTCAAAAGAGTTTGGAGGAAGGGATATTGATGACTCAGGTACCTCAACAATAGATTCTCTAAAAGTAGGAACTGTAGCTTCCAAAGTTACTGGAGCTTGTACTGAATCGAGCATGATTCTAGAAGTTGCCATGAGCGTGGATGGAGAAGACATGGCAAGGAGGAAGAAGAACGTGAAGAATAAAGTATCATGTTGA

Protein sequence

MQVRIIEAGVGAVAPISLGLNVVNSKEFGGRDIDDSGTSTIDSLKVGTVASKVTGACTESSMILEVAMSVDGEDMARRKKNVKNKVSC
Homology
[Close]
BLAST of Bhi03G001951 vs. NCBI nr
Match: KAE8649712.1 (hypothetical protein Csa_012861, partial [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 5.0e-14
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 7   EAGVGAVAPISLGLNVVNSKEFGGRDI--DDSGTSTIDSLKVGTV-ASKVTGACTESSMI 66
           +AG GA+API LG  ++NS E GGR+I  DDSGTS IDSLK+  V +S+V G C +SSM 
Sbjct: 22  DAGNGALAPIPLGSKLINSSEVGGREIDDDDSGTSAIDSLKLRMVDSSRVVGGCAKSSMP 81

Query: 67  LEVAMSVDGEDMARRKKNVKNKVS 88
           L VAM +DGEDMA RKKNVK   S
Sbjct: 82  LVVAMILDGEDMAMRKKNVKKTTS 105

[Close]
BLAST of Bhi03G001951 vs. NCBI nr
Match: KAE8649705.1 (hypothetical protein Csa_011947, partial [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.2e-07
Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 15 PISLGLNVVNSKEFGGRDI--DDSGTSTIDSLKVGTV-ASKVTGACTESSMILEVAMSVD 74
          P      ++NS E GGR+I  DDSGTS IDSLK+  V +S+V G C +SSM L VAM ++
Sbjct: 10 PFHWDQKLINSSEVGGREIDDDDSGTSAIDSLKLRMVDSSRVVGGCAKSSMPLVVAMILN 69

Query: 75 GEDMARRKKN 82
          GEDMA RKKN
Sbjct: 70 GEDMAMRKKN 79

[Close]
BLAST of Bhi03G001951 vs. NCBI nr
Match: KAG6581979.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.7 bits (156), Expect = 4.6e-07
Identity = 44/105 (41.90%), Postives = 52/105 (49.52%), Query Frame = 0 

Query: 6   IEAGVGAVAPISLGLNVVNSKEFGGRDIDDSGTST------------------------- 65
           +E G+GA+AP  LG  V    E GG  IDD GTST                         
Sbjct: 17  VEEGIGALAPTLLGSEVAKPSEVGGIQIDDLGTSTDVVGAFVVVNGALEGTKLDPFNKKG 76

Query: 66  -----IDSLKVGTVASKVTGACTESSMILEVAMSVDGEDMARRKK 81
                +D+L+VG VAS V  ACTESSM LEVA S + ED  +RKK
Sbjct: 77  WRSSAMDALEVGIVASNVVRACTESSMALEVATSEEEEDTVKRKK 121

The following BLAST results are available for this feature:
BLAST of Bhi03G001951 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G001951 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G001951 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649712.15.0e-1461.90hypothetical protein Csa_012861, partial [Cucumis sativus][more]
KAE8649705.11.2e-0757.14hypothetical protein Csa_011947, partial [Cucumis sativus][more]
KAG6581979.14.6e-0741.90OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1, partial [Cucurbita ar... [more]
BLAST of Bhi03G001951 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001951Bhi03M001951mRNA