Bhi03G001434 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G001434
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Protein Ycf2-like
Location	chr3: 38942705 .. 38943222 (-)
RNA-Seq Expression	Bhi03G001434
Synteny	Bhi03G001434

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGATGGAAATCAACAAAAACACCCGATTGGAACTACCTCCAGGAGCACATCTTCAAATCAAGTGATGTAAGTATATTTGCTATAGATTACCATTTGATATATGTTTGTCAACTATAGATTAACATCTGATTATATATTGTACTCATTTTGTATAGTTTACTATTGTCTCTTTAAATCCATATTATTCTGAATTACATTCAAATTACTACCAATATTTTAAGAATGAACAATTGGATGTGATTGAAGAAAGATGCGCATGTAAAAGGACAATAAAATTGGATGATGATGAAGAAGACTTGTATGAACAATCAAGGGAGAGTTCAAGGAAGGAAGCATTTTTAAGAGTCGAAATGAGGCAAGTAAAAGAGGATTTGGCCTTTTTAAAAGAGAAAGCTACTAGATTGACAAAAGCTACAAATGAAGCGTTGGGATTGCTAAACTCCATCATAGAAATTATCAATGAAAGATTACCTCCAAGAAAGACAGTCTCAAGATTCAATCTATCCATATAA

mRNA sequence

ATGTTGAGATGGAAATCAACAAAAACACCCGATTGGAACTACCTCCAGGAGCACATCTTCAAATCAAGTGATTTTACTATTGTCTCTTTAAATCCATATTATTCTGAATTACATTCAAATTACTACCAATATTTTAAGAATGAACAATTGGATGTGATTGAAGAAAGATGCGCATGTAAAAGGACAATAAAATTGGATGATGATGAAGAAGACTTGTATGAACAATCAAGGGAGAGTTCAAGGAAGGAAGCATTTTTAAGAGTCGAAATGAGGCAAGTAAAAGAGGATTTGGCCTTTTTAAAAGAGAAAGCTACTAGATTGACAAAAGCTACAAATGAAGCGTTGGGATTGCTAAACTCCATCATAGAAATTATCAATGAAAGATTACCTCCAAGAAAGACAGTCTCAAGATTCAATCTATCCATATAA

Coding sequence (CDS)

ATGTTGAGATGGAAATCAACAAAAACACCCGATTGGAACTACCTCCAGGAGCACATCTTCAAATCAAGTGATTTTACTATTGTCTCTTTAAATCCATATTATTCTGAATTACATTCAAATTACTACCAATATTTTAAGAATGAACAATTGGATGTGATTGAAGAAAGATGCGCATGTAAAAGGACAATAAAATTGGATGATGATGAAGAAGACTTGTATGAACAATCAAGGGAGAGTTCAAGGAAGGAAGCATTTTTAAGAGTCGAAATGAGGCAAGTAAAAGAGGATTTGGCCTTTTTAAAAGAGAAAGCTACTAGATTGACAAAAGCTACAAATGAAGCGTTGGGATTGCTAAACTCCATCATAGAAATTATCAATGAAAGATTACCTCCAAGAAAGACAGTCTCAAGATTCAATCTATCCATATAA

Protein sequence

MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACKRTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNSIIEIINERLPPRKTVSRFNLSI

Homology

[Close]

BLAST of Bhi03G001434 vs. NCBI nr
Match: XP_038896481.1 (uncharacterized protein LOC120084732 [Benincasa hispida])

HSP 1 Score: 104.8 bits (260), Expect = 6.4e-19
Identity = 61/123 (49.59%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           MLRW+ TK  DWNYLQE IFK++DF +V LNP+  ELHSNY+QYF NE L+VIEER   K
Sbjct: 75  MLRWRLTKKLDWNYLQECIFKANDFKVVPLNPFEDELHSNYFQYFANEPLEVIEERWKYK 134

Query: 61  RTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNS 120
           R+I L DDEE   EQ  +S   +     ++ ++ EDL  LKE+  +++K       L NS
Sbjct: 135 RSICL-DDEEFWNEQEVQSLGVDGSNGGDIGKINEDLESLKEETVKISKNIVMLFELFNS 194

Query: 121 IIE 124
           + E
Sbjct: 195 MNE 196

[Close]

BLAST of Bhi03G001434 vs. NCBI nr
Match: KAA0036929.1 (hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-12
Identity = 49/133 (36.84%), Postives = 78/133 (58.65%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           ++ WK  + P W YLQ + FKSSDFT++   P   EL S  +Q+F N+  + +E+    +
Sbjct: 74  IINWKLEQQPVWTYLQRNYFKSSDFTVIPFTPTSDELTSPNFQFFLNDAPNEVEK----E 133

Query: 61  RTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNS 120
           R+ +++D+ +   E+   +   +  LR E+++VK+DL  LK     +    NE L LLN+
Sbjct: 134 RSEEIEDENDKGDEEETVNDETKKSLRKEIQEVKKDLESLK---NTVENGQNEVLELLNN 193

Query: 121 IIEIINERLPPRK 134
           II IINER+P  K
Sbjct: 194 IITIINERMPTEK 199

[Close]

BLAST of Bhi03G001434 vs. NCBI nr
Match: TYJ96590.1 (hypothetical protein E5676_scaffold1278G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 7.6e-12
Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           ++ WK  + P W YLQ + FKSSDFT++   P   EL S  +Q+F N+  + +E+    +
Sbjct: 74  IINWKLEQQPVWTYLQRNYFKSSDFTVIPFTPTSDELTSPNFQFFLNDAPNEVEK----E 133

Query: 61  RTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNS 120
           R+ + +D+ +   E+   +   +  LR E+++VK+DL  LK     +    NE L LLN+
Sbjct: 134 RSEETEDENDKGDEEETVNDETKKSLRKEIQEVKKDLESLK---NTVENGQNEVLELLNN 193

Query: 121 IIEIINERLPPRK 134
           II IINER+P  K
Sbjct: 194 IITIINERMPTEK 199

[Close]

BLAST of Bhi03G001434 vs. NCBI nr
Match: TYK15460.1 (hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 7.6e-12
Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           ++ WK  + P W YLQ + FKSSDFT++   P   EL S  +Q+F N+  + +E+    +
Sbjct: 74  IINWKLEQQPVWTYLQRNYFKSSDFTVIPFTPTSDELTSPNFQFFLNDAPNEVEK----E 133

Query: 61  RTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNS 120
           R+ + +D+ +   E+   +   +  LR E+++VK+DL  LK     +    NE L LLN+
Sbjct: 134 RSEETEDENDKGDEEETVNDETKKSLRKEIQEVKKDLESLK---NTVENGQNEVLELLNN 193

Query: 121 IIEIINERLPPRK 134
           II IINER+P  K
Sbjct: 194 IITIINERMPTEK 199

[Close]

BLAST of Bhi03G001434 vs. NCBI nr
Match: KAA0032264.1 (hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 9.9e-12
Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           ++ WK  + P W YLQ + FKSSDFT++   P   EL S  +Q+F N+  + +E+    +
Sbjct: 93  IINWKLEQQPVWTYLQRNYFKSSDFTVIPFTPTSDELTSPNFQFFLNDAPNEVEK----E 152

Query: 61  RTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNS 120
           R+ + +D+ +   E+   +   +  LR E+++VK DL  LK     +    NE L LLN+
Sbjct: 153 RSEETEDENDKGDEEETVNDETKKSLRKEIQEVKNDLESLK---NTVENGQNEVLELLNN 212

Query: 121 IIEIINERLPPRK 134
           II IINER+P  K
Sbjct: 213 IITIINERMPTEK 218

[Close]

BLAST of Bhi03G001434 vs. ExPASy TrEMBL
Match: A0A5A7T6C2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00010 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 49/133 (36.84%), Postives = 78/133 (58.65%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           ++ WK  + P W YLQ + FKSSDFT++   P   EL S  +Q+F N+  + +E+    +
Sbjct: 74  IINWKLEQQPVWTYLQRNYFKSSDFTVIPFTPTSDELTSPNFQFFLNDAPNEVEK----E 133

Query: 61  RTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNS 120
           R+ +++D+ +   E+   +   +  LR E+++VK+DL  LK     +    NE L LLN+
Sbjct: 134 RSEEIEDENDKGDEEETVNDETKKSLRKEIQEVKKDLESLK---NTVENGQNEVLELLNN 193

Query: 121 IIEIINERLPPRK 134
           II IINER+P  K
Sbjct: 194 IITIINERMPTEK 199

[Close]

BLAST of Bhi03G001434 vs. ExPASy TrEMBL
Match: A0A5D3CVR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00300 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.7e-12
Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           ++ WK  + P W YLQ + FKSSDFT++   P   EL S  +Q+F N+  + +E+    +
Sbjct: 74  IINWKLEQQPVWTYLQRNYFKSSDFTVIPFTPTSDELTSPNFQFFLNDAPNEVEK----E 133

Query: 61  RTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNS 120
           R+ + +D+ +   E+   +   +  LR E+++VK+DL  LK     +    NE L LLN+
Sbjct: 134 RSEETEDENDKGDEEETVNDETKKSLRKEIQEVKKDLESLK---NTVENGQNEVLELLNN 193

Query: 121 IIEIINERLPPRK 134
           II IINER+P  K
Sbjct: 194 IITIINERMPTEK 199

[Close]

BLAST of Bhi03G001434 vs. ExPASy TrEMBL
Match: A0A5D3B9P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00080 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.7e-12
Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           ++ WK  + P W YLQ + FKSSDFT++   P   EL S  +Q+F N+  + +E+    +
Sbjct: 74  IINWKLEQQPVWTYLQRNYFKSSDFTVIPFTPTSDELTSPNFQFFLNDAPNEVEK----E 133

Query: 61  RTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNS 120
           R+ + +D+ +   E+   +   +  LR E+++VK+DL  LK     +    NE L LLN+
Sbjct: 134 RSEETEDENDKGDEEETVNDETKKSLRKEIQEVKKDLESLK---NTVENGQNEVLELLNN 193

Query: 121 IIEIINERLPPRK 134
           II IINER+P  K
Sbjct: 194 IITIINERMPTEK 199

[Close]

BLAST of Bhi03G001434 vs. ExPASy TrEMBL
Match: A0A5A7SM53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00980 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.8e-12
Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           ++ WK  + P W YLQ + FKSSDFT++   P   EL S  +Q+F N+  + +E+    +
Sbjct: 93  IINWKLEQQPVWTYLQRNYFKSSDFTVIPFTPTSDELTSPNFQFFLNDAPNEVEK----E 152

Query: 61  RTIKLDDDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLLNS 120
           R+ + +D+ +   E+   +   +  LR E+++VK DL  LK     +    NE L LLN+
Sbjct: 153 RSEETEDENDKGDEEETVNDETKKSLRKEIQEVKNDLESLK---NTVENGQNEVLELLNN 212

Query: 121 IIEIINERLPPRK 134
           II IINER+P  K
Sbjct: 213 IITIINERMPTEK 218

[Close]

BLAST of Bhi03G001434 vs. ExPASy TrEMBL
Match: A0A5D3E033 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00120 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 6.3e-12
Identity = 51/135 (37.78%), Postives = 80/135 (59.26%), Query Frame = 0


Query: 1   MLRWKSTKTPDWNYLQEHIFKSSDFTIVSLNPYYSELHSNYYQYFKNEQLDVIEERCACK 60
           ++ WK  + P W YLQ + FKSSDFT++   P   EL S  +Q+F N+  + +E+  + +
Sbjct: 50  IINWKLEQQPVWTYLQRNYFKSSDFTVIPFTPTSDELISPNFQFFLNDAPNEVEKERSEE 109

Query: 61  RTIKLD--DDEEDLYEQSRESSRKEAFLRVEMRQVKEDLAFLKEKATRLTKATNEALGLL 120
              + D  D+EE + +++++S RK      E+++VK+DL  LK     +    NE L LL
Sbjct: 110 TEEENDKGDEEETVNDETKKSLRK------EIQEVKKDLESLK---NTVENGKNEVLELL 169

Query: 121 NSIIEIINERLPPRK 134
           N+II IINER+P  K
Sbjct: 170 NNIITIINERMPTEK 175

The following BLAST results are available for this feature:

BLAST of Bhi03G001434 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G001434 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G001434 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896481.1	6.4e-19	49.59	uncharacterized protein LOC120084732 [Benincasa hispida]	[more]
KAA0036929.1	3.4e-12	36.84	hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa]	[more]
TYJ96590.1	7.6e-12	36.84	hypothetical protein E5676_scaffold1278G00080 [Cucumis melo var. makuwa]	[more]
TYK15460.1	7.6e-12	36.84	hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa]	[more]
KAA0032264.1	9.9e-12	36.84	hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa]	[more]

BLAST of Bhi03G001434 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6C2	1.7e-12	36.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CVR6	3.7e-12	36.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3B9P7	3.7e-12	36.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SM53	4.8e-12	36.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E033	6.3e-12	37.78	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 83..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001434	Bhi03M001434	mRNA