Bhi03G000524 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000524
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr3: 13129689 .. 13131015 (-)
RNA-Seq Expression	Bhi03G000524
Synteny	Bhi03G000524

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACGGGGATAAAGGGAAGCAGTGCGCGCGGAGGGCGAGAACGGGGAAGAGCAGGGGGGAAAGGAGGAGGTACGGAGGGGGAGGAGGATGGTGGAGGAGGTGGAGGAGAGGAGAGGGCGGAACCGCGGTGAGTCAGGGACGACGAGGGAGGGGAAAAGGGACGGAAAGCAGGGGAGGACTAGCAGATAAAAGGATGAGGGACGCGCTCGAAGACGACGAGGGGACCGGAAACCAAGAGGGGCCGACGACAGGAGCGGAAGCCGAACGCGGGGGCGACGAGGGGACCGAAAAGGGACGAGGGGCGACGAGAGGCACGGAGTCGCGGACGGGTGCCCGCACGAGGGTGGCGGAGCTCGCTCGGAGCTACCAGAGATAGGGGAGCGGGGGGTAAAAGCGCGGAGTAGAGGGCCAGCCAGAAAGGGAGAGAAGGAGAGGCAGGGCGCACTACGGAGGGGGGATGGGGAGAAAAGGGGCACAGCGCGCACCAGAGGACCCGCCGAACCGGGACGGGAAAGAGTGACGGCAGGAGACCAACCCGGGGGCGGGCACGGACGGCCGAGGGGGACCGGGGAACGACGCAACCCGGCAAGACAAGACAGAGTTAACGCAGGTACGGAAGACGGGGGACACGGACAGGGGGCCGGACCAGGGAGGAGACAGGGAGAGGACCACCTTAAGGAATGCCCCAGCAAGAAGACGAGGGCACTAGACAGACACAGGGTGACGAGCGGAAGACAGGGCGGCAAGGAGGCGGCCCGCAACCGGGGCGGGAGGGGCAGAAAAGAGAGAGCAGAAAAAGGCGGGGAACGGAGCGCGACCGGGAAAAAAAAAACAGGGGAAAGCGTGGAGCGAGAAAGCCCAGTTGGAGGGACGGAAGAAAACGGAAAACTCAGGCGGAAACGGGAAAGGCGGGAAAACAGTAAGACGGGAACGGAAAAACGACACCAAGAAAACGGGGAGAGAAAACCGTGGAAACCAGTGGATCGGCAACCGGAAGCGGAGGGGAGAAGGAACAGGGCACACGCGAAGTCCCAACGGCAAGCCAGGGCCAGGGCAGACCGTCGACGGCAACCGGGGGCCACAGGGAAACGTAGTGGCGAGAAGAGGGCCCGGACGGCGAGCGCGGGAAAGAGACGAGGACAGCGCAACAACAGGCCGGAAGACATAAACGGGGAGAACAACTGGGAGACAGCAAGAAGCAGCAGGACACGCGGGGGGGGCGGACAGGGTGACGGGCACAACCAGGAGGTGCAAGAGGGGCAGAGGAGGGGGCAGGGGGAGGGTGGAAGAGAGGGGGAAAAAAACGCCACGGGGGAAGAATAG

mRNA sequence

ATGGGGACGGGGATAAAGGGAAGCAGTGCGCGCGGAGGGCGAGAACGGGGAAGAGCAGGGGGGAAAGGAGGAGGTACGGAGGGGGAGGAGGATGGTGGAGGAGGTGGAGGAGAGGAGAGGGCGGAACCGCGACGACGAGGGGACCGGAAACCAAGAGGGGCCGACGACAGGAGCGGAAGCCGAACGCGGGGGCGACGAGGGGACCGAAAAGGGACGAGGGGCGACGAGAGGCACGGAGTCGCGGACGGGTGCCCGCACGAGGGTGGCGGAGCTCGCTCGGAGCTACCAGAGATAGGGGAGCGGGGGGTAAAAGCGCGGAGTAGAGGGCCAGCCAGAAAGGGAGAGAAGGAGAGGCAGGGCGCACTACGGAGGGGGGATGGGGAGAAAAGGGGCACAGCGCGCACCAGAGGACCCGCCGAACCGGGACGGGAAAGAGTGACGGCAGGAGACCAACCCGGGGGCGGGCACGGACGGCCGAGGGGGACCGGGGAACGACGCAACCCGGCAAGACAAGACAGAGTTAACGCAGGTACGGAAGACGGGGGACACGGACAGGGGGCCGGACCAGGGAGGAGACAGGGAGAGGACCACCTTAAGGAATGCCCCAGCAAGAAGACGAGGGCACTAGACAGACACAGGGTGACGAGCGGAAGACAGGGCGGCAAGGAGGCGGCCCGCAACCGGGGCGGGAGGGGCAGAAAAGAGAGAGCAGAAAAAGGCGGGGAACGGAGCGCGACCGGGAAAAAAAAAACAGGGGAAAGCGTGGAGCGAGAAAGCCCAGTTGGAGGGACGGAAGAAAACGGAAAACTCAGGCGGAAACGGGAAAGGCGGGAAAACAGTAAGACGGGAACGGAAAAACGACACCAAGAAAACGGGGAGAGAAAACCGTGGAAACCAGTGGATCGGCAACCGGAAGCGGAGGGGAGAAGGAACAGGGCACACGCGAAGTCCCAACGGCAAGCCAGGGCCAGGGCAGACCGTCGACGGCAACCGGGGGCCACAGGGAAACGTAGTGGCGAGAAGAGGGCCCGGACGGCGAGCGCGGGAAAGAGACGAGGACAGCGCAACAACAGGCCGGAAGACATAAACGGGGAGAACAACTGGGAGACAGCAAGAAGCAGCAGGACACGCGGGGGGGGCGGACAGGGTGACGGGCACAACCAGGAGGTGCAAGAGGGGCAGAGGAGGGGGCAGGGGGAGGGTGGAAGAGAGGGGGAAAAAAACGCCACGGGGGAAGAATAG

Coding sequence (CDS)

ATGGGGACGGGGATAAAGGGAAGCAGTGCGCGCGGAGGGCGAGAACGGGGAAGAGCAGGGGGGAAAGGAGGAGGTACGGAGGGGGAGGAGGATGGTGGAGGAGGTGGAGGAGAGGAGAGGGCGGAACCGCGACGACGAGGGGACCGGAAACCAAGAGGGGCCGACGACAGGAGCGGAAGCCGAACGCGGGGGCGACGAGGGGACCGAAAAGGGACGAGGGGCGACGAGAGGCACGGAGTCGCGGACGGGTGCCCGCACGAGGGTGGCGGAGCTCGCTCGGAGCTACCAGAGATAGGGGAGCGGGGGGTAAAAGCGCGGAGTAGAGGGCCAGCCAGAAAGGGAGAGAAGGAGAGGCAGGGCGCACTACGGAGGGGGGATGGGGAGAAAAGGGGCACAGCGCGCACCAGAGGACCCGCCGAACCGGGACGGGAAAGAGTGACGGCAGGAGACCAACCCGGGGGCGGGCACGGACGGCCGAGGGGGACCGGGGAACGACGCAACCCGGCAAGACAAGACAGAGTTAACGCAGGTACGGAAGACGGGGGACACGGACAGGGGGCCGGACCAGGGAGGAGACAGGGAGAGGACCACCTTAAGGAATGCCCCAGCAAGAAGACGAGGGCACTAGACAGACACAGGGTGACGAGCGGAAGACAGGGCGGCAAGGAGGCGGCCCGCAACCGGGGCGGGAGGGGCAGAAAAGAGAGAGCAGAAAAAGGCGGGGAACGGAGCGCGACCGGGAAAAAAAAAACAGGGGAAAGCGTGGAGCGAGAAAGCCCAGTTGGAGGGACGGAAGAAAACGGAAAACTCAGGCGGAAACGGGAAAGGCGGGAAAACAGTAAGACGGGAACGGAAAAACGACACCAAGAAAACGGGGAGAGAAAACCGTGGAAACCAGTGGATCGGCAACCGGAAGCGGAGGGGAGAAGGAACAGGGCACACGCGAAGTCCCAACGGCAAGCCAGGGCCAGGGCAGACCGTCGACGGCAACCGGGGGCCACAGGGAAACGTAGTGGCGAGAAGAGGGCCCGGACGGCGAGCGCGGGAAAGAGACGAGGACAGCGCAACAACAGGCCGGAAGACATAAACGGGGAGAACAACTGGGAGACAGCAAGAAGCAGCAGGACACGCGGGGGGGGCGGACAGGGTGACGGGCACAACCAGGAGGTGCAAGAGGGGCAGAGGAGGGGGCAGGGGGAGGGTGGAAGAGAGGGGGAAAAAAACGCCACGGGGGAAGAATAG

Protein sequence

MGTGIKGSSARGGRERGRAGGKGGGTEGEEDGGGGGGEERAEPRRRGDRKPRGADDRSGSRTRGRRGDRKGTRGDERHGVADGCPHEGGGARSELPEIGERGVKARSRGPARKGEKERQGALRRGDGEKRGTARTRGPAEPGRERVTAGDQPGGGHGRPRGTGERRNPARQDRVNAGTEDGGHGQGAGPGRRQGEDHLKECPSKKTRALDRHRVTSGRQGGKEAARNRGGRGRKERAEKGGERSATGKKKTGESVERESPVGGTEENGKLRRKRERRENSKTGTEKRHQENGERKPWKPVDRQPEAEGRRNRAHAKSQRQARARADRRRQPGATGKRSGEKRARTASAGKRRGQRNNRPEDINGENNWETARSSRTRGGGGQGDGHNQEVQEGQRRGQGEGGREGEKNATGEE

Homology

[Close]

BLAST of Bhi03G000524 vs. NCBI nr
Match: WP_187726429.1 (hypothetical protein, partial [Salmonella enterica])

HSP 1 Score: 56.2 bits (134), Expect = 7.6e-04
Identity = 137/414 (33.09%), Postives = 191/414 (46.14%), Query Frame = 0


Query: 12  GGRERGRAGGKGGGTEGEEDGGGGGGEERAEPRRRGDRKPRGADDRSGSRTRGRRGDRKG 71
           GG ERG+ G K  G + +   GG GG+E+   +R G++K R  ++R   R   R G R+G
Sbjct: 2   GGGERGKRGEKKEGGKRKRGRGGKGGKEK---KREGEKKRR--EERGERRREERGGGRRG 61

Query: 72  TRGDERHGVADGCPHEGGGARSELPEIGERGVKAR--SRGPARKGE--KERQGALRRGDG 131
             G+ R    +G   EG        E   RG + R   RG  RKGE  K++ G  RR  G
Sbjct: 62  GEGERRRRKKEG--GEGERREGRKGERERRGGRKRGGGRGRERKGERRKKKGGRGRREKG 121

Query: 132 EKRGTARTRGPAEPGRERVTAGDQPGGGHGRPRGTGERRNPARQDRVNAGTE--DGGHGQ 191
           E+RG  R R   E G E      + GGG GR     ERR    ++R   G +    G G+
Sbjct: 122 ERRGGERER--KEKGEE------EKGGGKGRRE---ERRREREKERKRKGWKRWGKGGGK 181

Query: 192 GAGPGRRQGEDHLKECPSKKTRALDRHRVTSGR------QGGKEAARNRGGRGRKERAEK 251
           G G GRR+G    KE   K+ R         GR      +GG+   + RGG+G +E   +
Sbjct: 182 GGGRGRRRGGGRKKEGEGKEKRREKEEEKEGGRGRREGGEGGRGERKGRGGKGEREGERE 241

Query: 252 GGERSATGKKKTGESVERESPVGGTEENGKLRRKRERRENSKTGTEKRHQENGERKPWKP 311
           GG     GKKK  E  ERE   GG E   + R +R+ +E  K   EKR  E G     + 
Sbjct: 242 GGGGGGGGKKKKEE--ERERGRGGEERGRREREERKGKERRKKKKEKR--EKGREGKEEK 301

Query: 312 VDRQPEAEGRRNRAHAKSQRQARARADRRRQPGATGKRSGEKRARTASAGKRRGQRNNRP 371
            + + E EG+R     K   + R R   RR+ G   K    +R      G+ +G+R  + 
Sbjct: 302 GEGKKEREGKRGEKGKKRGGERRGRGGERREGGEERKEGKGRREEGGERGRGKGKRKRK- 361

Query: 372 EDINGENNWETARSSRTRGGGGQGDGHNQEVQEGQRRGQGEGGREGEKNATGEE 414
               G+   E  R +R  GGG +G       ++G+ RG+ E GRE E+   GE+
Sbjct: 362 ---KGKKKRERKRRTRGEGGGRRG-------KKGKERGEREEGREKEEKKKGEK 382

The following BLAST results are available for this feature:

BLAST of Bhi03G000524 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000524 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000524 vs. NCBI nr


Match Name	E-value	Identity	Description
WP_187726429.1	7.6e-04	33.09	hypothetical protein, partial [Salmonella enterica]	[more]

BLAST of Bhi03G000524 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..413
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..413
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000524	Bhi03M000524	mRNA