Bhi03G000999 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000999
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Late embryogenesis abundant protein
Location	chr3: 26714681 .. 26715761 (+)
RNA-Seq Expression	Bhi03G000999
Synteny	Bhi03G000999

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAACTTAATTTCCCGAAGTAAAATGATAAACGCCATTAGGTTCGGGCGTACTCCACCGCCAATCGTGCTCACGTCACCTCTTCCGCCGCAGCTCCGCCGTATATGCTCGCCTGAGCTCCGATCCCGTCAAGCGATTGGTTTAGCCACCGCACCTGATCAGAACTCAAACGATATGGATGACTCTCAGAACAAAGCCAAGGAGACTGGGTTAGTAGGCTTCATTATTATTTTATTTGGATTGTTTTTAGTTTTCTGTCTTTTTTTAAAAAAAAAATTATTCTAGTTTTTACCAAAATTTAATAAATTCTAGAATTATTAATCAAATTTTAGAAGCAAAATAAGTTTCTGGATCCTACTCTTTTTTAGTTTTTTAAACTTAAAAAAAAAGGTTTGGTTAAAAAAAAAAAAAAAAAAAAGAAGAGTGATCAGATGGGATTTTCGTTTTTTTTTTTAATTGTAGGTAAACATATTCAAAAATAAAAATTTTCTTTAAATAGATGGTTCTTAGTTTTTCAAATTGAAATTGGTTAATAAGTGAAATGTGTGAAAACAGAGATATAATGTGTGATTCCTTCGGGGAAGCGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAAGGAATCAGCCGAGTGACGACGAAACCGATAATAAAAAATGGCCCTCCCACGGGAATCAACATGGTAATTAAACACATTCTGTCTTTAGAATGTGTGATTTATTAGTTAAATGATCTTAATTGGTATATTGTTTTTGATATGTTTTGAAGAATATGATAAAAGCCAAGGGTGCGAAGTGAAGGAGAAGGAGAAGTCACGCCATCAGGCTCATGCAAATTAATTATTCTCCCTTTGTCTAATATTTGTTTTTTCCCCATCGACAATTATGAGGAGGAAATGTTTGTAGGGTTTGTAATTATCTCTATGCCCAATGTGTTTTGGTTTCTCATGGTTCTTTTATGAGAATTTAGGGTTGCGATTGTCGATTTTCTTCACATTGTAAATTAATGATGGTTTCACCTATGTGCATATTTGGGTATTTTTAATTAGAAAATGACTGAAAGTATCA

mRNA sequence

CTTAAACTTAATTTCCCGAAGTAAAATGATAAACGCCATTAGGTTCGGGCGTACTCCACCGCCAATCGTGCTCACGTCACCTCTTCCGCCGCAGCTCCGCCGTATATGCTCGCCTGAGCTCCGATCCCGTCAAGCGATTGGTTTAGCCACCGCACCTGATCAGAACTCAAACGATATGGATGACTCTCAGAACAAAGCCAAGGAGACTGGAGATATAATGTGTGATTCCTTCGGGGAAGCGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAAGGAATCAGCCGAGTGACGACGAAACCGATAATAAAAAATGGCCCTCCCACGGGAATCAACATGAATATGATAAAAGCCAAGGGTGCGAAGTGAAGGAGAAGGAGAAGTCACGCCATCAGGCTCATGCAAATTAATTATTCTCCCTTTGTCTAATATTTGTTTTTTCCCCATCGACAATTATGAGGAGGAAATGTTTGTAGGGTTTGTAATTATCTCTATGCCCAATGTGTTTTGGTTTCTCATGGTTCTTTTATGAGAATTTAGGGTTGCGATTGTCGATTTTCTTCACATTGTAAATTAATGATGGTTTCACCTATGTGCATATTTGGGTATTTTTAATTAGAAAATGACTGAAAGTATCA

Coding sequence (CDS)

ATGATAAACGCCATTAGGTTCGGGCGTACTCCACCGCCAATCGTGCTCACGTCACCTCTTCCGCCGCAGCTCCGCCGTATATGCTCGCCTGAGCTCCGATCCCGTCAAGCGATTGGTTTAGCCACCGCACCTGATCAGAACTCAAACGATATGGATGACTCTCAGAACAAAGCCAAGGAGACTGGAGATATAATGTGTGATTCCTTCGGGGAAGCGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAAGGAATCAGCCGAGTGACGACGAAACCGATAATAAAAAATGGCCCTCCCACGGGAATCAACATGAATATGATAAAAGCCAAGGGTGCGAAGTGAAGGAGAAGGAGAAGTCACGCCATCAGGCTCATGCAAATTAA

Protein sequence

MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAPDQNSNDMDDSQNKAKETGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCEVKEKEKSRHQAHAN

Homology

[Close]

BLAST of Bhi03G000999 vs. TAIR 10
Match: AT5G66780.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-14
Identity = 54/133 (40.60%), Postives = 73/133 (54.89%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRRICS-PELRSRQAIGLATAPDQNSNDMDDS-QNKA 60
           MINA +  R+ P     S         CS P    R+  G++ A   +   MD   +N  
Sbjct: 1   MINAFKTIRSLPSNTTVS--------FCSTPSRLGRKVTGVSFATTSDQQKMDKKPENPN 60

Query: 61  KETGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCEV 120
           ++TGD+M  S+GE YATRS+EEGFGG YG NQ    E +      H N  +YDK+QG E 
Sbjct: 61  EKTGDVMSHSYGEGYATRSDEEGFGGIYGGNQTLQKENE-----IHENHPDYDKTQGSES 120

Query: 121 KEKEKSRHQAHAN 132
           KEKEK+R+Q  ++
Sbjct: 121 KEKEKARNQTQSH 120

[Close]

BLAST of Bhi03G000999 vs. NCBI nr
Match: XP_038883658.1 (uncharacterized protein LOC120074572 [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 7.6e-67
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAPDQNSNDMDDSQNKAKE 60
           MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAPDQNSNDMDDSQNKAKE
Sbjct: 1   MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAPDQNSNDMDDSQNKAKE 60

Query: 61  TGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCEVKE 120
           TGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCEVKE
Sbjct: 61  TGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCEVKE 120

Query: 121 KEKSRHQAHAN 132
           KEKSRHQAHAN
Sbjct: 121 KEKSRHQAHAN 131

[Close]

BLAST of Bhi03G000999 vs. NCBI nr
Match: XP_008441122.1 (PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo] >KAA0036233.1 late embryogenesis abundant protein [Cucumis melo var. makuwa] >TYK12628.1 late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 191.8 bits (486), Expect = 3.7e-45
Identity = 106/134 (79.10%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRR-ICSPELRSRQAIGLATAPDQNSND--MDDSQNK 60
           MINAIRFGRTPPPIVLTSPLPPQLRR ICS ELRSRQA G ATAPDQN  D  MD+SQNK
Sbjct: 1   MINAIRFGRTPPPIVLTSPLPPQLRRSICSLELRSRQATGFATAPDQNPKDEEMDESQNK 60

Query: 61  AKETGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCE 120
            KETGDIMCDSFGE YATRSEEEGFGGTYG N   DD+ +++   S  N+HEYD+SQG E
Sbjct: 61  TKETGDIMCDSFGEGYATRSEEEGFGGTYGGNVLDDDDEEHRNKKS-VNEHEYDRSQGSE 120

Query: 121 VKEKEKSRHQAHAN 132
           VKEKEKSRHQAHAN
Sbjct: 121 VKEKEKSRHQAHAN 133

[Close]

BLAST of Bhi03G000999 vs. NCBI nr
Match: XP_011658492.1 (uncharacterized protein LOC101219972 [Cucumis sativus] >KGN48825.1 hypothetical protein Csa_003589 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 108/135 (80.00%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAPDQN--SNDMDDSQNKA 60
           MINAIRFGRTPPPIVLTSPLPP+LRRI SPEL SRQAI  ATAPD+N    +MDDSQNK 
Sbjct: 1   MINAIRFGRTPPPIVLTSPLPPKLRRISSPELPSRQAISFATAPDRNPKCEEMDDSQNKT 60

Query: 61  KETGDIMCDSFGEAYATRSEEEGFGGTYGRNQPS--DDETDNKKWPSHGNQHEYDKSQGC 120
           KETGDIMCDSFGE YATRSEEEGFGGTYG    S  DDE  NKK     NQHEYDKSQG 
Sbjct: 61  KETGDIMCDSFGEGYATRSEEEGFGGTYGGKYQSIDDDEHMNKK---PVNQHEYDKSQGS 120

Query: 121 EVKEKEKSRHQAHAN 132
           EVKEKEKSRHQAHAN
Sbjct: 121 EVKEKEKSRHQAHAN 132

[Close]

BLAST of Bhi03G000999 vs. NCBI nr
Match: XP_022133090.1 (uncharacterized protein LOC111005770 [Momordica charantia])

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-39
Identity = 93/132 (70.45%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAP-DQNSNDMDDSQNKAK 60
           M +AIR GR+PPP VLT+PLPPQLRR  SPELRSRQ IGLATAP DQ+S++MDDS+N  K
Sbjct: 1   MFHAIRLGRSPPPSVLTTPLPPQLRRRSSPELRSRQVIGLATAPADQSSDNMDDSKNTVK 60

Query: 61  ETGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCEVK 120
           +TGDIM  SFGE YATRS+EEGFGG YG N+  DD+T+ K    H N  EYDKSQG EVK
Sbjct: 61  KTGDIMSHSFGEGYATRSDEEGFGGIYGGNRSDDDDTEGKNGVIHENHPEYDKSQGSEVK 120

Query: 121 EKEKSRHQAHAN 132
           EKE SRHQ HAN
Sbjct: 121 EKENSRHQTHAN 132

[Close]

BLAST of Bhi03G000999 vs. NCBI nr
Match: XP_023543425.1 (uncharacterized protein LOC111803315 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36
Identity = 88/131 (67.18%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAPDQNSNDMDDSQNKAKE 60
           M+NAIRF R+PPPIVLT PLPPQLRRI  PELRSRQ I  +TAPDQN  +MDDS+N AK+
Sbjct: 1   MMNAIRFARSPPPIVLTLPLPPQLRRIDLPELRSRQLISFSTAPDQNPQNMDDSKNTAKQ 60

Query: 61  TGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCEVKE 120
           T D+M DSFG AYA+RSEEEGFGG Y   + +D+  +N+K P      EYDKSQG EVKE
Sbjct: 61  TEDLMTDSFGHAYASRSEEEGFGGIYRSVESTDEGAENEKKP------EYDKSQGSEVKE 120

Query: 121 KEKSRHQAHAN 132
           KEK+RHQAH+N
Sbjct: 121 KEKARHQAHSN 125

[Close]

BLAST of Bhi03G000999 vs. ExPASy TrEMBL
Match: A0A5D3CN97 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002150 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.8e-45
Identity = 106/134 (79.10%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRR-ICSPELRSRQAIGLATAPDQNSND--MDDSQNK 60
           MINAIRFGRTPPPIVLTSPLPPQLRR ICS ELRSRQA G ATAPDQN  D  MD+SQNK
Sbjct: 1   MINAIRFGRTPPPIVLTSPLPPQLRRSICSLELRSRQATGFATAPDQNPKDEEMDESQNK 60

Query: 61  AKETGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCE 120
            KETGDIMCDSFGE YATRSEEEGFGGTYG N   DD+ +++   S  N+HEYD+SQG E
Sbjct: 61  TKETGDIMCDSFGEGYATRSEEEGFGGTYGGNVLDDDDEEHRNKKS-VNEHEYDRSQGSE 120

Query: 121 VKEKEKSRHQAHAN 132
           VKEKEKSRHQAHAN
Sbjct: 121 VKEKEKSRHQAHAN 133

[Close]

BLAST of Bhi03G000999 vs. ExPASy TrEMBL
Match: A0A1S3B3C5 (uncharacterized protein LOC103485350 OS=Cucumis melo OX=3656 GN=LOC103485350 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.8e-45
Identity = 106/134 (79.10%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRR-ICSPELRSRQAIGLATAPDQNSND--MDDSQNK 60
           MINAIRFGRTPPPIVLTSPLPPQLRR ICS ELRSRQA G ATAPDQN  D  MD+SQNK
Sbjct: 1   MINAIRFGRTPPPIVLTSPLPPQLRRSICSLELRSRQATGFATAPDQNPKDEEMDESQNK 60

Query: 61  AKETGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCE 120
            KETGDIMCDSFGE YATRSEEEGFGGTYG N   DD+ +++   S  N+HEYD+SQG E
Sbjct: 61  TKETGDIMCDSFGEGYATRSEEEGFGGTYGGNVLDDDDEEHRNKKS-VNEHEYDRSQGSE 120

Query: 121 VKEKEKSRHQAHAN 132
           VKEKEKSRHQAHAN
Sbjct: 121 VKEKEKSRHQAHAN 133

[Close]

BLAST of Bhi03G000999 vs. ExPASy TrEMBL
Match: A0A0A0KGG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502630 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.8e-45
Identity = 108/135 (80.00%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAPDQN--SNDMDDSQNKA 60
           MINAIRFGRTPPPIVLTSPLPP+LRRI SPEL SRQAI  ATAPD+N    +MDDSQNK 
Sbjct: 1   MINAIRFGRTPPPIVLTSPLPPKLRRISSPELPSRQAISFATAPDRNPKCEEMDDSQNKT 60

Query: 61  KETGDIMCDSFGEAYATRSEEEGFGGTYGRNQPS--DDETDNKKWPSHGNQHEYDKSQGC 120
           KETGDIMCDSFGE YATRSEEEGFGGTYG    S  DDE  NKK     NQHEYDKSQG 
Sbjct: 61  KETGDIMCDSFGEGYATRSEEEGFGGTYGGKYQSIDDDEHMNKK---PVNQHEYDKSQGS 120

Query: 121 EVKEKEKSRHQAHAN 132
           EVKEKEKSRHQAHAN
Sbjct: 121 EVKEKEKSRHQAHAN 132

[Close]

BLAST of Bhi03G000999 vs. ExPASy TrEMBL
Match: A0A6J1BUB9 (uncharacterized protein LOC111005770 OS=Momordica charantia OX=3673 GN=LOC111005770 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.6e-40
Identity = 93/132 (70.45%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAP-DQNSNDMDDSQNKAK 60
           M +AIR GR+PPP VLT+PLPPQLRR  SPELRSRQ IGLATAP DQ+S++MDDS+N  K
Sbjct: 1   MFHAIRLGRSPPPSVLTTPLPPQLRRRSSPELRSRQVIGLATAPADQSSDNMDDSKNTVK 60

Query: 61  ETGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCEVK 120
           +TGDIM  SFGE YATRS+EEGFGG YG N+  DD+T+ K    H N  EYDKSQG EVK
Sbjct: 61  KTGDIMSHSFGEGYATRSDEEGFGGIYGGNRSDDDDTEGKNGVIHENHPEYDKSQGSEVK 120

Query: 121 EKEKSRHQAHAN 132
           EKE SRHQ HAN
Sbjct: 121 EKENSRHQTHAN 132

[Close]

BLAST of Bhi03G000999 vs. ExPASy TrEMBL
Match: A0A6J1IUE6 (uncharacterized protein LOC111478513 OS=Cucurbita maxima OX=3661 GN=LOC111478513 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.7e-35
Identity = 89/137 (64.96%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAPDQNSNDMDDSQNKAKE 60
           MINAIRFGR+PPPIVLT PLPPQLRR+ SPELRSRQ IG +TAPDQN  +MDDS+N AK+
Sbjct: 1   MINAIRFGRSPPPIVLTLPLPPQLRRVDSPELRSRQLIGFSTAPDQNPRNMDDSKNTAKQ 60

Query: 61  TGDIMCDSFGEAYATRSEEEGFGGTYGRNQPSDDETDNKKWPSHGNQHEYDKSQGCEVKE 120
           TGDIM DSFG+AYA RSE EGFGG Y   + ++   +N+K P      EYDKSQG EVKE
Sbjct: 61  TGDIMTDSFGQAYACRSEYEGFGGIYRWIESTEVGAENEKKP------EYDKSQGSEVKE 120

Query: 121 K------EKSRHQAHAN 132
           +      EK+RHQ H+N
Sbjct: 121 EEKEKENEKARHQTHSN 131

The following BLAST results are available for this feature:

BLAST of Bhi03G000999 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66780.1	2.1e-14	40.60	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

BLAST of Bhi03G000999 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi03G000999 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883658.1	7.6e-67	100.00	uncharacterized protein LOC120074572 [Benincasa hispida]	[more]
XP_008441122.1	3.7e-45	79.10	PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo] >KAA0036233.1 lat...	[more]
XP_011658492.1	1.4e-44	80.00	uncharacterized protein LOC101219972 [Cucumis sativus] >KGN48825.1 hypothetical ...	[more]
XP_022133090.1	1.4e-39	70.45	uncharacterized protein LOC111005770 [Momordica charantia]	[more]
XP_023543425.1	1.1e-36	67.18	uncharacterized protein LOC111803315 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Bhi03G000999 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CN97	1.8e-45	79.10	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B3C5	1.8e-45	79.10	uncharacterized protein LOC103485350 OS=Cucumis melo OX=3656 GN=LOC103485350 PE=...	[more]
A0A0A0KGG3	6.8e-45	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502630 PE=4 SV=1	[more]
A0A6J1BUB9	6.6e-40	70.45	uncharacterized protein LOC111005770 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1IUE6	1.7e-35	64.96	uncharacterized protein LOC111478513 OS=Cucurbita maxima OX=3661 GN=LOC111478513...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..131
None	No IPR available	PANTHER	PTHR36410	EXPRESSED PROTEIN	coord: 1..130
None	No IPR available	PANTHER	PTHR36410:SF1	EXPRESSED PROTEIN	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000999	Bhi03M000999	mRNA