Bhi03G001606 (gene) Wax gourd (B227) v1

Overview
NameBhi03G001606
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionCtenidin-1-like
Locationchr3: 44140167 .. 44140436 (-)
RNA-Seq ExpressionBhi03G001606
SyntenyBhi03G001606
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGAACCGTTTATTATAATCCCAGTGGTTTTTGTTTCCGTTTGTGTAGTTTTAACGGTGTTGAGTTTACTTTGCTGGACAGCTGGTGGCAGTTCCAGCGGCGGAGGACGTGCTTATTTCAGCGGAGCTGGTCATGGTGGAGGATTCCATCATCACCATGGAGATGCCGGCGGTCACCACGCAGCAGGTCATTTTGGAGGTGGAGGACACGATTGTGGAGGTGCCGGCGGAGGCGGTGGTGGAGGCGGCGGTGTCTCTGCCTGTTGA

mRNA sequence

ATGGTTGAACCGTTTATTATAATCCCAGTGGTTTTTGTTTCCGTTTGTGTAGTTTTAACGGTGTTGAGTTTACTTTGCTGGACAGCTGGTGGCAGTTCCAGCGGCGGAGGACGTGCTTATTTCAGCGGAGCTGGTCATGGTGGAGGATTCCATCATCACCATGGAGATGCCGGCGGTCACCACGCAGCAGGTCATTTTGGAGGTGGAGGACACGATTGTGGAGGTGCCGGCGGAGGCGGTGGTGGAGGCGGCGGTGTCTCTGCCTGTTGA

Coding sequence (CDS)

ATGGTTGAACCGTTTATTATAATCCCAGTGGTTTTTGTTTCCGTTTGTGTAGTTTTAACGGTGTTGAGTTTACTTTGCTGGACAGCTGGTGGCAGTTCCAGCGGCGGAGGACGTGCTTATTTCAGCGGAGCTGGTCATGGTGGAGGATTCCATCATCACCATGGAGATGCCGGCGGTCACCACGCAGCAGGTCATTTTGGAGGTGGAGGACACGATTGTGGAGGTGCCGGCGGAGGCGGTGGTGGAGGCGGCGGTGTCTCTGCCTGTTGA

Protein sequence

MVEPFIIIPVVFVSVCVVLTVLSLLCWTAGGSSSGGGRAYFSGAGHGGGFHHHHGDAGGHHAAGHFGGGGHDCGGAGGGGGGGGGVSAC
Homology
BLAST of Bhi03G001606 vs. NCBI nr
Match: KGN54298.1 (hypothetical protein Csa_017993 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-12
Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 0

Query: 1  MVEPFIIIPVVFVSVCVVLTVLSLLCWTAGGSSSGGGRAYFSGAGHGGGFHHHHGDAGGH 60
          M +PF+I+P+VFVSV V+ TVLS +CWT+G SSSGGG A+F GA H GGFHHH G    H
Sbjct: 1  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHH 60

Query: 61 HAAGHFGGGGHDCGGAGGGGGGGGGVSAC 90
           A  H GGGGH CG  GG GGGGG  SAC
Sbjct: 61 VAVAHSGGGGHGCG--GGAGGGGGSSSAC 87

BLAST of Bhi03G001606 vs. NCBI nr
Match: XP_011654372.1 (glycine-rich protein DOT1 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-12
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0

Query: 1  MVEPFIIIPVVFVSVCVVLTVLSLLCWTAGGSSSGGGRAYFSGAGHGGGFHHHHGDAGGH 60
          M +PF+I+P+VFVSV V+ TVLS +CWT+G SSSGGG A+F GA H GGFHHH G    H
Sbjct: 1  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHH 60

Query: 61 HAAGHFGGGGHDCGGAGGGGGG 83
           A  H GGGGH CGG  GGGGG
Sbjct: 61 VAVAHSGGGGHGCGGGAGGGGG 82

BLAST of Bhi03G001606 vs. NCBI nr
Match: KAG6581831.1 (hypothetical protein SDJN03_21833, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-12
Identity = 65/91 (71.43%), Postives = 71/91 (78.02%), Query Frame = 0

Query: 1  MVEP-FIIIPVVFVSVCVVLTVLSLLC-WTAGGSSSGGGRAYFSGAGHGGGFHHHHGDAG 60
          MV+P FIIIPVVF+S+CVV TVLSLLC  TAGG++SGGG A+F GA H GG HH H  A 
Sbjct: 1  MVDPAFIIIPVVFLSICVVFTVLSLLCRGTAGGTTSGGG-AHFGGAAHAGGLHHGH--AA 60

Query: 61 GHHAAGHFGGGGHDCGGAGGGGGGGGGVSAC 90
           HHA GHFGGGGHD GG GGGGGGGGG   C
Sbjct: 61 LHHAGGHFGGGGHDHGGGGGGGGGGGGGGGC 88

BLAST of Bhi03G001606 vs. NCBI nr
Match: KAA0045150.1 (ctenidin-1-like [Cucumis melo var. makuwa] >TYK23587.1 ctenidin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 4.6e-07
Identity = 52/87 (59.77%), Postives = 60/87 (68.97%), Query Frame = 0

Query: 1  MVEPFIIIPVVFVSVCVVLTVLSLLCWTAGGSSSGGGRAYFSGAGHGGGFHHHHGDAGGH 60
          M    +II +VFV + V   +LS++CW +G SSSGGG A+F GA H GGFHHH G    H
Sbjct: 1  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAG-GHAH 60

Query: 61 HAA--GHFGGGGHDCGGAGGGGGGGGG 86
          H A   H GGGGHDCGGA GGGGGGGG
Sbjct: 61 HVAIVTHSGGGGHDCGGAAGGGGGGGG 86

BLAST of Bhi03G001606 vs. NCBI nr
Match: XP_008450046.1 (PREDICTED: ctenidin-1-like [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-05
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 0

Query: 1  MVEPFIIIPVVFVSVCVVLTVLSLLCWTAGGSSSGGGRAYFSGAGHGGGFHHHHGDAGGH 60
          M    +II +VFV + V   +LS++CW +G SSSGGG A+F GA H GGFHHH G    H
Sbjct: 1  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAG-GHAH 60

Query: 61 HAA--GHFGGGGHDCG 75
          H A   H GGGGHDCG
Sbjct: 61 HVAIVTHSGGGGHDCG 75

BLAST of Bhi03G001606 vs. ExPASy TrEMBL
Match: A0A0A0KXN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297480 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.9e-13
Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 0

Query: 1  MVEPFIIIPVVFVSVCVVLTVLSLLCWTAGGSSSGGGRAYFSGAGHGGGFHHHHGDAGGH 60
          M +PF+I+P+VFVSV V+ TVLS +CWT+G SSSGGG A+F GA H GGFHHH G    H
Sbjct: 1  MADPFVIVPLVFVSVVVLFTVLSFICWTSGASSSGGGHAHFGGAAHAGGFHHHAGGHAHH 60

Query: 61 HAAGHFGGGGHDCGGAGGGGGGGGGVSAC 90
           A  H GGGGH CG  GG GGGGG  SAC
Sbjct: 61 VAVAHSGGGGHGCG--GGAGGGGGSSSAC 87

BLAST of Bhi03G001606 vs. ExPASy TrEMBL
Match: A0A5D3DIY3 (Ctenidin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00980 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07
Identity = 52/87 (59.77%), Postives = 60/87 (68.97%), Query Frame = 0

Query: 1  MVEPFIIIPVVFVSVCVVLTVLSLLCWTAGGSSSGGGRAYFSGAGHGGGFHHHHGDAGGH 60
          M    +II +VFV + V   +LS++CW +G SSSGGG A+F GA H GGFHHH G    H
Sbjct: 1  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAG-GHAH 60

Query: 61 HAA--GHFGGGGHDCGGAGGGGGGGGG 86
          H A   H GGGGHDCGGA GGGGGGGG
Sbjct: 61 HVAIVTHSGGGGHDCGGAAGGGGGGGG 86

BLAST of Bhi03G001606 vs. ExPASy TrEMBL
Match: A0A1S3BPC8 (ctenidin-1-like OS=Cucumis melo OX=3656 GN=LOC103491755 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-05
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 0

Query: 1  MVEPFIIIPVVFVSVCVVLTVLSLLCWTAGGSSSGGGRAYFSGAGHGGGFHHHHGDAGGH 60
          M    +II +VFV + V   +LS++CW +G SSSGGG A+F GA H GGFHHH G    H
Sbjct: 1  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAG-GHAH 60

Query: 61 HAA--GHFGGGGHDCG 75
          H A   H GGGGHDCG
Sbjct: 61 HVAIVTHSGGGGHDCG 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN54298.11.6e-1264.04hypothetical protein Csa_017993 [Cucumis sativus][more]
XP_011654372.12.1e-1264.63glycine-rich protein DOT1 [Cucumis sativus][more]
KAG6581831.12.8e-1271.43hypothetical protein SDJN03_21833, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0045150.14.6e-0759.77ctenidin-1-like [Cucumis melo var. makuwa] >TYK23587.1 ctenidin-1-like [Cucumis ... [more]
XP_008450046.13.3e-0555.26PREDICTED: ctenidin-1-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A0A0KXN67.9e-1364.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297480 PE=4 SV=1[more]
A0A5D3DIY32.2e-0759.77Ctenidin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G0098... [more]
A0A1S3BPC81.6e-0555.26ctenidin-1-like OS=Cucumis melo OX=3656 GN=LOC103491755 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001606Bhi03M001606mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane