Bhi03G001887 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G001887
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Proline-rich protein HaeIII subfamily 1-like
Location	chr3: 52079441 .. 52079887 (-)
RNA-Seq Expression	Bhi03G001887
Synteny	Bhi03G001887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTGATTAATCCTTCAAATGTGTTTTTCAGAGTTTGTGCTCTTATACTCTTTGGGATGCATTCTACATACTATCAAGCAGATGCTAGAAATGTTGTTGTAGTCGATCAAGACTATGTAGCTCCACCTTTCAGCTTAGGAATACTATCAAAAGAGGTACGGATTTCTCCATCTGGACCGAGTCAAAGAGCTTCAGACAATCCACCTCCTTTACCACATTTCCCACCAGTCATTTTACATAAGGAATCTAGGATCAACTTTGGAATATTACCAAAAGGCGTGCATATTCCTCCATCTGGGCCGAGTAAAAAAACTTTAGACAATCCACCACCTCCACCTCTTTCTCCTTCTGTTATTTTAAATAAAGAATCTAAGTTTAATTTTTTCATGTATCCTAGAACACCTATTCCACCATCTATTGCAAATGGACGAGTGCCATTATGA

mRNA sequence

ATGATGTTGATTAATCCTTCAAATGTGTTTTTCAGAGTTTGTGCTCTTATACTCTTTGGGATGCATTCTACATACTATCAAGCAGATGCTAGAAATGTTGTTGTAGTCGATCAAGACTATGTAGCTCCACCTTTCAGCTTAGGAATACTATCAAAAGAGGTACGGATTTCTCCATCTGGACCGAGTCAAAGAGCTTCAGACAATCCACCTCCTTTACCACATTTCCCACCAGTCATTTTACATAAGGAATCTAGGATCAACTTTGGAATATTACCAAAAGGCGTGCATATTCCTCCATCTGGGCCGAGTAAAAAAACTTTAGACAATCCACCACCTCCACCTCTTTCTCCTTCTGTTATTTTAAATAAAGAATCTAAGTTTAATTTTTTCATGTATCCTAGAACACCTATTCCACCATCTATTGCAAATGGACGAGTGCCATTATGA

Coding sequence (CDS)

ATGATGTTGATTAATCCTTCAAATGTGTTTTTCAGAGTTTGTGCTCTTATACTCTTTGGGATGCATTCTACATACTATCAAGCAGATGCTAGAAATGTTGTTGTAGTCGATCAAGACTATGTAGCTCCACCTTTCAGCTTAGGAATACTATCAAAAGAGGTACGGATTTCTCCATCTGGACCGAGTCAAAGAGCTTCAGACAATCCACCTCCTTTACCACATTTCCCACCAGTCATTTTACATAAGGAATCTAGGATCAACTTTGGAATATTACCAAAAGGCGTGCATATTCCTCCATCTGGGCCGAGTAAAAAAACTTTAGACAATCCACCACCTCCACCTCTTTCTCCTTCTGTTATTTTAAATAAAGAATCTAAGTTTAATTTTTTCATGTATCCTAGAACACCTATTCCACCATCTATTGCAAATGGACGAGTGCCATTATGA

Protein sequence

MMLINPSNVFFRVCALILFGMHSTYYQADARNVVVVDQDYVAPPFSLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGILPKGVHIPPSGPSKKTLDNPPPPPLSPSVILNKESKFNFFMYPRTPIPPSIANGRVPL

Homology

[Close]

BLAST of Bhi03G001887 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32
Identity = 85/172 (49.42%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 1   MMLINPSNVFFRVCALILFGMHSTYYQADARNVVVVDQ---------------------- 60
           M+ I+ SNVFF  CA I  G+HST YQ DA+NV VV++                      
Sbjct: 1   MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60

Query: 61  ---------DYVAPPFSLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFG 120
                      +APPF+LGILSKE R+ PSG SQ  SDNPPP PH   +ILHKESRINF 
Sbjct: 61  FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120

Query: 121 ILPKGVHIPPSGPSKKTLDNPPPPPLSPSVILNKESKFNFFMYPRT-PIPPS 141
           +L KG  IPPSGPS++T ++PPPPP + SVIL+K+   NF + P++  IPPS
Sbjct: 121 VLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPS 172

[Close]

BLAST of Bhi03G001887 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 4.3e-26
Identity = 78/166 (46.99%), Postives = 96/166 (57.83%), Query Frame = 0


Query: 7   SNVFFRVCALILFGMHSTYYQADARNVVVVDQDY-------------------------- 66
           +N+FFR CALI  G+H   Y  +A+   VVD+D                           
Sbjct: 6   TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHFSWPKP 65

Query: 67  -----VAPPFSLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGILPKGV 126
                +APPFSLGILSK +R  PSG SQ  S+NPP  PH  P+ILHKES +NFGILPKGV
Sbjct: 66  KKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPS-PHVAPIILHKESMVNFGILPKGV 125

Query: 127 HIPPSGPSKKTLDNPPPPPLSPSVILNKESKFNFFMYPR-TPIPPS 141
            IPPSGPS++T D  PPPPLS    + KES+  + + P+   IPPS
Sbjct: 126 RIPPSGPSRRTSD--PPPPLSNFHSI-KESRIKYGILPKGVRIPPS 167

[Close]

BLAST of Bhi03G001887 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-25
Identity = 66/99 (66.67%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 43  PPFSLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGILPKGVHIPPSGP 102
           PP  L +L K V ISPSGPSQR SD PPP P    VIL K+S+INFG+LPKGV IPPSGP
Sbjct: 77  PPVVLRMLPKGVPISPSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPKGVPIPPSGP 136

Query: 103 SKKTLDNPPPPPLSPSVILNKESKFNFFMYPR-TPIPPS 141
           S++T D PPPPP + SVILNK+SK NF M P+  PIPPS
Sbjct: 137 SQRTSDYPPPPPRASSVILNKQSKINFGMLPKGVPIPPS 175

[Close]

BLAST of Bhi03G001887 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])

HSP 1 Score: 118.6 bits (296), Expect = 4.5e-23
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 46  SLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGILPKGVHIPPSGPSKK 105
           +LG+L + V I PSGPSQR SD PPP PH   VIL+K+S+INFG+LPKGV IPPSGPS++
Sbjct: 281 NLGMLPRGVPIPPSGPSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQR 340

Query: 106 TLDNPPPPPLSPSVILNKESKFNFFMYPR-TPIPP 140
           T   PPPPP + SVILNK+SK    M PR  PIPP
Sbjct: 341 TSXYPPPPPRASSVILNKQSKIYLGMLPRGVPIPP 375

[Close]

BLAST of Bhi03G001887 vs. NCBI nr
Match: KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-20
Identity = 73/171 (42.69%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 2   MLINPSNVFFRVCALILFGMHSTYYQADARNVVVVDQD------------YVAPP----- 61
           M+   SN+ F+ CA++L G+H   YQ + RN+  V +D             + P      
Sbjct: 1   MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60

Query: 62  --------------FSLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGI 121
                         F  GI SK+VRI PSGPSQR+SD+PP     P +IL KESRINFGI
Sbjct: 61  SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPS----PSMILPKESRINFGI 120

Query: 122 LPKGVHIPPSGPSKKTLDNPPPPPLSPSVILNKESKFNFFMYPR-TPIPPS 141
           LPKG  IPPSGPS++  D+P P    PS  L+K S   F M P+   IPPS
Sbjct: 121 LPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPS 163

[Close]

BLAST of Bhi03G001887 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26
Identity = 78/166 (46.99%), Postives = 96/166 (57.83%), Query Frame = 0


Query: 7   SNVFFRVCALILFGMHSTYYQADARNVVVVDQDY-------------------------- 66
           +N+FFR CALI  G+H   Y  +A+   VVD+D                           
Sbjct: 6   TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHFSWPKP 65

Query: 67  -----VAPPFSLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGILPKGV 126
                +APPFSLGILSK +R  PSG SQ  S+NPP  PH  P+ILHKES +NFGILPKGV
Sbjct: 66  KKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPS-PHVAPIILHKESMVNFGILPKGV 125

Query: 127 HIPPSGPSKKTLDNPPPPPLSPSVILNKESKFNFFMYPR-TPIPPS 141
            IPPSGPS++T D  PPPPLS    + KES+  + + P+   IPPS
Sbjct: 126 RIPPSGPSRRTSD--PPPPLSNFHSI-KESRIKYGILPKGVRIPPS 167

[Close]

BLAST of Bhi03G001887 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-23
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 46  SLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGILPKGVHIPPSGPSKK 105
           +LG+L + V I PSGPSQR SD PPP PH   VIL+K+S+INFG+LPKGV IPPSGPS++
Sbjct: 281 NLGMLPRGVPIPPSGPSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQR 340

Query: 106 TLDNPPPPPLSPSVILNKESKFNFFMYPR-TPIPP 140
           T   PPPPP + SVILNK+SK    M PR  PIPP
Sbjct: 341 TSXYPPPPPRASSVILNKQSKIYLGMLPRGVPIPP 375

[Close]

BLAST of Bhi03G001887 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.9e-21
Identity = 73/171 (42.69%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 2   MLINPSNVFFRVCALILFGMHSTYYQADARNVVVVDQD------------YVAPP----- 61
           M+   SN+ F+ CA++L G+H   YQ + RN+  V +D             + P      
Sbjct: 1   MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60

Query: 62  --------------FSLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGI 121
                         F  GI SK+VRI PSGPSQR+SD+PP     P +IL KESRINFGI
Sbjct: 61  SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPS----PSMILPKESRINFGI 120

Query: 122 LPKGVHIPPSGPSKKTLDNPPPPPLSPSVILNKESKFNFFMYPR-TPIPPS 141
           LPKG  IPPSGPS++  D+P P    PS  L+K S   F M P+   IPPS
Sbjct: 121 LPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPS 163

[Close]

BLAST of Bhi03G001887 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.0e-17
Identity = 47/66 (71.21%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 41  VAPPFSLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGILPKGVHIPPS 100
           +APPFSLGILSK+VR  PSG SQR  DNP   PH  P+ILHK+SRI FGILPKGVH+P S
Sbjct: 167 LAPPFSLGILSKDVRTPPSGSSQRTLDNPSLPPHVVPIILHKKSRIEFGILPKGVHVPSS 226

Query: 101 GPSKKT 107
           GPS +T
Sbjct: 227 GPSVRT 232

[Close]

BLAST of Bhi03G001887 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 45/66 (68.18%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 41  VAPPFSLGILSKEVRISPSGPSQRASDNPPPLPHFPPVILHKESRINFGILPKGVHIPPS 100
           +APPFSLGIL K+VR  P G SQR  DNP P PH  P+ILHK+S+I FGILPKGV +PPS
Sbjct: 174 LAPPFSLGILLKDVRTPPFGSSQRTLDNPSPPPHAVPIILHKKSKIKFGILPKGVRVPPS 233

Query: 101 GPSKKT 107
           GPS +T
Sbjct: 234 GPSVRT 239

The following BLAST results are available for this feature:

BLAST of Bhi03G001887 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G001887 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G001887 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882352.1	2.4e-32	49.42	uncharacterized protein LOC120073615 [Benincasa hispida]	[more]
KAA0040932.1	4.3e-26	46.99	proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060...	[more]
KAG6603169.1	1.3e-25	66.67	hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022967687.1	4.5e-23	64.21	actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]	[more]
KAA0043502.1	1.2e-20	42.69	proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113...	[more]

BLAST of Bhi03G001887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CGG1	2.1e-26	46.99	Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1HRH7	2.2e-23	64.21	actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3...	[more]
A0A5D3BP86	5.9e-21	42.69	Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5D3BVE5	3.0e-17	71.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T8R0	1.5e-16	68.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001887	Bhi03M001887	mRNA