Bhi03G001834 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G001834
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Poly(A)-specific ribonuclease
Location	chr3: 50667331 .. 50668113 (+)
RNA-Seq Expression	Bhi03G001834
Synteny	Bhi03G001834

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAAGAAATCGAGCACGTTCGAGAAGAGAACCTTTGATTCGACAAGTTTGGGTTTCGAATTTCGATTCCAAAATCTCCAAATTCGATGAATGCCTTCGATCTCACTCAATTCTGTCTATCGACACAGAATTTGCTGGTTTTATCAGAAAATCTCCACGGGGTTTGATTGAAGAAGCCATTTACGATGACTTCCGATTCAATGTCAACCAAATGAAACTGATTCAATTGTGTATAACAACTTGTGATGATTCTGGTCATATCAGCGGCACATGGGATTTCAATTTCTCTGATTTCGACTCGGAAGCCGACGCTTAAGGCTCTTCTTTTGTTTCGTTTCTAGAACAGAACGACATCGATTTAAAAAAACTGAAGAAAGATGGAATGCCCATCAGATTATTTGTTGCATTCCTACCTATCATCCGAAAGCATAACGTTTTTAGATGGGTCACCTTCCATGAACTCTACGATATTGGGTATCTGATCAAAGCGATGGGTTTGATCACCGTCTTTCCAGAATCAATGGAGGAATTCGCGATAGTGGTGGTGAATGGGCTGGGAATTGTGAGGGATTTAAAACATATGGCTCGATTCTGTGAAGGATTAGAAGATAAGAAACTTGGGCTTCAAAGACTAGGGTATTTGCATAATCAAAAACGATTTGGATCGAAGCATAACGCTGGATCCGATAGTTTACTCACAGCTTCTGCGCATTTTGAGGTGATGCATCGATTTGATATGGATTCAGTGGTTTGTGATGGATTCTTATATAGTTTTTGA

mRNA sequence

ATGGGTAGAAGAAATCGAGCACGTTCGAGAAGAGAACCTTTGATTCGACAAGTTTGGGTTTCGAATTTCGATTCCAAAATCTCCAAATTCGATGAATGCCTTCGATCTCACTCAATTCTGTCTATCGACACAGAATTTGCTGGTTTTATCAGAAAATCTCCACGGGGTTTGATTGAAGAAGCCATTTACGATGACTTCCGATTCAATGTCAACCAAATGAAACTGATTCAATTGTGTATAACAACTTGTGATGATTCTGGCTCTTCTTTTGTTTCGTTTCTAGAACAGAACGACATCGATTTAAAAAAACTGAAGAAAGATGGAATGCCCATCAGATTATTTGTTGCATTCCTACCTATCATCCGAAAGCATAACGTTTTTAGATGGGTCACCTTCCATGAACTCTACGATATTGGGTATCTGATCAAAGCGATGGGTTTGATCACCGTCTTTCCAGAATCAATGGAGGAATTCGCGATAGTGGTGGTGAATGGGCTGGGAATTGTGAGGGATTTAAAACATATGGCTCGATTCTGTGAAGGATTAGAAGATAAGAAACTTGGGCTTCAAAGACTAGGGTATTTGCATAATCAAAAACGATTTGGATCGAAGCATAACGCTGGATCCGATAGTTTACTCACAGCTTCTGCGCATTTTGAGGTGATGCATCGATTTGATATGGATTCAGTGGTTTGTGATGGATTCTTATATAGTTTTTGA

Coding sequence (CDS)

ATGGGTAGAAGAAATCGAGCACGTTCGAGAAGAGAACCTTTGATTCGACAAGTTTGGGTTTCGAATTTCGATTCCAAAATCTCCAAATTCGATGAATGCCTTCGATCTCACTCAATTCTGTCTATCGACACAGAATTTGCTGGTTTTATCAGAAAATCTCCACGGGGTTTGATTGAAGAAGCCATTTACGATGACTTCCGATTCAATGTCAACCAAATGAAACTGATTCAATTGTGTATAACAACTTGTGATGATTCTGGCTCTTCTTTTGTTTCGTTTCTAGAACAGAACGACATCGATTTAAAAAAACTGAAGAAAGATGGAATGCCCATCAGATTATTTGTTGCATTCCTACCTATCATCCGAAAGCATAACGTTTTTAGATGGGTCACCTTCCATGAACTCTACGATATTGGGTATCTGATCAAAGCGATGGGTTTGATCACCGTCTTTCCAGAATCAATGGAGGAATTCGCGATAGTGGTGGTGAATGGGCTGGGAATTGTGAGGGATTTAAAACATATGGCTCGATTCTGTGAAGGATTAGAAGATAAGAAACTTGGGCTTCAAAGACTAGGGTATTTGCATAATCAAAAACGATTTGGATCGAAGCATAACGCTGGATCCGATAGTTTACTCACAGCTTCTGCGCATTTTGAGGTGATGCATCGATTTGATATGGATTCAGTGGTTTGTGATGGATTCTTATATAGTTTTTGA

Protein sequence

MGRRNRARSRREPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLIQLCITTCDDSGSSFVSFLEQNDIDLKKLKKDGMPIRLFVAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDMDSVVCDGFLYSF

Homology

[Close]

BLAST of Bhi03G001834 vs. TAIR 10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-27
Identity = 79/221 (35.75%), Postives = 120/221 (54.30%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N  ++++   +CL+  + ++IDTEF G ++++P    +E  Y D +FNV+   LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 77  QLCIT--------TCDDSGSSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFVA 136
           QL +T        T + + S F           ++FL+ N +DL K++++G+ I   F+ 
Sbjct: 64  QLGLTLFGKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFFME 123

Query: 137 FLPII-RKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLKH 196
           F  I+  KH   RWVTF   YD  YL+K +      PE+ +EF   V   LG  V D+K 
Sbjct: 124 FSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDVKK 183

Query: 197 MARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
           MA  C GL   + GLQR+  +   +R G  H+AGSDS LTA
Sbjct: 184 MAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTA 222

[Close]

BLAST of Bhi03G001834 vs. TAIR 10
Match: AT3G44240.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-27
Identity = 78/223 (34.98%), Postives = 119/223 (53.36%), Query Frame = 0


Query: 27  ISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLIQLCITTCDDS 86
           +S  ++CLRS+  ++IDTEF   +R++ +   +E  Y D  F+V++ KLIQL +T  D +
Sbjct: 1   MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDIN 60

Query: 87  G----------SSF----------VSFLEQNDIDLKKLKKDGMPIRLFVA--FLPIIRKH 146
           G          S F          + FL +N +DL+K++++G+ I  F +  F  + +  
Sbjct: 61  GRIGGTWEINFSDFGVDDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTR 120

Query: 147 NVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGIVRDLKHMARFCEGLED 206
               WVTFH  YDI YL+K        P + E F+  V   LG V DLK MA  CEGL  
Sbjct: 121 RNITWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL-S 180

Query: 207 KKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDM 228
            +LGL+ L +     R G+ H+AGS++ LTA    +V+  F +
Sbjct: 181 SRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPFPL 221

[Close]

BLAST of Bhi03G001834 vs. TAIR 10
Match: AT1G27890.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-26
Identity = 79/222 (35.59%), Postives = 113/222 (50.90%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N + ++    +CL+  S ++IDTEF G ++++P    EE  Y D +FNV+   LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 77  QLCITTCDDSG---------SSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFV 136
           QL  T  D  G         S F           ++FL+ N ++L K+ ++G+ I   F 
Sbjct: 63  QLGFTLFDRRGITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFR 122

Query: 137 AFLPIIR-KHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLK 196
            F  I++ K     WV F   YD  YL+K +      PE+ EEF   V   LG  V D+K
Sbjct: 123 DFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVK 182

Query: 197 HMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
            +A  C GL   + GLQR+  +   KR G  H+AGSDS LTA
Sbjct: 183 KIAESCSGL-SSRFGLQRIADVLQMKRVGKAHHAGSDSELTA 223

[Close]

BLAST of Bhi03G001834 vs. TAIR 10
Match: AT1G27820.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-26
Identity = 79/222 (35.59%), Postives = 114/222 (51.35%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N + +++   +CL+  S ++IDTEF G ++++P    EE  Y D +FNV+   LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 77  QLCITTCDDSG---------SSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFV 136
           QL  T  D  G         S F           ++FL+ N ++L K++++G+ I   F 
Sbjct: 68  QLGFTLFDRRGFAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFR 127

Query: 137 AFLPII-RKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLK 196
            F  I+  K     WV F   YD  YL+K +      PE+ EEF   V   LG  V D+K
Sbjct: 128 DFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVK 187

Query: 197 HMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
            +A  C GL   + GLQR+  +   KR G  H+AGSDS LTA
Sbjct: 188 KIAESCSGL-SSQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]

BLAST of Bhi03G001834 vs. TAIR 10
Match: AT1G15920.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21
Identity = 74/262 (28.24%), Postives = 120/262 (45.80%), Query Frame = 0


Query: 15  IRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRK--------SPRGLIEEAIYDDF 74
           IR+VW  N + +++  ++ +     +++DTEF G + K        +P  +  E  YD  
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 75  RFNVNQMKLIQLCITTCDDSGS----------------------------SFVSFLEQND 134
           + NVN +KLIQL +T  D+ G+                              +  L ++ 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSA 135

Query: 135 IDLKKLKKDGMPIRLFVAFL--PIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESME 194
           IDL+K  + G+  + F   L    +  ++   WVTFH  YD GYL+K +      PE + 
Sbjct: 136 IDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLS-GKELPEEIS 195

Query: 195 EFAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 238
           +F   +     +V D+K++  FC  L     GL+++  L   KR G  H AGSDSLLT  
Sbjct: 196 DFFDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTLR 255

[Close]

BLAST of Bhi03G001834 vs. ExPASy Swiss-Prot
Match: O64773 (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-26
Identity = 79/221 (35.75%), Postives = 120/221 (54.30%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N  ++++   +CL+  + ++IDTEF G ++++P    +E  Y D +FNV+   LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 77  QLCIT--------TCDDSGSSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFVA 136
           QL +T        T + + S F           ++FL+ N +DL K++++G+ I   F+ 
Sbjct: 64  QLGLTLFGKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFFME 123

Query: 137 FLPII-RKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLKH 196
           F  I+  KH   RWVTF   YD  YL+K +      PE+ +EF   V   LG  V D+K 
Sbjct: 124 FSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDVKK 183

Query: 197 MARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
           MA  C GL   + GLQR+  +   +R G  H+AGSDS LTA
Sbjct: 184 MAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTA 222

[Close]

BLAST of Bhi03G001834 vs. ExPASy Swiss-Prot
Match: Q9LXM4 (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-26
Identity = 78/223 (34.98%), Postives = 119/223 (53.36%), Query Frame = 0


Query: 27  ISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLIQLCITTCDDS 86
           +S  ++CLRS+  ++IDTEF   +R++ +   +E  Y D  F+V++ KLIQL +T  D +
Sbjct: 1   MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDIN 60

Query: 87  G----------SSF----------VSFLEQNDIDLKKLKKDGMPIRLFVA--FLPIIRKH 146
           G          S F          + FL +N +DL+K++++G+ I  F +  F  + +  
Sbjct: 61  GRIGGTWEINFSDFGVDDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTR 120

Query: 147 NVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGIVRDLKHMARFCEGLED 206
               WVTFH  YDI YL+K        P + E F+  V   LG V DLK MA  CEGL  
Sbjct: 121 RNITWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL-S 180

Query: 207 KKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDM 228
            +LGL+ L +     R G+ H+AGS++ LTA    +V+  F +
Sbjct: 181 SRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPFPL 221

[Close]

BLAST of Bhi03G001834 vs. ExPASy Swiss-Prot
Match: Q9SFX6 (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=CAF1-3 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.0e-25
Identity = 79/222 (35.59%), Postives = 114/222 (51.35%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N + +++   +CL+  S ++IDTEF G ++++P    EE  Y D +FNV+   LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 77  QLCITTCDDSG---------SSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFV 136
           QL  T  D  G         S F           ++FL+ N ++L K++++G+ I   F 
Sbjct: 68  QLGFTLFDRRGFAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFR 127

Query: 137 AFLPII-RKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLK 196
            F  I+  K     WV F   YD  YL+K +      PE+ EEF   V   LG  V D+K
Sbjct: 128 DFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVK 187

Query: 197 HMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
            +A  C GL   + GLQR+  +   KR G  H+AGSDS LTA
Sbjct: 188 KIAESCSGL-SSQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]

BLAST of Bhi03G001834 vs. ExPASy Swiss-Prot
Match: Q9C6M9 (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=CAF1-4 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.0e-25
Identity = 79/222 (35.59%), Postives = 113/222 (50.90%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N + ++    +CL+  S ++IDTEF G ++++P    EE  Y D +FNV+   LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 77  QLCITTCDDSG---------SSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFV 136
           QL  T  D  G         S F           ++FL+ N ++L K+ ++G+ I   F 
Sbjct: 63  QLGFTLFDRRGITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFR 122

Query: 137 AFLPIIR-KHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLK 196
            F  I++ K     WV F   YD  YL+K +      PE+ EEF   V   LG  V D+K
Sbjct: 123 DFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVK 182

Query: 197 HMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
            +A  C GL   + GLQR+  +   KR G  H+AGSDS LTA
Sbjct: 183 KIAESCSGL-SSRFGLQRIADVLQMKRVGKAHHAGSDSELTA 223

[Close]

BLAST of Bhi03G001834 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-20
Identity = 74/262 (28.24%), Postives = 120/262 (45.80%), Query Frame = 0


Query: 15  IRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRK--------SPRGLIEEAIYDDF 74
           IR+VW  N + +++  ++ +     +++DTEF G + K        +P  +  E  YD  
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 75  RFNVNQMKLIQLCITTCDDSGS----------------------------SFVSFLEQND 134
           + NVN +KLIQL +T  D+ G+                              +  L ++ 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSA 135

Query: 135 IDLKKLKKDGMPIRLFVAFL--PIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESME 194
           IDL+K  + G+  + F   L    +  ++   WVTFH  YD GYL+K +      PE + 
Sbjct: 136 IDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLS-GKELPEEIS 195

Query: 195 EFAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 238
           +F   +     +V D+K++  FC  L     GL+++  L   KR G  H AGSDSLLT  
Sbjct: 196 DFFDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTLR 255

[Close]

BLAST of Bhi03G001834 vs. NCBI nr
Match: XP_038895744.1 (putative CCR4-associated factor 1 homolog 8 [Benincasa hispida])

HSP 1 Score: 329.3 bits (843), Expect = 2.7e-86
Identity = 167/251 (66.53%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 11  REPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNV 70
           R+ LI +VW SNFD++ISK +ECL  H+I+SIDTEF GFIR SP G I+E +Y+DFRFNV
Sbjct: 7   RKSLIHKVWASNFDAEISKLEECLEFHTIVSIDTEFPGFIRNSPWGSIDETLYEDFRFNV 66

Query: 71  NQMKLIQLCITTCDDSGS---------------------SFVSFLEQNDIDLKKLKKDGM 130
           NQ KLIQL +T CDDSG                      S  SFLEQN +D  KLKK G+
Sbjct: 67  NQTKLIQLGLTACDDSGKIGGSWEFNFSDFDPEIDAQSPSSASFLEQNGLDFNKLKKYGI 126

Query: 131 PIRLFVA-FLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGI 190
           PI LF A F+ IIRKHNVFRWVTFH LYDIGYLIKAMG+  V PE+MEEFA VVV  LGI
Sbjct: 127 PINLFTAKFVHIIRKHNVFRWVTFHGLYDIGYLIKAMGITEVLPETMEEFATVVVRRLGI 186

Query: 191 VRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDMD 240
           VRDLKHMARFCEGLED KLGL+RLG L +QKR+G KHNAGSDSLLTASAHFE++ RFDMD
Sbjct: 187 VRDLKHMARFCEGLEDGKLGLERLGKLLDQKRYGLKHNAGSDSLLTASAHFEMIQRFDMD 246

[Close]

BLAST of Bhi03G001834 vs. NCBI nr
Match: XP_031736916.1 (putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypothetical protein Csa_006644 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 3.0e-85
Identity = 173/263 (65.78%), Postives = 200/263 (76.05%), Query Frame = 0


Query: 1   MGRRNRARSRRE-PLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MG RN+ RS RE PLIRQVW SNFDS+I++FDECLR H+IL+IDTEF GFI +SPRG I+
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSG----------SSF-----------VSFLEQND 120
           + +Y DF FNVNQ KLIQL IT  DD G          S F           + FLE N 
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 IDLKKLKKDGMPIRLFV-AFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEE 180
           +DLKK+KKDG+PI  F   FLPI+RK ++FRWVTFH LYDIGYLIKAMGLITV P+SMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FAIVVVNGLGIVRDLKHMARFCEGLEDK-KLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 240
           FA VVVN +GIVRDLKHMA+FCEGL+D  +LGL+RLG L N KRFG KHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

[Close]

BLAST of Bhi03G001834 vs. NCBI nr
Match: KAA0045730.1 (putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa] >TYJ99550.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 323.6 bits (828), Expect = 1.5e-84
Identity = 170/263 (64.64%), Postives = 199/263 (75.67%), Query Frame = 0


Query: 1   MGRRNRARSRR--EPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLI 60
           MG RN+ RSRR  +P IRQVW SNF+S+I++FDECLR H+IL+IDTEF GFI +SPR  I
Sbjct: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITQFDECLRFHTILTIDTEFPGFIIQSPRDSI 60

Query: 61  EEAIYDDFRFNVNQMKLIQLCITTCDDSGS---------------------SFVSFLEQN 120
           +E IY +FRFNVNQMKLIQL IT  +D G                      S + FLE+N
Sbjct: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDSHSPSAIPFLEKN 120

Query: 121 DIDLKKLKKDGMPIRLFV-AFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESME 180
            +D KKLKK G+PI  F   FLPII+K ++FRWVTFH LYDIGYLIKAMGLITV P+SME
Sbjct: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180

Query: 181 EFAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 240
           EFA +VVN +GIVRDLKHMARFCEGLED +LGL+RLG + N+KRFG KHNAGSDSLLTAS
Sbjct: 181 EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS 240

[Close]

BLAST of Bhi03G001834 vs. NCBI nr
Match: XP_038877840.1 (putative CCR4-associated factor 1 homolog 8, partial [Benincasa hispida])

HSP 1 Score: 284.3 bits (726), Expect = 1.0e-72
Identity = 151/190 (79.47%), Postives = 153/190 (80.53%), Query Frame = 0


Query: 1   MGRRNRARSRREPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEE 60
           MGRRNRAR RREPLIRQVW SNFDS+ISKFDECLR HSILSIDTEF GFIRKSPRG IEE
Sbjct: 1   MGRRNRARPRREPLIRQVWASNFDSEISKFDECLRLHSILSIDTEFPGFIRKSPRGSIEE 60

Query: 61  AIYDDFRFNVNQMKLIQLCITTCDDS---------------------GSSFVSFLEQNDI 120
           AIYDDFRFNVNQ KLIQL IT CDDS                     G+S VSFLEQN I
Sbjct: 61  AIYDDFRFNVNQTKLIQLGITACDDSGHIGGTWEFNFSDFDSEADAQGTSSVSFLEQNGI 120

Query: 121 DLKKLKKDGMPIRLFVA-FLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEF 169
           D KKLKKDGMPIRLF A FLPIIRKHNVFRWVTFH LYDIGYLIKAMGLITV PESMEEF
Sbjct: 121 DFKKLKKDGMPIRLFAANFLPIIRKHNVFRWVTFHGLYDIGYLIKAMGLITVLPESMEEF 180

[Close]

BLAST of Bhi03G001834 vs. NCBI nr
Match: XP_022146113.1 (putative CCR4-associated factor 1 homolog 8 [Momordica charantia])

HSP 1 Score: 268.1 bits (684), Expect = 7.4e-68
Identity = 144/261 (55.17%), Postives = 179/261 (68.58%), Query Frame = 0


Query: 1   MGRRNRARSRR-EPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MGR  R  SRR    IR+VW  NFD +++  ++CL  + IL+IDTEF GFIR +P G IE
Sbjct: 1   MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIE 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSG---------------------SSFVSFLEQND 120
           E +YDDFRFNVN+ KLIQL +T  D+ G                     +S VSFL+QN 
Sbjct: 61  EKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNG 120

Query: 121 IDLKKLKKDGMPIRLFV--AFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESME 180
           +D  KLK+ G+PI  F   AF  + RKH + RWVTFH LYDIGYL+KAMG+    PESME
Sbjct: 121 LDFDKLKEFGIPINEFTSKAFF-LFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESME 180

Query: 181 EFAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 238
           EFA +V   LG V DLKHMA+FCEGLED KLGL++L  L NQKRFG+KH+AGSDSLLTAS
Sbjct: 181 EFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTAS 240

[Close]

BLAST of Bhi03G001834 vs. ExPASy TrEMBL
Match: A0A0A0LPP0 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.4e-85
Identity = 173/263 (65.78%), Postives = 200/263 (76.05%), Query Frame = 0


Query: 1   MGRRNRARSRRE-PLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MG RN+ RS RE PLIRQVW SNFDS+I++FDECLR H+IL+IDTEF GFI +SPRG I+
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSG----------SSF-----------VSFLEQND 120
           + +Y DF FNVNQ KLIQL IT  DD G          S F           + FLE N 
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 IDLKKLKKDGMPIRLFV-AFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEE 180
           +DLKK+KKDG+PI  F   FLPI+RK ++FRWVTFH LYDIGYLIKAMGLITV P+SMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FAIVVVNGLGIVRDLKHMARFCEGLEDK-KLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 240
           FA VVVN +GIVRDLKHMA+FCEGL+D  +LGL+RLG L N KRFG KHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

[Close]

BLAST of Bhi03G001834 vs. ExPASy TrEMBL
Match: A0A5A7TRG1 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001200 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 7.2e-85
Identity = 170/263 (64.64%), Postives = 199/263 (75.67%), Query Frame = 0


Query: 1   MGRRNRARSRR--EPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLI 60
           MG RN+ RSRR  +P IRQVW SNF+S+I++FDECLR H+IL+IDTEF GFI +SPR  I
Sbjct: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITQFDECLRFHTILTIDTEFPGFIIQSPRDSI 60

Query: 61  EEAIYDDFRFNVNQMKLIQLCITTCDDSGS---------------------SFVSFLEQN 120
           +E IY +FRFNVNQMKLIQL IT  +D G                      S + FLE+N
Sbjct: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDSHSPSAIPFLEKN 120

Query: 121 DIDLKKLKKDGMPIRLFV-AFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESME 180
            +D KKLKK G+PI  F   FLPII+K ++FRWVTFH LYDIGYLIKAMGLITV P+SME
Sbjct: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180

Query: 181 EFAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 240
           EFA +VVN +GIVRDLKHMARFCEGLED +LGL+RLG + N+KRFG KHNAGSDSLLTAS
Sbjct: 181 EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS 240

[Close]

BLAST of Bhi03G001834 vs. ExPASy TrEMBL
Match: A0A6J1CXP9 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111015407 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.6e-68
Identity = 144/261 (55.17%), Postives = 179/261 (68.58%), Query Frame = 0


Query: 1   MGRRNRARSRR-EPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MGR  R  SRR    IR+VW  NFD +++  ++CL  + IL+IDTEF GFIR +P G IE
Sbjct: 1   MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIE 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSG---------------------SSFVSFLEQND 120
           E +YDDFRFNVN+ KLIQL +T  D+ G                     +S VSFL+QN 
Sbjct: 61  EKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNG 120

Query: 121 IDLKKLKKDGMPIRLFV--AFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESME 180
           +D  KLK+ G+PI  F   AF  + RKH + RWVTFH LYDIGYL+KAMG+    PESME
Sbjct: 121 LDFDKLKEFGIPINEFTSKAFF-LFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESME 180

Query: 181 EFAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 238
           EFA +V   LG V DLKHMA+FCEGLED KLGL++L  L NQKRFG+KH+AGSDSLLTAS
Sbjct: 181 EFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTAS 240

[Close]

BLAST of Bhi03G001834 vs. ExPASy TrEMBL
Match: A0A6J1G7L2 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451625 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.5e-66
Identity = 139/260 (53.46%), Postives = 177/260 (68.08%), Query Frame = 0


Query: 1   MGRRNRARSRRE-PLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MGRRNR R RR  P I++VW SNFD +I + + CL+++ ILSIDTEF G IR +P G I+
Sbjct: 1   MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSID 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSGS---------------------SFVSFLEQND 120
           E +Y+D RFNVNQ KLIQL +T  D+SG                      S ++FLEQN 
Sbjct: 61  ERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNG 120

Query: 121 IDLKKLKKDGMPIRLF-VAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEE 180
           +D  KLKK G+P+ LF + F  IIR+  V +WVTFH LYDIGYL+KAMG+    PESMEE
Sbjct: 121 LDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEE 180

Query: 181 FAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASA 238
           FA +V  G+G+VRDLK +AR+CEGLE  ++GL+RLG L  +KRFG KH+AGSDSLLTA  
Sbjct: 181 FAEMVARGVGVVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFV 240

[Close]

BLAST of Bhi03G001834 vs. ExPASy TrEMBL
Match: A0A6J1G7T4 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451626 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.4e-64
Identity = 130/259 (50.19%), Postives = 172/259 (66.41%), Query Frame = 0


Query: 1   MGRRNRARSRREPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEE 60
           M R  R      PLIR+VW  N D +I + D CL S+SI+SIDTEF G I+++P G  +E
Sbjct: 1   MDRIVRGPRGDNPLIREVWAYNLDHEIIRLDRCLLSYSIMSIDTEFPGCIKRTPWGTFDE 60

Query: 61  AIYDDFRFNVNQMKLIQLCITTCDDSGS---------------------SFVSFLEQNDI 120
            +Y DFRFNVNQ K+IQL +T  D+SG+                     + + FL+QN +
Sbjct: 61  ELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGL 120

Query: 121 DLKKLKKDGMPIRLF-VAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEF 180
           D  KLKKDG+ +R F + FL  + KH ++RWVTFH LYDIGYL+ AMG++   PE++ EF
Sbjct: 121 DFGKLKKDGIKVRKFAIRFLYTLGKHAIYRWVTFHGLYDIGYLMLAMGVVKSLPETLGEF 180

Query: 181 AIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAH 238
             +V   +G VRDLKHMARFCEGLE   LGL++LG L +QKRFG KH+AGSDSL+TA  H
Sbjct: 181 KWIVARRVGTVRDLKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTALLH 240

The following BLAST results are available for this feature:

BLAST of Bhi03G001834 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61470.1	2.3e-27	35.75	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44240.1	2.3e-27	34.98	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27890.1	5.7e-26	35.59	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27820.1	5.7e-26	35.59	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G15920.2	1.1e-21	28.24	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of Bhi03G001834 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64773	3.3e-26	35.75	Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LXM4	3.3e-26	34.98	Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SFX6	8.0e-25	35.59	Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9C6M9	8.0e-25	35.59	Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9S9P2	1.6e-20	28.24	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Bhi03G001834 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895744.1	2.7e-86	66.53	putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]	[more]
XP_031736916.1	3.0e-85	65.78	putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypoth...	[more]
KAA0045730.1	1.5e-84	64.64	putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa] >TYJ...	[more]
XP_038877840.1	1.0e-72	79.47	putative CCR4-associated factor 1 homolog 8, partial [Benincasa hispida]	[more]
XP_022146113.1	7.4e-68	55.17	putative CCR4-associated factor 1 homolog 8 [Momordica charantia]	[more]

BLAST of Bhi03G001834 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPP0	1.4e-85	65.78	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=3 SV...	[more]
A0A5A7TRG1	7.2e-85	64.64	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1CXP9	3.6e-68	55.17	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111015407 PE=...	[more]
A0A6J1G7L2	1.5e-66	53.46	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451625 PE=3...	[more]
A0A6J1G7T4	2.4e-64	50.19	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451626 PE=3...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 4..88 e-value: 1.3E-13 score: 52.5 coord: 89..239 e-value: 2.1E-25 score: 91.2
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 13..88 coord: 91..238
None	No IPR available	PANTHER	PTHR10797:SF57	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 3-RELATED	coord: 13..88 coord: 91..238
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 10..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001834	Bhi03M001834	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity