Bhi03G000945 (gene) Wax gourd (B227) v1

Overview
NameBhi03G000945
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr3: 25227212 .. 25227418 (-)
RNA-Seq ExpressionBhi03G000945
SyntenyBhi03G000945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTTCAGAGGATGGAGCAGGAGAGATCTGGCAGGAGAGATGACTCCGTCAAACCTCCCCATCACGGCGCCGCCGTCGCCGGCAAATCCAGTAAAAAAGTCCATCCCGGTACCGTATTTGGCGTTCTGGCGACCTCTAATTCCTGA

mRNA sequence

ATGTCGTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTTCAGAGGATGGAGCAGGAGAGATCTGGCAGGAGAGATGACTCCGTCAAACCTCCCCATCACGGCGCCGCCGTCGCCGGCAAATCCAGTAAAAAAGTCCATCCCGGTACCGTATTTGGCGTTCTGGCGACCTCTAATTCCTGA

Coding sequence (CDS)

ATGTCGTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTTCAGAGGATGGAGCAGGAGAGATCTGGCAGGAGAGATGACTCCGTCAAACCTCCCCATCACGGCGCCGCCGTCGCCGGCAAATCCAGTAAAAAAGTCCATCCCGGTACCGTATTTGGCGTTCTGGCGACCTCTAATTCCTGA

Protein sequence

MSSMGASCARVYVMKKKAEEKLQRMEQERSGRRDDSVKPPHHGAAVAGKSSKKVHPGTVFGVLATSNS
Homology
BLAST of Bhi03G000945 vs. TAIR 10
Match: AT4G39675.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 1.3e-04
Identity = 22/56 (39.29%), Postives = 40/56 (71.43%), Query Frame = 0

Query: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRRDDSVKPPHHGAAVAGKSSKKVHP 57
          MSS+GAS A + VM+KK +EK++++E+ER+   D++ + P   +  +G+ S K++P
Sbjct: 1  MSSIGASYAHLQVMQKKQKEKMKKLEKERNFDHDEAHRLPVETSFASGRISNKIYP 56

BLAST of Bhi03G000945 vs. NCBI nr
Match: KGN48780.1 (hypothetical protein Csa_002943 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 3.3e-21
Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0

Query: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRRDDSVKPP---HHGA-AVAGKSSKKVHP 60
          MSSMGASCARVYVMKKKAEEKLQRMEQERSGRR+DSVKPP   HH A  +AGKSSKKVHP
Sbjct: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTSHHAAGGIAGKSSKKVHP 60

Query: 61 GTVFGVLATSNS 69
          GT+FG+ ATSNS
Sbjct: 61 GTLFGLQATSNS 72

BLAST of Bhi03G000945 vs. NCBI nr
Match: KAA0036273.1 (hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa] >TYK12667.1 hypothetical protein E5676_scaffold255G002550 [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 4.7e-20
Identity = 61/74 (82.43%), Postives = 63/74 (85.14%), Query Frame = 0

Query: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRRDD--SVKPP----HHGAAVAGKSSKKV 60
          MSSMGASCARVYVMKKKAEEKLQRMEQERSGRR+D  SVKPP    H G  +AGKSSKKV
Sbjct: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRREDNNSVKPPKTAHHGGGGIAGKSSKKV 60

Query: 61 HPGTVFGVLATSNS 69
          HPGTVFGV  TSNS
Sbjct: 61 HPGTVFGVPPTSNS 74

BLAST of Bhi03G000945 vs. NCBI nr
Match: KAG6604014.1 (hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.7 bits (234), Expect = 3.2e-16
Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = 0

Query: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRRDDSVKPP-----HHGAAVAGKSSKKVH 60
          MSSMGA+CARVYVM+KK EEKL+RMEQER+GR +D+VKPP     H G  +AGK+ KKVH
Sbjct: 1  MSSMGAACARVYVMRKKTEEKLKRMEQERAGRLEDTVKPPKSAHHHAGGGIAGKACKKVH 60

Query: 61 PGTVFGVLATSNS 69
          PG VF V A SNS
Sbjct: 61 PGNVFAVSANSNS 73

BLAST of Bhi03G000945 vs. NCBI nr
Match: KAG6594855.1 (hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.9 bits (224), Expect = 4.6e-15
Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 0

Query: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRRDDSVKP---PHHGAAVAGKSSKKVHPG 60
          MSS+GASCARVYVMKKK EEKLQRMEQE++GRR+D VKP    HHG A AG + KKVHPG
Sbjct: 1  MSSIGASCARVYVMKKKVEEKLQRMEQEKAGRREDLVKPSKTAHHGGAFAGITCKKVHPG 60

Query: 61 TVFGVLATSNS 69
          TV  V A++ S
Sbjct: 61 TVISVPASNIS 71

BLAST of Bhi03G000945 vs. ExPASy TrEMBL
Match: A0A0A0KGB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500720 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21
Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0

Query: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRRDDSVKPP---HHGA-AVAGKSSKKVHP 60
          MSSMGASCARVYVMKKKAEEKLQRMEQERSGRR+DSVKPP   HH A  +AGKSSKKVHP
Sbjct: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTSHHAAGGIAGKSSKKVHP 60

Query: 61 GTVFGVLATSNS 69
          GT+FG+ ATSNS
Sbjct: 61 GTLFGLQATSNS 72

BLAST of Bhi03G000945 vs. ExPASy TrEMBL
Match: A0A5A7T065 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002550 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-20
Identity = 61/74 (82.43%), Postives = 63/74 (85.14%), Query Frame = 0

Query: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRRDD--SVKPP----HHGAAVAGKSSKKV 60
          MSSMGASCARVYVMKKKAEEKLQRMEQERSGRR+D  SVKPP    H G  +AGKSSKKV
Sbjct: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRREDNNSVKPPKTAHHGGGGIAGKSSKKV 60

Query: 61 HPGTVFGVLATSNS 69
          HPGTVFGV  TSNS
Sbjct: 61 HPGTVFGVPPTSNS 74

BLAST of Bhi03G000945 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.9e-05
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 0

Query: 1  MSSMGASCARVYVMKKKAEEKLQRMEQERSGRRDDSVKPPHHGAAVAGKSSKKVHPG 58
          MSS+GASCA +YVM+K+ +EKL+RME+ER  + + SV+      +  G+ SKKVHPG
Sbjct: 1  MSSIGASCAEIYVMRKRQKEKLKRMEEERVRKGESSVEESKVSGSTIGR-SKKVHPG 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G39675.11.3e-0439.29unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN48780.13.3e-2184.72hypothetical protein Csa_002943 [Cucumis sativus][more]
KAA0036273.14.7e-2082.43hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa] >TYK12667... [more]
KAG6604014.13.2e-1668.49hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6594855.14.6e-1570.42hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A0A0KGB81.6e-2184.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500720 PE=4 SV=1[more]
A0A5A7T0652.3e-2082.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A2N9EUS97.9e-0552.63Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..55
NoneNo IPR availablePANTHERPTHR34950OS04G0457400 PROTEINcoord: 1..62
NoneNo IPR availablePANTHERPTHR34950:SF2BNAC01G00560D PROTEINcoord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M000945Bhi03M000945mRNA