Bhi03G000923 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000923
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	PLAT domain-containing protein
Location	chr3: 24889056 .. 24889438 (-)
RNA-Seq Expression	Bhi03G000923
Synteny	Bhi03G000923

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAATCTGCCCTTTTCCTCTCCATTCTCCTTTCATTCTCTGCTATAGCTTTCTCCGATGTATTTCCACTAACTCTGTTTTTTTCCTCTGATTTCGTATCTTGATTCTTGAGTGAGGAAAGAAAAAAATTGACTGATACAGATTTTGGATTTGGTTGATGCAGGATCCAGATTGCGTGTACACGGTGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTTATTACGGCCACGCTCTACACGGCGCAAGGGAAGAGATACCGGGTTGATGGGACCCAATACAACTACTTCGAGAGGGGCAATCTGGACATTTTTCAAGCGGAAGAGGGACCATGCTCTGAGCGACCGGTGTGTTCATTGAACTGA

mRNA sequence

ATGGCTTCCAAATCTGCCCTTTTCCTCTCCATTCTCCTTTCATTCTCTGCTATAGCTTTCTCCGATGATCCAGATTGCGTGTACACGGTGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTTATTACGGCCACGCTCTACACGGCGCAAGGGAAGAGATACCGGGTTGATGGGACCCAATACAACTACTTCGAGAGGGGCAATCTGGACATTTTTCAAGCGGAAGAGGGACCATGCTCTGAGCGACCGGTGTGTTCATTGAACTGA

Coding sequence (CDS)

ATGGCTTCCAAATCTGCCCTTTTCCTCTCCATTCTCCTTTCATTCTCTGCTATAGCTTTCTCCGATGATCCAGATTGCGTGTACACGGTGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTTATTACGGCCACGCTCTACACGGCGCAAGGGAAGAGATACCGGGTTGATGGGACCCAATACAACTACTTCGAGAGGGGCAATCTGGACATTTTTCAAGCGGAAGAGGGACCATGCTCTGAGCGACCGGTGTGTTCATTGAACTGA

Protein sequence

MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRVDGTQYNYFERGNLDIFQAEEGPCSERPVCSLN

Homology

[Close]

BLAST of Bhi03G000923 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 94.0 bits (232), Expect = 6.8e-20
Identity = 53/104 (50.96%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 1   MASKSAL--FLSILLSFSAIAFS-DDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKR 60
           MA +  L  FL +L + SA+AF+ DDPDCVYT Y+RTGSI KAGTDS+I+A +Y   G  
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  YRVD---------GTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
             +          G  YNYFERGNLDIF     PC   P+C+LN
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSG-RAPCLPSPICALN 103

[Close]

BLAST of Bhi03G000923 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-17
Identity = 51/105 (48.57%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 1   MASKSALFLSILL---SFSAIAFSDD-PDCVYTVYIRTGSILKAGTDSVITATLYTAQGK 60
           M  +  LFLS+LL   + SA+A +DD  DCVYT ++RTGS  KAGTDS+I+A +Y   G 
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 61  RYRVD---------GTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
              +          G  YNY+ERGNLDIF   + PC   PVCSLN
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSG-KAPCLPSPVCSLN 105

[Close]

BLAST of Bhi03G000923 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.6e-19
Identity = 53/104 (50.96%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 1   MASKSAL--FLSILLSFSAIAFS-DDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKR 60
           MA +  L  FL +L + SA+AF+ DDPDCVYT Y+RTGSI KAGTDS+I+A +Y   G  
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  YRVD---------GTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
             +          G  YNYFERGNLDIF     PC   P+C+LN
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSG-RAPCLPSPICALN 103

[Close]

BLAST of Bhi03G000923 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-16
Identity = 51/105 (48.57%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 1   MASKSALFLSILL---SFSAIAFSDD-PDCVYTVYIRTGSILKAGTDSVITATLYTAQGK 60
           M  +  LFLS+LL   + SA+A +DD  DCVYT ++RTGS  KAGTDS+I+A +Y   G 
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 61  RYRVD---------GTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
              +          G  YNY+ERGNLDIF   + PC   PVCSLN
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSG-KAPCLPSPVCSLN 105

[Close]

BLAST of Bhi03G000923 vs. NCBI nr
Match: XP_004143473.2 (PLAT domain-containing protein 1 [Cucumis sativus] >KGN48760.1 hypothetical protein Csa_003522 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 4.9e-28
Identity = 74/101 (73.27%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           MA+KSALF SILLSFSAIAFSD+PDCVYTVYIRTGSILKAGTDSVITATLYTA G   R+
Sbjct: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86

Query: 61  ---------DGTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLDIF    GPC   PVCSLN
Sbjct: 87  MDLEKWGGLMGPGYNYFERGNLDIFSG-RGPCLSGPVCSLN 126

[Close]

BLAST of Bhi03G000923 vs. NCBI nr
Match: XP_008440608.1 (PREDICTED: lipoxygenase homology domain-containing protein 1 [Cucumis melo] >KAA0036292.1 lipoxygenase-like proteiny domain-containing protein 1 [Cucumis melo var. makuwa] >TYK12686.1 lipoxygenase-like proteiny domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 72/101 (71.29%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           MA+KS LF + LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTA G   R+
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 61  ---------DGTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLDIF    GPC   PVCSLN
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSG-RGPCLSGPVCSLN 100

[Close]

BLAST of Bhi03G000923 vs. NCBI nr
Match: XP_004143474.1 (PLAT domain-containing protein 1 [Cucumis sativus] >KGN48761.1 hypothetical protein Csa_004285 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-26
Identity = 71/101 (70.30%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           MA KS LFLSILLSFSAIAFSDD DCVYTVYIRTGS LKAGTDSVI ATLY+A G   R+
Sbjct: 1   MAYKSLLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSVIAATLYSADGDEVRI 60

Query: 61  D---------GTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLDIF    GPC   PVCSLN
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSG-RGPCLSGPVCSLN 100

[Close]

BLAST of Bhi03G000923 vs. NCBI nr
Match: XP_008440610.1 (PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 127.5 bits (319), Expect = 6.0e-26
Identity = 70/101 (69.31%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           MA KS LFLSILLSFSAIAFSDD DCVYTVYIRTGS LKAGTDS I ATLY+A G   R+
Sbjct: 1   MAYKSPLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSAIAATLYSADGDEVRI 60

Query: 61  D---------GTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLDIF    GPC   PVCSLN
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSG-RGPCLSGPVCSLN 100

[Close]

BLAST of Bhi03G000923 vs. NCBI nr
Match: XP_038883182.1 (PLAT domain-containing protein 3 [Benincasa hispida])

HSP 1 Score: 124.8 bits (312), Expect = 3.9e-25
Identity = 68/101 (67.33%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           M SKSALFLSILLSFSA AFSDDP CVYTVYIRTGS LKAGTDSVI+ATLY+ QG    +
Sbjct: 1   MPSKSALFLSILLSFSATAFSDDPGCVYTVYIRTGSTLKAGTDSVISATLYSGQGDLVLI 60

Query: 61  D---------GTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLD+F    GPC   PVC LN
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDVFSG-RGPCLTGPVCGLN 100

[Close]

BLAST of Bhi03G000923 vs. ExPASy TrEMBL
Match: A0A0A0KGA0 (PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500520 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 74/101 (73.27%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           MA+KSALF SILLSFSAIAFSD+PDCVYTVYIRTGSILKAGTDSVITATLYTA G   R+
Sbjct: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86

Query: 61  ---------DGTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLDIF    GPC   PVCSLN
Sbjct: 87  MDLEKWGGLMGPGYNYFERGNLDIFSG-RGPCLSGPVCSLN 126

[Close]

BLAST of Bhi03G000923 vs. ExPASy TrEMBL
Match: A0A5A7SYJ2 (Lipoxygenase-like proteiny domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002740 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.9e-28
Identity = 72/101 (71.29%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           MA+KS LF + LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTA G   R+
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 61  ---------DGTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLDIF    GPC   PVCSLN
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSG-RGPCLSGPVCSLN 100

[Close]

BLAST of Bhi03G000923 vs. ExPASy TrEMBL
Match: A0A1S3B1J7 (lipoxygenase homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103484981 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.9e-28
Identity = 72/101 (71.29%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           MA+KS LF + LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTA G   R+
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 61  ---------DGTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLDIF    GPC   PVCSLN
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSG-RGPCLSGPVCSLN 100

[Close]

BLAST of Bhi03G000923 vs. ExPASy TrEMBL
Match: A0A0A0KLY3 (PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500530 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26
Identity = 71/101 (70.30%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           MA KS LFLSILLSFSAIAFSDD DCVYTVYIRTGS LKAGTDSVI ATLY+A G   R+
Sbjct: 1   MAYKSLLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSVIAATLYSADGDEVRI 60

Query: 61  D---------GTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLDIF    GPC   PVCSLN
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSG-RGPCLSGPVCSLN 100

[Close]

BLAST of Bhi03G000923 vs. ExPASy TrEMBL
Match: A0A1S3B1I1 (lipoxygenase homology domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC107990289 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.9e-26
Identity = 70/101 (69.31%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAQGKRYRV 60
           MA KS LFLSILLSFSAIAFSDD DCVYTVYIRTGS LKAGTDS I ATLY+A G   R+
Sbjct: 1   MAYKSPLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSAIAATLYSADGDEVRI 60

Query: 61  D---------GTQYNYFERGNLDIFQAEEGPCSERPVCSLN 93
                     G  YNYFERGNLDIF    GPC   PVCSLN
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSG-RGPCLSGPVCSLN 100

The following BLAST results are available for this feature:

BLAST of Bhi03G000923 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39730.1	6.8e-20	50.96	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	1.1e-17	48.57	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

BLAST of Bhi03G000923 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65660	9.6e-19	50.96	PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 S...	[more]
Q9SIE7	1.5e-16	48.57	PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 S...	[more]

BLAST of Bhi03G000923 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143473.2	4.9e-28	73.27	PLAT domain-containing protein 1 [Cucumis sativus] >KGN48760.1 hypothetical prot...	[more]
XP_008440608.1	1.4e-27	71.29	PREDICTED: lipoxygenase homology domain-containing protein 1 [Cucumis melo] >KAA...	[more]
XP_004143474.1	2.1e-26	70.30	PLAT domain-containing protein 1 [Cucumis sativus] >KGN48761.1 hypothetical prot...	[more]
XP_008440610.1	6.0e-26	69.31	PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis melo]	[more]
XP_038883182.1	3.9e-25	67.33	PLAT domain-containing protein 3 [Benincasa hispida]	[more]

BLAST of Bhi03G000923 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGA0	2.4e-28	73.27	PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500520 PE=4 S...	[more]
A0A5A7SYJ2	6.9e-28	71.29	Lipoxygenase-like proteiny domain-containing protein 1 OS=Cucumis melo var. maku...	[more]
A0A1S3B1J7	6.9e-28	71.29	lipoxygenase homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KLY3	1.0e-26	70.30	PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500530 PE=4 S...	[more]
A0A1S3B1I1	2.9e-26	69.31	lipoxygenase homology domain-containing protein 1-like OS=Cucumis melo OX=3656 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 14..87 e-value: 3.2E-8 score: 35.3
None	No IPR available	PANTHER	PTHR31718:SF48	PLAT-PLANT-STRESS PROTEIN	coord: 6..92
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 6..92
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 28..77 e-value: 1.2E-5 score: 25.8
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 26..92 score: 13.936378
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 24..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000923	Bhi03M000923	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding