Bhi03G000603 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000603
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RSN1_7TM domain-containing protein
Location	chr3: 14988859 .. 14990103 (+)
RNA-Seq Expression	Bhi03G000603
Synteny	Bhi03G000603

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTAAATCAAGAGTTTATATGCCCAGATTTAGGTAGTTTGTTCAATTTTTTCTTTCGTTTTAAGAAAAAGTTAGCTTAGGCTGACTTTGATGCTGACTGTAAACAAAGGATCCAAAGATTTGTGTTTATGGAAAAAAGGCACATGATTTTCGCCAATTGAGAGAAATTTTGGTAAAGTTTTGAATGAAGAAAATGTGGATGAACCAAATAATTTGTAGGGAGAAGAGAAAAACTAGGAAGAAATCAAATAAACTCAGGAAGTCTCAGATGCTCCTACAACTTCTCTTTGCCAAGTAAATTCTCTCTTTCCCTATAACTCTCTAACATGTGGCCTATCTACATACACTCCAATTCTACATGGTATAAATCAAAATTCATGTTCGATTTTGAGTACTAACTTGCCATCTTGTCTTTTCACTTGTGACACTTGCAAAAACAATTCGAAAGAAAGAAGCAAGAAACAAGAAACAAGAAGGAGATGTATCATATAGCAACCAAAAGCAATCTTGTTGATTCAGGTCTTCAAACAGATCAACTCGGTTTCAAAGACAACAATAGCCTCCCTCTTTGTCCCAAGCCACGTCGTCTCGAACCTGTCATCCCGAGTTTCCTCGCCCCTCTCGGATGTGCTCATCACGTTCATAGGTCACTTTCTCATTTTGTTCTTGTTCAACTTTACGAATTAAGCTCCCCCCTCACATTCGCTTAATTTGTTTGTCTTTCTTTCACCAGCCAATCAAGTGGCGATACGAGGAGTGGGATTCTCAATATCATCGCAGGAAAGGTCAGAAAATGGATTCTTTTTTGCGAAATATTGTGAAATCCTCAACAAAAGTGAATTCACGTGATGGACATTGTTCTTTTATGTGTGCAGCATGTTGAAGGGAGAGATTGTTTGTGCTCTGGTTGCTACCCGTCGTGTTATTCGGGTTCTCCGCCGGGAAGAACGGAGAATCCATTGGTTCACGACGTGTATTTTCTTCATCAAATGGAGATTCATTCACCATTTTCAAGGACCAATCTCTCAGATAAGTTCAGCCTGACCTCTGCCTCACCTACATGAACAGAACAAAGAAGCCATTGCAGGAGTGGATAAAGATATATTGGCTGTTTTATCATTTATGTAGATTTTGTTAGTGAGTTTACATTTTTTTTTTTCTTTTGAAGCAAATAGTGAGTTTACTTACTTGTACAATCTTCATTTATTGATTTTTGGGTCTTCATAATTGTAAATACAAAGAGGG

mRNA sequence

GTTTAAATCAAGAGTTTATATGCCCAGATTTAGGTAGTTTGTTCAATTTTTTCTTTCGTTTTAAGAAAAAGTTAGCTTAGGCTGACTTTGATGCTGACTGTAAACAAAGGATCCAAAGATTTGTGTTTATGGAAAAAAGGCACATGATTTTCGCCAATTGAGAGAAATTTTGGTAAAGTTTTGAATGAAGAAAATGTGGATGAACCAAATAATTTGTAGGGAGAAGAGAAAAACTAGGAAGAAATCAAATAAACTCAGGAAGTCTCAGATGCTCCTACAACTTCTCTTTGCCAAAAAGAAGCAAGAAACAAGAAACAAGAAGGAGATGTATCATATAGCAACCAAAAGCAATCTTGTTGATTCAGGTCTTCAAACAGATCAACTCGGTTTCAAAGACAACAATAGCCTCCCTCTTTGTCCCAAGCCACGTCGTCTCGAACCTGTCATCCCGAGTTTCCTCGCCCCTCTCGGATGTGCTCATCACGTTCATAGCCAATCAAGTGGCGATACGAGGAGTGGGATTCTCAATATCATCGCAGGAAAGCATGTTGAAGGGAGAGATTGTTTGTGCTCTGGTTGCTACCCGTCGTGTTATTCGGGTTCTCCGCCGGGAAGAACGGAGAATCCATTGGTTCACGACGTGTATTTTCTTCATCAAATGGAGATTCATTCACCATTTTCAAGGACCAATCTCTCAGATAAGTTCAGCCTGACCTCTGCCTCACCTACATGAACAGAACAAAGAAGCCATTGCAGGAGTGGATAAAGATATATTGGCTGTTTTATCATTTATGTAGATTTTGTTAGTGAGTTTACATTTTTTTTTTTCTTTTGAAGCAAATAGTGAGTTTACTTACTTGTACAATCTTCATTTATTGATTTTTGGGTCTTCATAATTGTAAATACAAAGAGGG

Coding sequence (CDS)

ATGAAGAAAATGTGGATGAACCAAATAATTTGTAGGGAGAAGAGAAAAACTAGGAAGAAATCAAATAAACTCAGGAAGTCTCAGATGCTCCTACAACTTCTCTTTGCCAAAAAGAAGCAAGAAACAAGAAACAAGAAGGAGATGTATCATATAGCAACCAAAAGCAATCTTGTTGATTCAGGTCTTCAAACAGATCAACTCGGTTTCAAAGACAACAATAGCCTCCCTCTTTGTCCCAAGCCACGTCGTCTCGAACCTGTCATCCCGAGTTTCCTCGCCCCTCTCGGATGTGCTCATCACGTTCATAGCCAATCAAGTGGCGATACGAGGAGTGGGATTCTCAATATCATCGCAGGAAAGCATGTTGAAGGGAGAGATTGTTTGTGCTCTGGTTGCTACCCGTCGTGTTATTCGGGTTCTCCGCCGGGAAGAACGGAGAATCCATTGGTTCACGACGTGTATTTTCTTCATCAAATGGAGATTCATTCACCATTTTCAAGGACCAATCTCTCAGATAAGTTCAGCCTGACCTCTGCCTCACCTACATGA

Protein sequence

MKKMWMNQIICREKRKTRKKSNKLRKSQMLLQLLFAKKKQETRNKKEMYHIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSGDTRSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSRTNLSDKFSLTSASPT

Homology

[Close]

BLAST of Bhi03G000603 vs. NCBI nr
Match: XP_038881848.1 (uncharacterized protein LOC120073212 [Benincasa hispida])

HSP 1 Score: 371.7 bits (953), Expect = 3.6e-99
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MKKMWMNQIICREKRKTRKKSNKLRKSQMLLQLLFAKKKQETRNKKEMYHIATKSNLVDS 60
           MKKMWMNQIICREKRKTRKKSNKLRKSQMLLQLLFAKKKQETRNKKEMYHIATKSNLVDS
Sbjct: 1   MKKMWMNQIICREKRKTRKKSNKLRKSQMLLQLLFAKKKQETRNKKEMYHIATKSNLVDS 60

Query: 61  GLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSGDTRSGILNIIAGK 120
           GLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSGDTRSGILNIIAGK
Sbjct: 61  GLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSGDTRSGILNIIAGK 120

Query: 121 HVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSRTNLSDKFSLTSAS 180
           HVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSRTNLSDKFSLTSAS
Sbjct: 121 HVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSRTNLSDKFSLTSAS 180

Query: 181 PT 183
           PT
Sbjct: 181 PT 182

[Close]

BLAST of Bhi03G000603 vs. NCBI nr
Match: XP_031743884.1 (uncharacterized protein LOC116404717 [Cucumis sativus] >KGN48953.1 hypothetical protein Csa_003840 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 1.9e-63
Identity = 118/135 (87.41%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 48  MYHIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSG 107
           M+H ATKSNLVDS L+T+Q GFKDNN LPLCPKPRRLEP IPSFLAPL CAHH+HSQSSG
Sbjct: 1   MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSG 60

Query: 108 DTRSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSR 167
           D+RS ILNII GK+VEGRDCL SGCYPSCYSGSPPGRTENPLVHD+YFLHQMEIHSPFSR
Sbjct: 61  DSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTENPLVHDMYFLHQMEIHSPFSR 120

Query: 168 TNLSDKFSLTSASPT 183
           TNLSDKF+LTSASPT
Sbjct: 121 TNLSDKFNLTSASPT 135

[Close]

BLAST of Bhi03G000603 vs. NCBI nr
Match: KAA0025640.1 (hypothetical protein E6C27_scaffold253G001330 [Cucumis melo var. makuwa] >TYK12513.1 hypothetical protein E5676_scaffold255G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 244.6 bits (623), Expect = 6.7e-61
Identity = 113/135 (83.70%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 48  MYHIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSG 107
           M+HIATKSNLVDS L+T+Q GFKDNN LPLCPKPRRLEP IPSFL PL CAHH+HSQSSG
Sbjct: 1   MHHIATKSNLVDSDLETNQPGFKDNNGLPLCPKPRRLEPAIPSFLVPLRCAHHIHSQSSG 60

Query: 108 DTRSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSR 167
           D+RS +LNII GK+VE RDC  SGCYPSCYSGSPPGRTENPLVHD+YFLHQMEI S FSR
Sbjct: 61  DSRSEVLNIIEGKNVEARDCFSSGCYPSCYSGSPPGRTENPLVHDMYFLHQMEIRSSFSR 120

Query: 168 TNLSDKFSLTSASPT 183
           TNLSDKF+LTSASPT
Sbjct: 121 TNLSDKFNLTSASPT 135

[Close]

BLAST of Bhi03G000603 vs. NCBI nr
Match: XP_022133306.1 (uncharacterized protein LOC111005918 [Momordica charantia])

HSP 1 Score: 209.5 bits (532), Expect = 2.4e-50
Identity = 101/133 (75.94%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 50  HIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSGDT 109
           HIATKSNLVDS  +T+     + N LPLCPKPRR  P IP+FL PL CA  +HSQSSG+ 
Sbjct: 5   HIATKSNLVDSSPETN----NNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHSQSSGEG 64

Query: 110 RSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSRTN 169
           R+GILNIIAGK+VEGRDCLCS CYPSCYSGSPP RTENPLVHDVYFLHQME+ SPFS T 
Sbjct: 65  RNGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTK 124

Query: 170 LSDKFSLTSASPT 183
           LS+KFSLTSASPT
Sbjct: 125 LSEKFSLTSASPT 133

[Close]

BLAST of Bhi03G000603 vs. NCBI nr
Match: KAG6594753.1 (hypothetical protein SDJN03_11306, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.0 bits (489), Expect = 2.3e-45
Identity = 92/123 (74.80%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 46  KEMYHIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQS 105
           K M+HIA KSNLVDS  +T      D+N+ PLCPKPRRL P IPSFLAP  CAH +HSQS
Sbjct: 2   KNMHHIAAKSNLVDSSPET------DHNAPPLCPKPRRLRPAIPSFLAPFRCAHRIHSQS 61

Query: 106 SGDTRSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPF 165
           S D RS ILNIIAGK VEGRDCLC  CYPSCYSGSPPGRT NPLV DVYFLHQ+EI SPF
Sbjct: 62  SSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLVQDVYFLHQVEIQSPF 118

Query: 166 SRT 169
           SRT
Sbjct: 122 SRT 118

[Close]

BLAST of Bhi03G000603 vs. ExPASy TrEMBL
Match: A0A0A0KHD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507270 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.1e-64
Identity = 118/135 (87.41%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 48  MYHIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSG 107
           M+H ATKSNLVDS L+T+Q GFKDNN LPLCPKPRRLEP IPSFLAPL CAHH+HSQSSG
Sbjct: 1   MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSG 60

Query: 108 DTRSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSR 167
           D+RS ILNII GK+VEGRDCL SGCYPSCYSGSPPGRTENPLVHD+YFLHQMEIHSPFSR
Sbjct: 61  DSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTENPLVHDMYFLHQMEIHSPFSR 120

Query: 168 TNLSDKFSLTSASPT 183
           TNLSDKF+LTSASPT
Sbjct: 121 TNLSDKFNLTSASPT 135

[Close]

BLAST of Bhi03G000603 vs. ExPASy TrEMBL
Match: A0A5D3CKV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00940 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.2e-61
Identity = 113/135 (83.70%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 48  MYHIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSG 107
           M+HIATKSNLVDS L+T+Q GFKDNN LPLCPKPRRLEP IPSFL PL CAHH+HSQSSG
Sbjct: 1   MHHIATKSNLVDSDLETNQPGFKDNNGLPLCPKPRRLEPAIPSFLVPLRCAHHIHSQSSG 60

Query: 108 DTRSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSR 167
           D+RS +LNII GK+VE RDC  SGCYPSCYSGSPPGRTENPLVHD+YFLHQMEI S FSR
Sbjct: 61  DSRSEVLNIIEGKNVEARDCFSSGCYPSCYSGSPPGRTENPLVHDMYFLHQMEIRSSFSR 120

Query: 168 TNLSDKFSLTSASPT 183
           TNLSDKF+LTSASPT
Sbjct: 121 TNLSDKFNLTSASPT 135

[Close]

BLAST of Bhi03G000603 vs. ExPASy TrEMBL
Match: A0A6J1BUP6 (uncharacterized protein LOC111005918 OS=Momordica charantia OX=3673 GN=LOC111005918 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-50
Identity = 101/133 (75.94%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 50  HIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSGDT 109
           HIATKSNLVDS  +T+     + N LPLCPKPRR  P IP+FL PL CA  +HSQSSG+ 
Sbjct: 5   HIATKSNLVDSSPETN----NNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHSQSSGEG 64

Query: 110 RSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSRTN 169
           R+GILNIIAGK+VEGRDCLCS CYPSCYSGSPP RTENPLVHDVYFLHQME+ SPFS T 
Sbjct: 65  RNGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTK 124

Query: 170 LSDKFSLTSASPT 183
           LS+KFSLTSASPT
Sbjct: 125 LSEKFSLTSASPT 133

[Close]

BLAST of Bhi03G000603 vs. ExPASy TrEMBL
Match: A0A2C9WEC2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G109600 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 9.8e-42
Identity = 87/134 (64.93%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 48  MYHIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSG 107
           MYH+  KSNLVDS   T +LGF+ NN  PLCPKPRRL P IP FL    C    HSQ   
Sbjct: 1   MYHLPVKSNLVDSSSDTTKLGFRGNNQ-PLCPKPRRLGPTIPEFLK---CTK--HSQPIS 60

Query: 108 DTRSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSR 167
           D R+GILN+I  K ++GR+ +CSGC PSCYSGSPPGRT+NPLVHDV+F+HQME+ SPF+R
Sbjct: 61  DGRTGILNLITDKGIDGRESICSGCSPSCYSGSPPGRTDNPLVHDVHFIHQMELLSPFTR 120

Query: 168 TNLSDKFSLTSASP 182
           T LSDKF  TSASP
Sbjct: 121 TKLSDKFGFTSASP 128

[Close]

BLAST of Bhi03G000603 vs. ExPASy TrEMBL
Match: A0A5N5MNV8 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_007658 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 6.3e-41
Identity = 83/139 (59.71%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 43  RNKKEMYHIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVH 102
           +++++MY +  KSNLVDSG  T + GF DNN  PLCPKPRRL P +P+FL PL C+   H
Sbjct: 831 QSQEKMYRLPVKSNLVDSGSDTTKNGFADNNQ-PLCPKPRRLGPAVPAFLKPLRCSK--H 890

Query: 103 SQSSGDTRSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIH 162
            Q S D RSGIL+++A K ++G + +C+GC PSCYSGSPP RT+NPLVHDV F+HQME+ 
Sbjct: 891 CQPSTDERSGILSLVADKAIDGGETICTGCSPSCYSGSPPVRTDNPLVHDVQFIHQMELL 950

Query: 163 SPFSRTNLSDKFSLTSASP 182
           SPF+RT L+DKF  TS SP
Sbjct: 951 SPFTRTKLTDKFGFTSTSP 966

The following BLAST results are available for this feature:

BLAST of Bhi03G000603 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000603 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000603 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881848.1	3.6e-99	100.00	uncharacterized protein LOC120073212 [Benincasa hispida]	[more]
XP_031743884.1	1.9e-63	87.41	uncharacterized protein LOC116404717 [Cucumis sativus] >KGN48953.1 hypothetical ...	[more]
KAA0025640.1	6.7e-61	83.70	hypothetical protein E6C27_scaffold253G001330 [Cucumis melo var. makuwa] >TYK125...	[more]
XP_022133306.1	2.4e-50	75.94	uncharacterized protein LOC111005918 [Momordica charantia]	[more]
KAG6594753.1	2.3e-45	74.80	hypothetical protein SDJN03_11306, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Bhi03G000603 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHD1	9.1e-64	87.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507270 PE=4 SV=1	[more]
A0A5D3CKV6	3.2e-61	83.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1BUP6	1.1e-50	75.94	uncharacterized protein LOC111005918 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A2C9WEC2	9.8e-42	64.93	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G109600 PE=4 SV=...	[more]
A0A5N5MNV8	6.3e-41	59.71	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_007658 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384:SF17	BNAC07G32200D PROTEIN	coord: 48..180
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 48..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000603	Bhi03M000603	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0016020	membrane