Bhi03G000189 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000189
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	LRR receptor-like serine/threonine-protein kinase FLS2
Location	chr3: 4850264 .. 4850503 (+)
RNA-Seq Expression	Bhi03G000189
Synteny	Bhi03G000189

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGCTTAAGTTCACTAGGCGTGTTGAAGTTGTCCAACAACAATTTCTCTAGACGCATTCCTCGAGAAGGTCATCTTTCAACCTTCAATGATCCAACCAGTTATGAAGGTAATCCATATGTTTGAGGAGATCCACTCTCTGTTCTATGCCCAGATACAAATTCCGACAAGCCTTCAATTGAAATCGACAATTTTAATAATGATAGTCATGAAGAAGATAAGTTGGAGAAAATGTGA

mRNA sequence

ATGTCAAGCTTAAGTTCACTAGGCGTGTTGAAGTTGTCCAACAACAATTTCTCTAGACGCATTCCTCGAGAAGGTCATCTTTCAACCTTCAATGATCCAACCAGTTATGAAGATACAAATTCCGACAAGCCTTCAATTGAAATCGACAATTTTAATAATGATAGTCATGAAGAAGATAAGTTGGAGAAAATGTGA

Coding sequence (CDS)

ATGTCAAGCTTAAGTTCACTAGGCGTGTTGAAGTTGTCCAACAACAATTTCTCTAGACGCATTCCTCGAGAAGGTCATCTTTCAACCTTCAATGATCCAACCAGTTATGAAGATACAAATTCCGACAAGCCTTCAATTGAAATCGACAATTTTAATAATGATAGTCATGAAGAAGATAAGTTGGAGAAAATGTGA

Protein sequence

MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYEDTNSDKPSIEIDNFNNDSHEEDKLEKM

Homology

[Close]

BLAST of Bhi03G000189 vs. NCBI nr
Match: XP_038887937.1 (receptor-like protein EIX2 [Benincasa hispida])

HSP 1 Score: 105.9 bits (263), Expect = 1.3e-19
Identity = 60/79 (75.95%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYE---------------DTNSDKPS 60
           M SLSSLGVLKLSNNNFS RIPREGHLSTFNDP+SYE               DTNSDKPS
Sbjct: 813 MLSLSSLGVLKLSNNNFSGRIPREGHLSTFNDPSSYEGNPYLCGDPLSVLCLDTNSDKPS 872

Query: 61  IEIDNFNNDSHEEDKLEKM 65
           IEIDNFN+DSHEEDKLEKM
Sbjct: 873 IEIDNFNSDSHEEDKLEKM 891

[Close]

BLAST of Bhi03G000189 vs. NCBI nr
Match: XP_038881621.1 (receptor-like protein EIX2 [Benincasa hispida])

HSP 1 Score: 104.0 bits (258), Expect = 4.9e-19
Identity = 60/79 (75.95%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYE---------------DTNSDKPS 60
           MSSLSSLGVLKLSNNNFSR I REGHLSTFNDP+SYE               +TNSDKPS
Sbjct: 170 MSSLSSLGVLKLSNNNFSRCILREGHLSTFNDPSSYEGNPYLCGDPLSVVCSNTNSDKPS 229

Query: 61  IEIDNFNNDSHEEDKLEKM 65
           IEIDNFNNDSHEEDKLEKM
Sbjct: 230 IEIDNFNNDSHEEDKLEKM 248

[Close]

BLAST of Bhi03G000189 vs. NCBI nr
Match: XP_038887066.1 (LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Benincasa hispida])

HSP 1 Score: 101.3 bits (251), Expect = 3.2e-18
Identity = 58/79 (73.42%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYE---------------DTNSDKPS 60
           MSSLSSL VLKLSNNNFSR IPREGHLST NDP+SYE               DTNSDKPS
Sbjct: 608 MSSLSSLVVLKLSNNNFSRSIPREGHLSTLNDPSSYEGNPYLCGDTLTIICPDTNSDKPS 667

Query: 61  IEIDNFNNDSHEEDKLEKM 65
           IEIDNFN+DSH+EDKLEKM
Sbjct: 668 IEIDNFNSDSHKEDKLEKM 686

[Close]

BLAST of Bhi03G000189 vs. NCBI nr
Match: XP_038888710.1 (LOW QUALITY PROTEIN: receptor-like protein EIX2 [Benincasa hispida])

HSP 1 Score: 77.0 bits (188), Expect = 6.5e-11
Identity = 47/80 (58.75%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYEDT---------------NSDKPS 60
           M+SL+SLG LKLSNNNFS  IPREGHLSTFND +SYE+                N ++PS
Sbjct: 856 MASLNSLGTLKLSNNNFSGHIPREGHLSTFNDASSYENNPNLCGAPLAVICPNENPNEPS 915

Query: 61  IEIDNF-NNDSHEEDKLEKM 65
           + IDNF +NDSH E KLEKM
Sbjct: 916 VGIDNFYDNDSHGEHKLEKM 935

[Close]

BLAST of Bhi03G000189 vs. NCBI nr
Match: XP_038887063.1 (receptor-like protein EIX2 [Benincasa hispida])

HSP 1 Score: 75.9 bits (185), Expect = 1.4e-10
Identity = 47/80 (58.75%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYEDT---------------NSDKPS 60
           M+SL+SLG LKLSNNNFS  IPREGHLSTFND +SYE+                N  + S
Sbjct: 856 MASLNSLGTLKLSNNNFSGCIPREGHLSTFNDVSSYENNPNLCGAPLAVICPNENPKESS 915

Query: 61  IEIDN-FNNDSHEEDKLEKM 65
           +EIDN ++NDSHEE KLEKM
Sbjct: 916 VEIDNVYDNDSHEEHKLEKM 935

[Close]

BLAST of Bhi03G000189 vs. ExPASy TrEMBL
Match: A0A5A7UKC1 (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00630 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYEDT------------NSDKPSIEI 60
           M++L+SLG L LSNNNFS RIPREGHLSTFN+ +SYE               ++ PS   
Sbjct: 839 MANLNSLGALNLSNNNFSGRIPREGHLSTFNNASSYEGNPYLCGDPLFVTCPNEDPS--- 898

Query: 61  DNFN-NDSHEEDKLEKM 65
           DNF+ ND+HEEDKLEKM
Sbjct: 899 DNFHGNDNHEEDKLEKM 912

[Close]

BLAST of Bhi03G000189 vs. ExPASy TrEMBL
Match: A0A1S3BB21 (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Cucumis melo OX=3656 GN=LOC103487751 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYEDT------------NSDKPSIEI 60
           M++L+SLG L LSNNNFS RIPREGHLSTFN+ +SYE               ++ PS   
Sbjct: 839 MANLNSLGALNLSNNNFSGRIPREGHLSTFNNASSYEGNPYLCGDPLFVTCPNEDPS--- 898

Query: 61  DNFN-NDSHEEDKLEKM 65
           DNF+ ND+HEEDKLEKM
Sbjct: 899 DNFHGNDNHEEDKLEKM 912

[Close]

BLAST of Bhi03G000189 vs. ExPASy TrEMBL
Match: A0A6J1DRZ9 (probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Momordica charantia OX=3673 GN=LOC111022665 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-08
Identity = 46/81 (56.79%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSY---------------EDTNSDKPS 60
           MS L+SLG LKLSNNN S RIPREGHLSTFND +S+                + NS KP 
Sbjct: 845 MSGLNSLGTLKLSNNNLSGRIPREGHLSTFNDASSFAGNTFLCGDPLSVKCPNENSGKPP 904

Query: 61  IEIDNFNN-DSHEE-DKLEKM 65
            EIDNF++  SHEE DK EKM
Sbjct: 905 GEIDNFDDYGSHEEGDKYEKM 925

[Close]

BLAST of Bhi03G000189 vs. ExPASy TrEMBL
Match: A0A5D3CXT5 (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G001000 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-07
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYE---------------DTNSDKPS 60
           MSSL+SLG L LSNNNFS  IPREGH STFND +SYE               + N+ + +
Sbjct: 712 MSSLNSLGALNLSNNNFSGPIPREGHFSTFNDASSYEGNPYLCGEPLSIICPNENAGEGA 771

Query: 61  IEIDN--FNNDSHEEDKLEKM 65
           IE+++   +ND +EEDK++KM
Sbjct: 772 IEMNDNVHDNDGYEEDKMDKM 792

[Close]

BLAST of Bhi03G000189 vs. ExPASy TrEMBL
Match: A0A1S3B5Q6 (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Cucumis melo OX=3656 GN=LOC103486101 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-07
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 1   MSSLSSLGVLKLSNNNFSRRIPREGHLSTFNDPTSYE---------------DTNSDKPS 60
           MSSL+SLG L LSNNNFS  IPREGH STFND +SYE               + N+ + +
Sbjct: 786 MSSLNSLGALNLSNNNFSGPIPREGHFSTFNDASSYEGNPYLCGEPLSIICPNENAGEGA 845

Query: 61  IEIDN--FNNDSHEEDKLEKM 65
           IE+++   +ND +EEDK++KM
Sbjct: 846 IEMNDNVHDNDGYEEDKMDKM 866

The following BLAST results are available for this feature:

BLAST of Bhi03G000189 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000189 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000189 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887937.1	1.3e-19	75.95	receptor-like protein EIX2 [Benincasa hispida]	[more]
XP_038881621.1	4.9e-19	75.95	receptor-like protein EIX2 [Benincasa hispida]	[more]
XP_038887066.1	3.2e-18	73.42	LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase A...	[more]
XP_038888710.1	6.5e-11	58.75	LOW QUALITY PROTEIN: receptor-like protein EIX2 [Benincasa hispida]	[more]
XP_038887063.1	1.4e-10	58.75	receptor-like protein EIX2 [Benincasa hispida]	[more]

BLAST of Bhi03G000189 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKC1	1.5e-08	57.14	LRR receptor-like serine/threonine-protein kinase FLS2 OS=Cucumis melo var. maku...	[more]
A0A1S3BB21	1.5e-08	57.14	LRR receptor-like serine/threonine-protein kinase FLS2 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1DRZ9	3.2e-08	56.79	probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Momordica...	[more]
A0A5D3CXT5	3.6e-07	49.38	LRR receptor-like serine/threonine-protein kinase FLS2 OS=Cucumis melo var. maku...	[more]
A0A1S3B5Q6	3.6e-07	49.38	LRR receptor-like serine/threonine-protein kinase FLS2 OS=Cucumis melo OX=3656 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..56 e-value: 9.0E-7 score: 29.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000189	Bhi03M000189	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity