Bhi03G000668 (gene) Wax gourd (B227) v1

Overview
NameBhi03G000668
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr3: 16815392 .. 16816037 (+)
RNA-Seq ExpressionBhi03G000668
SyntenyBhi03G000668
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGAGAAAGGGGTTTCGGGGTTCTTTTGATTATTGGAATTGTGTTGATCAGCATTTACTTGGTTGAGGTTGAGGGGAAGGAGGTGAAGGCTTTTGAAACAAGTGAGAATCTTGGCACTACATCCAATCAATGGTCTAATTCGGATGAAAGCCTCTATGGAGTTGGTTTAACGGGAAGAAATGTGACTGTTAGTGGCGGCAAGGGTGGAGGAAATTCATCGGGTGAGGGCCACGGAGGCGGCGGTGGTGGTGGGGTAAGAAAGAAAGATGTAAAACATAATAAAAAACATAAAAATAAGCAGAAACGGGCGGGGGAGGCGGCGGAGGCGGCAATGGCGGTGGGTGGAGGCGGCGGTGGCAATGGCGGTGGTGGAGGAGGGGGAGGCGGCAGTGGTGGTGGAGGTGGCGGCGGAGGGGGAAATGGAAGAGGCTTAGGATGGGGAGAGGGCAGTGGAGGTGTGGCGGCGGTGGAGGGGGAGGAGGTGAGGTGGTGGCGGTGAGGAGGAGGAAGTGGTGGCGGCGGAGGTGGAGGTGGAGGTGGAGGCGGAGGAAGTGGTGGAGGATGGGGTTTTGGCGGAGGAGGGAGTAGAGGTTTTTGTTGGACTTGGGGATGTGGTGGCGGCCGTCATGGAAAAGCATTAG

mRNA sequence

ATGTTGAGAGAAAGGGGTTTCGGGGTTCTTTTGATTATTGGAATTGTGTTGATCAGCATTTACTTGGTTGAGGTTGAGGGGAAGGAGGTGAAGGCTTTTGAAACAAGTGAGAATCTTGGCACTACATCCAATCAATGGTCTAATTCGGATGAAAGCCTCTATGGAGTTGGTTTAACGGGAAGAAATGTGACTGTTAGTGGCGGCAAGGGTGGAGGAAATTCATCGGGTGAGGGCCACGGAGGCGGCGGTGGTGGTGGGGTAAGAAAGAAAGATGCGGCGGAGGCGGCAATGGCGGTGGGTGGAGGCGGCGGTGGCAATGGCGGTGGTGGAGGAGGGGGAGGCGGCAGTGGTGGTGGAGGTGGCGGCGGAGGGGGAAATGGAAGAGGCTTAGGATGGGGAGAGGGCAGTGGAGGTGTGGCGGCGGTGGAGGGGGAGGAGGAGGAAGTGGTGGCGGCGGAGGTGGAGGTGGAGGTGGAGGCGGAGGAAGTGGTGGAGGATGGGGTTTTGGCGGAGGAGGGAGTAGAGGTTTTTGTTGGACTTGGGGATGTGGTGGCGGCCGTCATGGAAAAGCATTAG

Coding sequence (CDS)

ATGTTGAGAGAAAGGGGTTTCGGGGTTCTTTTGATTATTGGAATTGTGTTGATCAGCATTTACTTGGTTGAGGTTGAGGGGAAGGAGGTGAAGGCTTTTGAAACAAGTGAGAATCTTGGCACTACATCCAATCAATGGTCTAATTCGGATGAAAGCCTCTATGGAGTTGGTTTAACGGGAAGAAATGTGACTGTTAGTGGCGGCAAGGGTGGAGGAAATTCATCGGGTGAGGGCCACGGAGGCGGCGGTGGTGGTGGGGTAAGAAAGAAAGATGCGGCGGAGGCGGCAATGGCGGTGGGTGGAGGCGGCGGTGGCAATGGCGGTGGTGGAGGAGGGGGAGGCGGCAGTGGTGGTGGAGGTGGCGGCGGAGGGGGAAATGGAAGAGGCTTAGGATGGGGAGAGGGCAGTGGAGGTGTGGCGGCGGTGGAGGGGGAGGAGGAGGAAGTGGTGGCGGCGGAGGTGGAGGTGGAGGTGGAGGCGGAGGAAGTGGTGGAGGATGGGGTTTTGGCGGAGGAGGGAGTAGAGGTTTTTGTTGGACTTGGGGATGTGGTGGCGGCCGTCATGGAAAAGCATTAG

Protein sequence

MLRERGFGVLLIIGIVLISIYLVEVEGKEVKAFETSENLGTTSNQWSNSDESLYGVGLTGRNVTVSGGKGGGNSSGEGHGGGGGGGVRKKDAAEAAMAVGGGGGGNGGGGGGGGGSGGGGGGGGGNGRGLGWGEGSGGVAAVEGEEEEVVAAEVEVEVEAEEVVEDGVLAEEGVEVFVGLGDVVAAVMEKH
Homology
BLAST of Bhi03G000668 vs. NCBI nr
Match: XP_038882243.1 (glycine-rich protein DOT1-like [Benincasa hispida])

HSP 1 Score: 214.2 bits (544), Expect = 1.0e-51
Identity = 146/162 (90.12%), Postives = 146/162 (90.12%), Query Frame = 0

Query: 1   MLRERGFGVLLIIGIVLISIYLVEVEGKEVKAFETSENLGTTSNQWSNSDESLYGVGLTG 60
           MLRERGFGVLLIIGIVLISIYLVEVEGKEVKAFETSENLGTTSNQWSNSDESLYGVGLTG
Sbjct: 1   MLRERGFGVLLIIGIVLISIYLVEVEGKEVKAFETSENLGTTSNQWSNSDESLYGVGLTG 60

Query: 61  RNVTVSGGKGGGNSSGEGHGGGGGGGVRKKD----------------AAEAAMAVGGGGG 120
           RNVTVSGGKGGGNSSGEGHGGGGGGGVRKKD                AAEAAMAVGGGGG
Sbjct: 61  RNVTVSGGKGGGNSSGEGHGGGGGGGVRKKDVKHNKKHKNKQKRAGEAAEAAMAVGGGGG 120

Query: 121 GNGGGGGGGGGSGGGGGGGGGNGRGLGWGEGSGGVAAVEGEE 147
           GNGGGGGGGGGSGGGGGGGGGNGRGLGWGEGSGGVAAVEGEE
Sbjct: 121 GNGGGGGGGGGSGGGGGGGGGNGRGLGWGEGSGGVAAVEGEE 162

BLAST of Bhi03G000668 vs. NCBI nr
Match: KAE8647602.1 (hypothetical protein Csa_004179 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-15
Identity = 100/206 (48.54%), Postives = 113/206 (54.85%), Query Frame = 0

Query: 1   MLRERGFGVLLIIGIVLISIYLVEVEGKEVKAFETSENLGTTSNQWSNSDESLYGVGLTG 60
           M  ERG GVLL +GIVLISIYL  VEGKEVK+F+ +E++G+TSN WS+ +ES     L G
Sbjct: 1   MKSERGSGVLLFLGIVLISIYL--VEGKEVKSFKINESVGSTSNGWSDLNES-----LRG 60

Query: 61  RNVTVSGGKGGGNSSGEGHGGGGGG-----GVRKKDAAEAAMAVGGGGGGNGGGGGGGGG 120
           RN+T+SGGKGG NSSGEGHGGGGGG     GVRKKD          G  GNGGG      
Sbjct: 61  RNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTKHNKK---HGKSGNGGG------ 120

Query: 121 SGGGGGGGGGNGRGLGWGEGSGGVAAVEGEEEEVVAAEVEVEVEAEEVVEDGV-----LA 180
                            GEG G + AVE E       EVE E + E V            
Sbjct: 121 -----------------GEGVGAMVAVEVEAARAEVVEVEGEGKWERVWMGRSGGGWGFG 173

Query: 181 EEGVEVFVGLGDVVAA-----VMEKH 192
           EEG E FVG GDV  A     VMEKH
Sbjct: 181 EEGAEGFVGFGDVAGAAAAVTVMEKH 173

BLAST of Bhi03G000668 vs. NCBI nr
Match: KAG6603927.1 (hypothetical protein SDJN03_04536, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.7 bits (143), Expect = 3.2e-05
Identity = 86/167 (51.50%), Postives = 96/167 (57.49%), Query Frame = 0

Query: 1   MLRERGFGVLLIIGIVLISIYLVEVEGKEVKAFETSENLGTTSNQWSNSD-ESLYGVGLT 60
           M R RG GVLL++GIVL S+YLVE     VK FE S  +G  SN+WS  D     GVG++
Sbjct: 39  MERGRGCGVLLVVGIVL-SLYLVE----GVKGFERSGRVG-ASNEWSKLDGRPFEGVGVS 98

Query: 61  GRNVTVSGGK-----------GGGNSSGEGHGGGGGG--------GVRKKDAAEAAM--- 120
           GRN TV+GG+           GGG   G G GGGGGG        GVRKKD   +     
Sbjct: 99  GRNATVNGGRDSVKRGITNGGGGGGGGGGGGGGGGGGAGGEGSGVGVRKKDTKHSKKHGK 158

Query: 121 -AVGGGGGGNGGGG-----GGGGGSGGGGGGGGGNGRGLGWGEGSGG 139
              GGGGGG GGGG     GGGGG GGGGGGGGG G G G G G GG
Sbjct: 159 GGNGGGGGGGGGGGKGYGWGGGGGGGGGGGGGGGGGGGGGGGGGGGG 199

BLAST of Bhi03G000668 vs. ExPASy TrEMBL
Match: A0A0A0KGL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504700 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.9e-24
Identity = 118/209 (56.46%), Postives = 130/209 (62.20%), Query Frame = 0

Query: 1   MLRERGFGVLLIIGIVLISIYLVEVEGKEVKAFETSENLGTTSNQWSNSDESLYGVGLTG 60
           M  ERG GVLL +GIVLISIYL  VEGKEVK+F+ +E++G+TSN WS+ +ES     L G
Sbjct: 1   MKSERGSGVLLFLGIVLISIYL--VEGKEVKSFKINESVGSTSNGWSDLNES-----LRG 60

Query: 61  RNVTVSGGKGGGNSSGEGHGGGGGG-----GVRKKDAAEAAM-------AVGGGGGGNGG 120
           RN+T+SGGKGG NSSGEGHGGGGGG     GVRKKD               GGGGGGNGG
Sbjct: 61  RNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTKHNKKHGKSGNGGGGGGGGGNGG 120

Query: 121 GGGGGG-GSGGGGGGGGGNGRGLGWGEGSGGVAAVEGEEEEVVAAEVEVEVEAEEVVEDG 180
           GGGGGG G GGGGGGGGGNG+G GWG                             VVEDG
Sbjct: 121 GGGGGGAGGGGGGGGGGGNGKGYGWG----------------------------GVVEDG 174

Query: 181 VLAEEGVEVFVGLGDVVAA-----VMEKH 192
           VL EEG E FVG GDV  A     VMEKH
Sbjct: 181 VLGEEGAEGFVGFGDVAGAAAAVTVMEKH 174

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038882243.11.0e-5190.12glycine-rich protein DOT1-like [Benincasa hispida][more]
KAE8647602.11.2e-1548.54hypothetical protein Csa_004179 [Cucumis sativus][more]
KAG6603927.13.2e-0551.50hypothetical protein SDJN03_04536, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A0A0KGL81.9e-2456.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504700 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M000668Bhi03M000668mRNA