Bhi03G000574 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000574
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial
Location	chr3: 14391364 .. 14392483 (+)
RNA-Seq Expression	Bhi03G000574
Synteny	Bhi03G000574

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCCAGGAATTCTTTTAGAGGGACAGTATTCTAACCTAAGACAAACGCGGGGGGCGGTGGGTGGGTGGGGCGAGGTGCCTCCTTCCTTCTCCACTCTTCCCTTCCTCCCTTGCCTATAAAACATGCACTTTATTGAGGGAGGATAAAAAGGAAAAACTTAAATGCTTCTAGTCTTAGTTATAAGGGGGAGATATGCGATCTTAAATAAGTTATAGGAGAGAAGAGGTAGGGGTGGAAATTGAAATAAGTGGATTACAATTCACTTGGTTGATACATCCTTTCAAATAAAAATTATCTTTTGAATTATTTCATATTTGAAAGTAGATATTTGATTATGATTGGATATTAATTTTGCACAGGTGACACCCAATCTTTATGGAAATCTCGTAGCAAACACAGCTGCTGGTATTGCAGGTGGAACAGGAGTTATGCCGGGAGGTTATGCTCAAATGTTTCAGATTCAAAGAATACGTTTTAACATTTAAATTAAGGCAGTGACAGCATATAGTATCTTTTAAGTACTTAAGTAACAAATTTCTTGGAGCCGGATTTGCCTTTAACATCTTGTATGTCAACAAATTTAAGATGGATGGAAGGCAAAATTGTTTTTATTTCCTTGACGCTTAACTGGGAATATTATACATCAATATTAGACAGTAATGAAGTGTAAGAACCGGATGCCTTGAAAATTAACTTTAATCTGGTGGTAGCATGTGAAGTATGCCATGGCTGTAAGCAATCAGTGCTCAATATATAAATCAAACTATTGAAATTCCTTTTCCCTGAGCTTGGAGTTGCTTTGTTCTTGTTCGTATGTGGTCTAACTGGAGTTTCGTTTATTCAGGCAATGTGGTGCTGATCATGCTGTTTTTGAGCAGGAGCTTCAGCAGGAAATGTGGGAATGAAAGGCTAGGTGGAACAAAAGAAGGCAAACCCTGTGGCGCTGCTCTTATCATCTGCCATGATGCTAGACATCTCCAGTTCCCTTCTTTTGCCGATCGATTAGAAACAGCGGTTAAGAAGGTGATATTCGAAGGCAAGTACCGGACCAAGGACCTTGGTGGACAGAGCACGACGCAGGAGGTTGTTGATGCAGTTATAGCTGCTTTAGATTGA

mRNA sequence

ATGGTGCCAGGAATTCTTTTAGAGGGACAGTATTCTAACCTAAGACAAACGCGGGGGGCGGTGGGTGGGTGGGGCGAGGTGACACCCAATCTTTATGGAAATCTCGTAGCAAACACAGCTGCTGGTATTGCAGGTGGAACAGGAGTTATGCCGGGAGGCAATGTGGTGCTGATCATGCTGTTTTTGAGCAGGAGCTTCAGCAGGAAATGTGGGAATGAAAGGCTAGGTGGAACAAAAGAAGGCAAACCCTGTGGCGCTGCTCTTATCATCTGCCATGATGCTAGACATCTCCAGTTCCCTTCTTTTGCCGATCGATTAGAAACAGCGGTTAAGAAGGTGATATTCGAAGGCAAGTACCGGACCAAGGACCTTGGTGGACAGAGCACGACGCAGGAGGTTGTTGATGCAGTTATAGCTGCTTTAGATTGA

Coding sequence (CDS)

ATGGTGCCAGGAATTCTTTTAGAGGGACAGTATTCTAACCTAAGACAAACGCGGGGGGCGGTGGGTGGGTGGGGCGAGGTGACACCCAATCTTTATGGAAATCTCGTAGCAAACACAGCTGCTGGTATTGCAGGTGGAACAGGAGTTATGCCGGGAGGCAATGTGGTGCTGATCATGCTGTTTTTGAGCAGGAGCTTCAGCAGGAAATGTGGGAATGAAAGGCTAGGTGGAACAAAAGAAGGCAAACCCTGTGGCGCTGCTCTTATCATCTGCCATGATGCTAGACATCTCCAGTTCCCTTCTTTTGCCGATCGATTAGAAACAGCGGTTAAGAAGGTGATATTCGAAGGCAAGTACCGGACCAAGGACCTTGGTGGACAGAGCACGACGCAGGAGGTTGTTGATGCAGTTATAGCTGCTTTAGATTGA

Protein sequence

MVPGILLEGQYSNLRQTRGAVGGWGEVTPNLYGNLVANTAAGIAGGTGVMPGGNVVLIMLFLSRSFSRKCGNERLGGTKEGKPCGAALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD

Homology

[Close]

BLAST of Bhi03G000574 vs. TAIR 10
Match: AT4G35650.1 (isocitrate dehydrogenase III )

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-34
Identity = 75/117 (64.10%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNL+ANTAAGIAGGTGVMPGGNV     +F   + +   GN+++   K+  P  
Sbjct: 252 VTPNLYGNLIANTAAGIAGGTGVMPGGNVGAEHAIFEQGASAGNVGNDKMVEQKKANPVA 311

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHL+FP+FADRLETAVK+VI EGKYRTKDLGG  TTQEVVDAVIAAL+
Sbjct: 312 LLLSSAMMLRHLRFPTFADRLETAVKQVIKEGKYRTKDLGGDCTTQEVVDAVIAALE 368

[Close]

BLAST of Bhi03G000574 vs. TAIR 10
Match: AT4G35260.1 (isocitrate dehydrogenase 1 )

HSP 1 Score: 138.7 bits (348), Expect = 3.7e-33
Identity = 77/117 (65.81%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   G +++    +  P  
Sbjct: 251 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKIVLENKANPVA 310

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVI EGK RTKDLGG STTQEVVDAVIA LD
Sbjct: 311 LLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKCRTKDLGGTSTTQEVVDAVIAKLD 367

[Close]

BLAST of Bhi03G000574 vs. TAIR 10
Match: AT2G17130.1 (isocitrate dehydrogenase subunit 2 )

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-32
Identity = 75/117 (64.10%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   G +     K   P  
Sbjct: 251 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEYAVFEQGASAGNVGKDTTEEQKNANPVA 310

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVK+VI EG  RT+DLGG STTQEVVDAVIA LD
Sbjct: 311 LLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANLD 367

[Close]

BLAST of Bhi03G000574 vs. TAIR 10
Match: AT2G17130.2 (isocitrate dehydrogenase subunit 2 )

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-32
Identity = 75/117 (64.10%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   G +     K   P  
Sbjct: 247 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEYAVFEQGASAGNVGKDTTEEQKNANPVA 306

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVK+VI EG  RT+DLGG STTQEVVDAVIA LD
Sbjct: 307 LLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANLD 363

[Close]

BLAST of Bhi03G000574 vs. TAIR 10
Match: AT5G03290.1 (isocitrate dehydrogenase V )

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 39/111 (35.14%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNVVLIMLFLSRSFSRKCGNERLGGTKEGKPCGA 86
           V PNLYG+++++  AG+ GG G+ P  N+    + L+ +      +  + G     P   
Sbjct: 262 VMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAVHGSAPD--IAGKNLANPTAL 321

Query: 87  ALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAV 138
            L      RHL+F   A+++ +A+   I EGKYRT DLGG STT E   A+
Sbjct: 322 LLSGVMMLRHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAI 370

[Close]

BLAST of Bhi03G000574 vs. ExPASy Swiss-Prot
Match: O81796 (Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=IDH3 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.2e-33
Identity = 75/117 (64.10%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNL+ANTAAGIAGGTGVMPGGNV     +F   + +   GN+++   K+  P  
Sbjct: 252 VTPNLYGNLIANTAAGIAGGTGVMPGGNVGAEHAIFEQGASAGNVGNDKMVEQKKANPVA 311

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHL+FP+FADRLETAVK+VI EGKYRTKDLGG  TTQEVVDAVIAAL+
Sbjct: 312 LLLSSAMMLRHLRFPTFADRLETAVKQVIKEGKYRTKDLGGDCTTQEVVDAVIAALE 368

[Close]

BLAST of Bhi03G000574 vs. ExPASy Swiss-Prot
Match: Q8LFC0 (Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=IDH1 PE=1 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 5.3e-32
Identity = 77/117 (65.81%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   G +++    +  P  
Sbjct: 251 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKIVLENKANPVA 310

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVI EGK RTKDLGG STTQEVVDAVIA LD
Sbjct: 311 LLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKCRTKDLGGTSTTQEVVDAVIAKLD 367

[Close]

BLAST of Bhi03G000574 vs. ExPASy Swiss-Prot
Match: P93032 (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=IDH2 PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 4.5e-31
Identity = 75/117 (64.10%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   G +     K   P  
Sbjct: 251 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEYAVFEQGASAGNVGKDTTEEQKNANPVA 310

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVK+VI EG  RT+DLGG STTQEVVDAVIA LD
Sbjct: 311 LLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANLD 367

[Close]

BLAST of Bhi03G000574 vs. ExPASy Swiss-Prot
Match: Q93353 (Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Caenorhabditis elegans OX=6239 GN=idhb-1 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13
Identity = 45/112 (40.18%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNVVLIMLFLSRSFSRKCGNERLGGTKEGKPCGA 86
           V PNLYGN++ N AAG+ GG GV+PG +V    +      SR    E + G     P   
Sbjct: 265 VMPNLYGNIIDNLAAGLVGGAGVVPGQSVGRDFVIFEPG-SRHSFQEAM-GRSIANPTAM 324

Query: 87  ALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVI 139
            L   +   HL   ++ + L  AV  V+ EGK RT+DLGG +TT +  DAVI
Sbjct: 325 ILCAANMLNHLHLDAWGNSLRQAVADVVKEGKVRTRDLGGYATTVDFADAVI 374

[Close]

BLAST of Bhi03G000574 vs. ExPASy Swiss-Prot
Match: O13696 (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=idh1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.1e-12
Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNVVLIMLFLSRSFSRKCGNERLG--GTKEGKPC 86
           V PNLYG++++N  + + GG GV+PG N           F   C +  L   G  E  P 
Sbjct: 241 VMPNLYGSILSNIGSALVGGPGVIPGANFGRDYAL----FEPGCRHVGLSITGRGEANPT 300

Query: 87  GAALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
            A L  C   RHL    +AD +  A   VI EGK  TKDLGG ++T +   A++  ++
Sbjct: 301 AAILSACLMLRHLGLKDYADLINAATYSVIEEGKTLTKDLGGSASTGDFTHAILERME 354

[Close]

BLAST of Bhi03G000574 vs. NCBI nr
Match: XP_038882234.1 (isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MVPGILLEGQYSNLRQTRGAVGGWGEVTPNLYGNLVANTAAGIAGGTGVMPGGNVVLIML 60
           MVPGILLEGQYSNLRQTRGAVGGWGEVTPNLYGNLVANTAAGIAGGTGVMPGGNVVLIML
Sbjct: 1   MVPGILLEGQYSNLRQTRGAVGGWGEVTPNLYGNLVANTAAGIAGGTGVMPGGNVVLIML 60

Query: 61  FLSRSFSRKCGNERLGGTKEGKPCGAALIICHDARHLQFPSFADRLETAVKKVIFEGKYR 120
           FLSRSFSRKCGNERLGGTKEGKPCGAALIICHDARHLQFPSFADRLETAVKKVIFEGKYR
Sbjct: 61  FLSRSFSRKCGNERLGGTKEGKPCGAALIICHDARHLQFPSFADRLETAVKKVIFEGKYR 120

Query: 121 TKDLGGQSTTQEVVDAVIAALD 143
           TKDLGGQSTTQEVVDAVIAALD
Sbjct: 121 TKDLGGQSTTQEVVDAVIAALD 142

[Close]

BLAST of Bhi03G000574 vs. NCBI nr
Match: XP_038882494.1 (isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 157.5 bits (397), Expect = 8.4e-35
Identity = 86/117 (73.50%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   GNERL   K+  P  
Sbjct: 265 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVA 324

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD
Sbjct: 325 LLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 381

[Close]

BLAST of Bhi03G000574 vs. NCBI nr
Match: XP_022133109.1 (isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial [Momordica charantia])

HSP 1 Score: 157.5 bits (397), Expect = 8.4e-35
Identity = 86/117 (73.50%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   GNERL   K+  P  
Sbjct: 265 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVA 324

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD
Sbjct: 325 LLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 381

[Close]

BLAST of Bhi03G000574 vs. NCBI nr
Match: KAA0025614.1 (isocitrate dehydrogenase [Cucumis melo var. makuwa] >TYK12489.1 isocitrate dehydrogenase [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-34
Identity = 85/117 (72.65%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   GNERL   K+  P  
Sbjct: 304 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVA 363

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIA+LD
Sbjct: 364 LLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIASLD 420

[Close]

BLAST of Bhi03G000574 vs. NCBI nr
Match: XP_008440904.1 (PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial [Cucumis melo])

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-34
Identity = 85/117 (72.65%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   GNERL   K+  P  
Sbjct: 265 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVA 324

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIA+LD
Sbjct: 325 LLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIASLD 381

[Close]

BLAST of Bhi03G000574 vs. ExPASy TrEMBL
Match: A0A6J1BV15 (isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005786 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.0e-35
Identity = 86/117 (73.50%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   GNERL   K+  P  
Sbjct: 265 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVA 324

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD
Sbjct: 325 LLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 381

[Close]

BLAST of Bhi03G000574 vs. ExPASy TrEMBL
Match: A0A5A7SJ01 (Isocitrate dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00670 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.0e-35
Identity = 85/117 (72.65%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   GNERL   K+  P  
Sbjct: 304 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVA 363

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIA+LD
Sbjct: 364 LLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIASLD 420

[Close]

BLAST of Bhi03G000574 vs. ExPASy TrEMBL
Match: A0A1S3B2U5 (isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103485186 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.0e-35
Identity = 85/117 (72.65%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   GNERL   K+  P  
Sbjct: 265 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVA 324

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIA+LD
Sbjct: 325 LLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIASLD 381

[Close]

BLAST of Bhi03G000574 vs. ExPASy TrEMBL
Match: A0A0A0KMQ6 (Iso_dh domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509550 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 84/117 (71.79%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   GNERL   K+  P  
Sbjct: 265 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVA 324

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEV+DAVIA+LD
Sbjct: 325 LLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVIDAVIASLD 381

[Close]

BLAST of Bhi03G000574 vs. ExPASy TrEMBL
Match: A0A6J1KXY7 (isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497352 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.5e-34
Identity = 84/117 (71.79%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 27  VTPNLYGNLVANTAAGIAGGTGVMPGGNV-VLIMLFLSRSFSRKCGNERLGGTKEGKPCG 86
           VTPNLYGNLVANTAAGIAGGTGVMPGGNV     +F   + +   GN+R+   K+  P  
Sbjct: 265 VTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNDRIVEQKKANPVA 324

Query: 87  AALIICHDARHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 143
             L      RHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD
Sbjct: 325 LLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVVDAVIAALD 381

The following BLAST results are available for this feature:

BLAST of Bhi03G000574 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35650.1	4.4e-34	64.10	isocitrate dehydrogenase III	[more]
AT4G35260.1	3.7e-33	65.81	isocitrate dehydrogenase 1	[more]
AT2G17130.1	3.2e-32	64.10	isocitrate dehydrogenase subunit 2	[more]
AT2G17130.2	3.2e-32	64.10	isocitrate dehydrogenase subunit 2	[more]
AT5G03290.1	1.3e-12	35.14	isocitrate dehydrogenase V	[more]

BLAST of Bhi03G000574 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81796	6.2e-33	64.10	Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsi...	[more]
Q8LFC0	5.3e-32	65.81	Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsi...	[more]
P93032	4.5e-31	64.10	Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsi...	[more]
Q93353	1.1e-13	40.18	Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Caenorhab...	[more]
O13696	6.1e-12	35.59	Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Schizosaccharomyces p...	[more]

BLAST of Bhi03G000574 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882234.1	1.1e-74	100.00	isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial-like [Beninca...	[more]
XP_038882494.1	8.4e-35	73.50	isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial [Benincasa hi...	[more]
XP_022133109.1	8.4e-35	73.50	isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial [Momordica ch...	[more]
KAA0025614.1	1.9e-34	72.65	isocitrate dehydrogenase [Cucumis melo var. makuwa] >TYK12489.1 isocitrate dehyd...	[more]
XP_008440904.1	1.9e-34	72.65	PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial [C...	[more]

BLAST of Bhi03G000574 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BV15	4.0e-35	73.50	isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Momordica ...	[more]
A0A5A7SJ01	9.0e-35	72.65	Isocitrate dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B2U5	9.0e-35	72.65	isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Cucumis me...	[more]
A0A0A0KMQ6	1.2e-34	71.79	Iso_dh domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509550 PE=3...	[more]
A0A6J1KXY7	1.5e-34	71.79	isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial isoform X1 OS...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.718.10	Isopropylmalate Dehydrogenase	coord: 25..142 e-value: 1.1E-19 score: 72.6
None	No IPR available	PANTHER	PTHR11835	DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE	coord: 27..140
None	No IPR available	PANTHER	PTHR11835:SF62	ISOCITRATE DEHYDROGENASE [NAD] REGULATORY SUBUNIT 1, MITOCHONDRIAL-LIKE	coord: 27..140
None	No IPR available	SUPERFAMILY	53659	Isocitrate/Isopropylmalate dehydrogenase-like	coord: 27..141
IPR024084	Isopropylmalate dehydrogenase-like domain	PFAM	PF00180	Iso_dh	coord: 27..137 e-value: 5.2E-9 score: 35.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000574	Bhi03M000574	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006102	isocitrate metabolic process
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004449	isocitrate dehydrogenase (NAD+) activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor