Bhi03G000925 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000925
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr3: 24897272 .. 24897583 (-)
RNA-Seq Expression	Bhi03G000925
Synteny	Bhi03G000925

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAGAGGGGAAAATTTGAAACCCAATCTGAGAACTGTTAATGTACTTGTCAGAGCATGGTGTAAGAAGAAGAAAATAGCAGAGGCATGGAATGTGGTGCAAAATATGGTAGCCTTGGGAATCAAGCCAGATGCTGTTACTTACAACACCATAGCAACTGCTTGTGCTCAAAGTGGAGAAATAGATCGAGCTGAAGAGATTATTAAACTGATGCAAGATAACAATATTCAACCTAATCAGCGAACTTGCAACATTATGGCTTGTGGATATTGCAAGGAAGGTAGACTAAAGGAGGCCATGAATGGATAA

mRNA sequence

ATGTACAGAGGGGAAAATTTGAAACCCAATCTGAGAACTGTTAATGTACTTGTCAGAGCATGGTGTAAGAAGAAGAAAATAGCAGAGGCATGGAATGTGGTGCAAAATATGGTAGCCTTGGGAATCAAGCCAGATGCTGTTACTTACAACACCATAGCAACTGCTTGTGCTCAAAGTGGAGAAATAGATCGAGCTGAAGAGATTATTAAACTGATGCAAGATAACAATATTCAACCTAATCAGCGAACTTGCAACATTATGGCTTGTGGATATTGCAAGGAAGGTAGACTAAAGGAGGCCATGAATGGATAA

Coding sequence (CDS)

ATGTACAGAGGGGAAAATTTGAAACCCAATCTGAGAACTGTTAATGTACTTGTCAGAGCATGGTGTAAGAAGAAGAAAATAGCAGAGGCATGGAATGTGGTGCAAAATATGGTAGCCTTGGGAATCAAGCCAGATGCTGTTACTTACAACACCATAGCAACTGCTTGTGCTCAAAGTGGAGAAATAGATCGAGCTGAAGAGATTATTAAACTGATGCAAGATAACAATATTCAACCTAATCAGCGAACTTGCAACATTATGGCTTGTGGATATTGCAAGGAAGGTAGACTAAAGGAGGCCATGAATGGATAA

Protein sequence

MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSGEIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAMNG

Homology

[Close]

BLAST of Bhi03G000925 vs. TAIR 10
Match: AT5G25630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 9   PNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSGEIDRAEE- 68
           PN+RT NVLV+AWCKKKK+ EAW VV+ M   G++PD VTYNTIAT   Q GE  RAE  
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245

Query: 69  -IIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
            + K++     +PN RTC I+  GYC+EGR+++ +
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280

[Close]

BLAST of Bhi03G000925 vs. TAIR 10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 9   PNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSGEIDRAEE- 68
           PN+RT NVLV+AWCKKKK+ EAW VV+ M   G++PD VTYNTIAT   Q GE  RAE  
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245

Query: 69  -IIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
            + K++     +PN RTC I+  GYC+EGR+++ +
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280

[Close]

BLAST of Bhi03G000925 vs. TAIR 10
Match: AT5G21222.1 (protein kinase family protein )

HSP 1 Score: 110.9 bits (276), Expect = 6.1e-25
Identity = 52/102 (50.98%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           M R E L+PN RT N+LV+AWC ++KI EAWN+V  M + G+KPD VT+NT+A A A+ G
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509

Query: 61  EIDRAEE-IIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
               AE+ II  M  N ++PN RTC  +  GYC+EG+++EA+
Sbjct: 510 STCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEAL 551

[Close]

BLAST of Bhi03G000925 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 8.2e-14
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 7   LKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSGEIDRAE 66
           L+PN+ T N +V   CK   I EA  +V    A G+  D VTY T+  A  +SGE+D+A+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546

Query: 67  EIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKE 100
           EI+K M    +QP   T N++  G+C  G L++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579

[Close]

BLAST of Bhi03G000925 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 8.2e-14
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 7   LKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSGEIDRAE 66
           L+PN+ T N +V   CK   I EA  +V    A G+  D VTY T+  A  +SGE+D+A+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546

Query: 67  EIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKE 100
           EI+K M    +QP   T N++  G+C  G L++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579

[Close]

BLAST of Bhi03G000925 vs. ExPASy Swiss-Prot
Match: Q8GZ63 (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-24
Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 9   PNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSGEIDRAEE- 68
           PN+RT NVLV+AWCKKKK+ EAW VV+ M   G++PD VTYNTIAT   Q GE  RAE  
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245

Query: 69  -IIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
            + K++     +PN RTC I+  GYC+EGR+++ +
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280

[Close]

BLAST of Bhi03G000925 vs. ExPASy Swiss-Prot
Match: Q8S9D1 (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX=3702 GN=ATC401 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.5e-24
Identity = 52/102 (50.98%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           M R E L+PN RT N+LV+AWC ++KI EAWN+V  M + G+KPD VT+NT+A A A+ G
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509

Query: 61  EIDRAEE-IIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
               AE+ II  M  N ++PN RTC  +  GYC+EG+++EA+
Sbjct: 510 STCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEAL 551

[Close]

BLAST of Bhi03G000925 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-12
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 7   LKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSGEIDRAE 66
           L+PN+ T N +V   CK   I EA  +V    A G+  D VTY T+  A  +SGE+D+A+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546

Query: 67  EIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKE 100
           EI+K M    +QP   T N++  G+C  G L++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579

[Close]

BLAST of Bhi03G000925 vs. ExPASy Swiss-Prot
Match: Q9ZVX5 (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12
Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 10  NLRTVNVLVRAWCKKKKIAEAWNVVQNMVA-LGIKPDAVTYNTIATACAQSGEIDRAEEI 69
           N++T NVLV  +C + K+ +A  +++ MV+   + PD VTYNTI  A ++ G +   +E+
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262

Query: 70  IKLMQDNNIQPNQRTCNIMACGYCKEGRLKEA 101
           +  M+ N + PN+ T N +  GYCK G LKEA
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294

[Close]

BLAST of Bhi03G000925 vs. ExPASy Swiss-Prot
Match: Q9FFE3 (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.6e-12
Identity = 34/94 (36.17%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 7   LKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSGEIDRAE 66
           + PN+ T N+LV+A CKK  I  A+ V+  + ++G+ P+ VTY TI       G+++ A+
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246

Query: 67  EIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEA 101
            +++ M D    P+  T  ++  GYCK GR  EA
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280

[Close]

BLAST of Bhi03G000925 vs. NCBI nr
Match: XP_038898467.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Benincasa hispida])

HSP 1 Score: 195.3 bits (495), Expect = 2.6e-46
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           MYR ENLKPNLRT NVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATA AQSG
Sbjct: 125 MYREENLKPNLRTCNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATAHAQSG 184

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
           E DRAEEIIKLMQDNNIQPNQRTC+I+ACGYCKEGRLKEAM
Sbjct: 185 ETDRAEEIIKLMQDNNIQPNQRTCSIVACGYCKEGRLKEAM 225

[Close]

BLAST of Bhi03G000925 vs. NCBI nr
Match: XP_038898466.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Benincasa hispida])

HSP 1 Score: 195.3 bits (495), Expect = 2.6e-46
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           MYR ENLKPNLRT NVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATA AQSG
Sbjct: 203 MYREENLKPNLRTCNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATAHAQSG 262

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
           E DRAEEIIKLMQDNNIQPNQRTC+I+ACGYCKEGRLKEAM
Sbjct: 263 ETDRAEEIIKLMQDNNIQPNQRTCSIVACGYCKEGRLKEAM 303

[Close]

BLAST of Bhi03G000925 vs. NCBI nr
Match: XP_022141338.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Momordica charantia] >XP_022141342.1 pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Momordica charantia] >XP_022141350.1 pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Momordica charantia])

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40
Identity = 84/101 (83.17%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           MYR E LKPNLRT NVLVRAWCKKKKI EAWNVV+NM+ALGIKPDAVTYNTIATA AQSG
Sbjct: 133 MYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAHAQSG 192

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
           E D+AE++I  MQDN I+PNQRTC+I+ACGYCKEGRLKEAM
Sbjct: 193 ETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAM 233

[Close]

BLAST of Bhi03G000925 vs. NCBI nr
Match: XP_022141330.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Momordica charantia])

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40
Identity = 84/101 (83.17%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           MYR E LKPNLRT NVLVRAWCKKKKI EAWNVV+NM+ALGIKPDAVTYNTIATA AQSG
Sbjct: 204 MYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAHAQSG 263

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
           E D+AE++I  MQDN I+PNQRTC+I+ACGYCKEGRLKEAM
Sbjct: 264 ETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAM 304

[Close]

BLAST of Bhi03G000925 vs. NCBI nr
Match: XP_016903528.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 [Cucumis melo])

HSP 1 Score: 172.2 bits (435), Expect = 2.4e-39
Identity = 81/101 (80.20%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           MYR ENLKPNLRT NVLVRAWCKKKKI+EAWNVVQ++ +LGIKPDAVTYNT+ATA AQ+G
Sbjct: 203 MYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATAYAQNG 262

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
           E +RAEEII++MQDNN+QPNQ+TC+I+A GYCKE RLKEAM
Sbjct: 263 ETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKEXRLKEAM 303

[Close]

BLAST of Bhi03G000925 vs. ExPASy TrEMBL
Match: A0A6J1CJL5 (pentatricopeptide repeat-containing protein At5g25630 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011746 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.1e-41
Identity = 84/101 (83.17%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           MYR E LKPNLRT NVLVRAWCKKKKI EAWNVV+NM+ALGIKPDAVTYNTIATA AQSG
Sbjct: 133 MYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAHAQSG 192

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
           E D+AE++I  MQDN I+PNQRTC+I+ACGYCKEGRLKEAM
Sbjct: 193 ETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAM 233

[Close]

BLAST of Bhi03G000925 vs. ExPASy TrEMBL
Match: A0A6J1CHS1 (pentatricopeptide repeat-containing protein At5g25630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011746 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.1e-41
Identity = 84/101 (83.17%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           MYR E LKPNLRT NVLVRAWCKKKKI EAWNVV+NM+ALGIKPDAVTYNTIATA AQSG
Sbjct: 204 MYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVTYNTIATAHAQSG 263

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
           E D+AE++I  MQDN I+PNQRTC+I+ACGYCKEGRLKEAM
Sbjct: 264 ETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKEGRLKEAM 304

[Close]

BLAST of Bhi03G000925 vs. ExPASy TrEMBL
Match: A0A1S4E5M4 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 OS=Cucumis melo OX=3656 GN=LOC103503718 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39
Identity = 81/101 (80.20%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           MYR ENLKPNLRT NVLVRAWCKKKKI+EAWNVVQ++ +LGIKPDAVTYNT+ATA AQ+G
Sbjct: 203 MYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATAYAQNG 262

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
           E +RAEEII++MQDNN+QPNQ+TC+I+A GYCKE RLKEAM
Sbjct: 263 ETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKEXRLKEAM 303

[Close]

BLAST of Bhi03G000925 vs. ExPASy TrEMBL
Match: A0A5D3E700 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006310 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.1e-37
Identity = 76/95 (80.00%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           MYR ENLKPNLRT NVLVRAWCKKKKI+EAWNVVQ++ +LGIKPDAVTYNT+ATA AQ+G
Sbjct: 203 MYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATAYAQNG 262

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEG 96
           E +RAEEII++MQDNN+QPNQ+TC+I+A GYCKEG
Sbjct: 263 ETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKEG 297

[Close]

BLAST of Bhi03G000925 vs. ExPASy TrEMBL
Match: A0A6A1UZB7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G028485 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.0e-33
Identity = 70/101 (69.31%), Postives = 83/101 (82.18%), Query Frame = 0


Query: 1   MYRGENLKPNLRTVNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATACAQSG 60
           M + EN+KPNLRT NVLVRAWCKK   AEAWN+V  MVA G++PDAVTYNTI+TA AQ+G
Sbjct: 266 MTQEENVKPNLRTYNVLVRAWCKKNNTAEAWNLVDKMVASGMQPDAVTYNTISTAYAQNG 325

Query: 61  EIDRAEEIIKLMQDNNIQPNQRTCNIMACGYCKEGRLKEAM 102
           E DRAE +I  MQ NN+QPN+RTC I+  GYCKEG+LKEA+
Sbjct: 326 ETDRAEGMILEMQKNNVQPNERTCGIIVSGYCKEGKLKEAL 366

The following BLAST results are available for this feature:

BLAST of Bhi03G000925 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25630.1	2.1e-25	53.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G25630.2	2.1e-25	53.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G21222.1	6.1e-25	50.98	protein kinase family protein	[more]
AT1G05670.1	8.2e-14	39.78	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	8.2e-14	39.78	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

BLAST of Bhi03G000925 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZ63	2.9e-24	53.68	Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX...	[more]
Q8S9D1	8.5e-24	50.98	Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	1.2e-12	39.78	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9ZVX5	1.5e-12	40.22	Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX...	[more]
Q9FFE3	2.6e-12	36.17	Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidop...	[more]

BLAST of Bhi03G000925 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898467.1	2.6e-46	94.06	pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Benincasa hisp...	[more]
XP_038898466.1	2.6e-46	94.06	pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Benincasa hisp...	[more]
XP_022141338.1	1.3e-40	83.17	pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Momordica char...	[more]
XP_022141330.1	1.3e-40	83.17	pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Momordica char...	[more]
XP_016903528.1	2.4e-39	80.20	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g...	[more]

BLAST of Bhi03G000925 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJL5	6.1e-41	83.17	pentatricopeptide repeat-containing protein At5g25630 isoform X2 OS=Momordica ch...	[more]
A0A6J1CHS1	6.1e-41	83.17	pentatricopeptide repeat-containing protein At5g25630 isoform X1 OS=Momordica ch...	[more]
A0A1S4E5M4	1.2e-39	80.20	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 OS=Cu...	[more]
A0A5D3E700	4.1e-37	80.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6A1UZB7	8.0e-33	69.31	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G028485 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 33..86 e-value: 1.9E-12 score: 47.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 13..46 e-value: 7.5E-7 score: 26.9 coord: 47..80 e-value: 1.3E-8 score: 32.5 coord: 83..101 e-value: 1.8E-4 score: 19.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 10..44 score: 10.994242
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 45..79 score: 12.090371
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..102 e-value: 1.7E-30 score: 107.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 13..101
None	No IPR available	PANTHER	PTHR47931	OS01G0228400 PROTEIN	coord: 1..101
None	No IPR available	PANTHER	PTHR47931:SF1	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000925	Bhi03M000925	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding