Bhi03G000398 (gene) Wax gourd (B227) v1

Overview
NameBhi03G000398
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr3: 10156665 .. 10157369 (+)
RNA-Seq ExpressionBhi03G000398
SyntenyBhi03G000398
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTAGAAGATTTAATTCGCTTGGGTTCCTCTCTCAACTCTCAAGAGTTCTCTTTCCATTTTTTGGATTTTCGAATGGCGAAGGAGGAAAGAAAACAAGTCTTCAAGAAAGGGTGGGTTACGATTTTGGATGTGCCCTCATTCCTCAGAATGAAGGAATTCATCGCCTCCATGGTAGTGTGGTGTGGAGGGCTACTCGAGGAAGAATTTGATTATGGTAGCTCAAATTGGCTAAAGAAAGTATGCTTTAAAGCGAATGGCAATGACAATGGTTTCATTCTAGTGGGTTGTCTTATTAACCATTCGAAGTTTGCATTTTCGATGAGGTCCATTGTCGCCCGACACTGGGAAGAAGAAGGTCAGAGGCAGCTAGACCATTATTCGGTTAAAGCTGCTCCATTGTCTTTTGGCCTGTCTCATGATCAGAAAGGAAGAAATAAGGGGAGTCGCGTGATTAACTTGGGAAAGAGGGAAAGAGATAGGGCTAAGGAAGCAGTTGGTCAAAGGGCTGGGTTGGATTGCAATATATCCCAAAAGACCATTTCGGACACCCAACCCAATTCCGAGGATAAAAAAAGGGTTTTCTTGGCCAAGGGTATTTTAAAAAATGGGCCCTCTTCAACTATCGAGAATGTTGGGGCCCAAGAAGGGTTTCAAGCCCACAAGATGGCTTCAAAGGCTAATTTTAGTCGAGTAGAGTAG

mRNA sequence

ATGGAGGTAGAAGATTTAATTCGCTTGGGTTCCTCTCTCAACTCTCAAGAGTTCTCTTTCCATTTTTTGGATTTTCGAATGGCGAAGGAGGAAAGAAAACAAGTCTTCAAGAAAGGGTGGGTTACGATTTTGGATGTGCCCTCATTCCTCAGAATGAAGGAATTCATCGCCTCCATGGTAGTGTGGTGTGGAGGGCTACTCGAGGAAGAATTTGATTATGGTAGCTCAAATTGGCTAAAGAAAGTATGCTTTAAAGCGAATGGCAATGACAATGGTTTCATTCTAGTGGGTTGTCTTATTAACCATTCGAAGTTTGCATTTTCGATGAGGTCCATTGTCGCCCGACACTGGGAAGAAGAAGGTCAGAGGCAGCTAGACCATTATTCGGTTAAAGCTGCTCCATTGTCTTTTGGCCTGTCTCATGATCAGAAAGGAAGAAATAAGGGGAGTCGCGTGATTAACTTGGGAAAGAGGGAAAGAGATAGGGCTAAGGAAGCAGTTGGTCAAAGGGCTGGGTTGGATTGCAATATATCCCAAAAGACCATTTCGGACACCCAACCCAATTCCGAGGATAAAAAAAGGGTTTTCTTGGCCAAGGGTATTTTAAAAAATGGGCCCTCTTCAACTATCGAGAATGTTGGGGCCCAAGAAGGGTTTCAAGCCCACAAGATGGCTTCAAAGGCTAATTTTAGTCGAGTAGAGTAG

Coding sequence (CDS)

ATGGAGGTAGAAGATTTAATTCGCTTGGGTTCCTCTCTCAACTCTCAAGAGTTCTCTTTCCATTTTTTGGATTTTCGAATGGCGAAGGAGGAAAGAAAACAAGTCTTCAAGAAAGGGTGGGTTACGATTTTGGATGTGCCCTCATTCCTCAGAATGAAGGAATTCATCGCCTCCATGGTAGTGTGGTGTGGAGGGCTACTCGAGGAAGAATTTGATTATGGTAGCTCAAATTGGCTAAAGAAAGTATGCTTTAAAGCGAATGGCAATGACAATGGTTTCATTCTAGTGGGTTGTCTTATTAACCATTCGAAGTTTGCATTTTCGATGAGGTCCATTGTCGCCCGACACTGGGAAGAAGAAGGTCAGAGGCAGCTAGACCATTATTCGGTTAAAGCTGCTCCATTGTCTTTTGGCCTGTCTCATGATCAGAAAGGAAGAAATAAGGGGAGTCGCGTGATTAACTTGGGAAAGAGGGAAAGAGATAGGGCTAAGGAAGCAGTTGGTCAAAGGGCTGGGTTGGATTGCAATATATCCCAAAAGACCATTTCGGACACCCAACCCAATTCCGAGGATAAAAAAAGGGTTTTCTTGGCCAAGGGTATTTTAAAAAATGGGCCCTCTTCAACTATCGAGAATGTTGGGGCCCAAGAAGGGTTTCAAGCCCACAAGATGGCTTCAAAGGCTAATTTTAGTCGAGTAGAGTAG

Protein sequence

MEVEDLIRLGSSLNSQEFSFHFLDFRMAKEERKQVFKKGWVTILDVPSFLRMKEFIASMVVWCGGLLEEEFDYGSSNWLKKVCFKANGNDNGFILVGCLINHSKFAFSMRSIVARHWEEEGQRQLDHYSVKAAPLSFGLSHDQKGRNKGSRVINLGKRERDRAKEAVGQRAGLDCNISQKTISDTQPNSEDKKRVFLAKGILKNGPSSTIENVGAQEGFQAHKMASKANFSRVE
Homology
[Close]
BLAST of Bhi03G000398 vs. NCBI nr
Match: KAE8648463.1 (hypothetical protein Csa_023678, partial [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-11
Identity = 51/135 (37.78%), Postives = 72/135 (53.33%), Query Frame = 0 

Query: 24  DFRMAKEERKQVFKKGWVTILDVPSFLRMKEFIASMVVWCGGLLEEEFDYGSSNWLKKVC 83
           DFR+ + +RKQ F+ G V  LDVP F   K    S+V WCGG   +   + S   LK+V 
Sbjct: 76  DFRVIEGQRKQEFRGGSVAALDVPPFFENKGDNPSLVSWCGGRAVKMCIHWSPTGLKEVS 135

Query: 84  FKANGNDNGFILVGCLINHSKFAFSMRSIVARHWEEEGQRQLDHYSVKAAPLSFGLSHD- 143
           F+A   ++GFILVGC++NH  F F   S++    E E   + D  SV+   L    +H  
Sbjct: 136 FRAEVKEDGFILVGCIVNHWDFFF--LSVLGSEKEGERTSREDFDSVECDGLVDKKAHRG 195

Query: 144 -QKGRNKGSRVINLG 157
            +KG+ K    + LG
Sbjct: 196 FEKGKVKPIDFVELG 208

[Close]
BLAST of Bhi03G000398 vs. NCBI nr
Match: TYK14183.1 (hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 9.0e-10
Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 59  MVVWCGGLLEEEFDYGSSNWLKKVCFKANGNDNGFILVGCLINHSKFAFSMRSIVARHWE 118
           MVV CGG  EEE  +  SNW+++VCFKA GN++GF+L  C++N+ +F+FS R  +   W 
Sbjct: 230 MVVPCGGPDEEEDPFFKSNWMREVCFKALGNEDGFVLACCIVNYQEFSFSSRFCIG--WS 289

Query: 119 EEGQRQL 126
           +EG+ QL
Sbjct: 290 QEGEVQL 294

[Close]
BLAST of Bhi03G000398 vs. ExPASy TrEMBL
Match: A0A5D3CQQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8046G00070 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.4e-10
Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 59  MVVWCGGLLEEEFDYGSSNWLKKVCFKANGNDNGFILVGCLINHSKFAFSMRSIVARHWE 118
           MVV CGG  EEE  +  SNW+++VCFKA GN++GF+L  C++N+ +F+FS R  +   W 
Sbjct: 230 MVVPCGGPDEEEDPFFKSNWMREVCFKALGNEDGFVLACCIVNYQEFSFSSRFCIG--WS 289

Query: 119 EEGQRQL 126
           +EG+ QL
Sbjct: 290 QEGEVQL 294

The following BLAST results are available for this feature:
BLAST of Bhi03G000398 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G000398 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G000398 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648463.12.8e-1137.78hypothetical protein Csa_023678, partial [Cucumis sativus][more]
TYK14183.19.0e-1049.25hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa][more]
BLAST of Bhi03G000398 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CQQ04.4e-1049.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M000398Bhi03M000398mRNA