Bhi03G000060 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000060
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	high mobility group B protein 14
Location	chr3: 1539122 .. 1542590 (-)
RNA-Seq Expression	Bhi03G000060
Synteny	Bhi03G000060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAATATTATGGAAAAAGGGGAAAAAAAACAAAAAACAGTCTAATTATGTCCGTCGTGAAACAAACAAAAGGGCACTCCTAGCCGGTCCAAACTCGCACTCGGCAAGAGCGAGTCCGGGCCGAGCTTTGCCAATTGAAGACTAAGGGAGAGCACAACGGCGCAGAACAATGGCGAAAGCGAAAAAGCCCCAAAAATCACCTTCAGCTTCTGCGCATGATTCTTCCGAAGCTTTTGAAGAAGCGTCTCCAGAGTAAATACTATTCCTCTGATACGTCTCTTGTTTAAATTCAGTCATCATTTTTCGAGCTATGCTTCTGAAGTTTCCATTGGTTTACAAGAACCAGAAAAGACCGTGAAACAAAGTAATTACGCATAACGAGTACATGGAACTTCTTATCTAAAGCTGTATAGCTACTTTAGTTCTTTTCAAGTGCTTCGTTTCTGTCTTAAAGTTATAGTGACTTGAACTCTGAGTTGCTGCTTTTCAACTATCCCTTCCAATTTTAGGTAAAAATATTAATGGGGAAGTGTGGGTTGTGTCCAAACATTAAAATAGTAGTTGTCCGCAAGATTCAAGCGAGTGATGGACTGAAAGCACCATAGGAGCCCATAACATTAGTTTTAAGTCTCTGTTAGAAACACTTTAAACTTGATTGTGCTAATTAATTCTTTTTGAGAGAATGCTTCTGTGATCGGGATTGGAGAGAGTGCTCTTGCAGATTTCTTTGTGGTGTGCCATGATTTTTTTTTTTTCCAGTTTTAGAATTCTCTAGGTAAATTCATGCGCTTCCTAGTTCCATCATTTTATTTTAATCTGTCAATTATTTTCTAATCATTCTTCCTGTTGTGGAGGTTCTTTTCCTAGCAGTTAGGTTGAATTTCGTGTTTTCCCAACAGGAAGCAGTTAATGAATTTCTACCCATTTGGGCTTTTGTAGTTTATTCTGTTAATGCAAATGTATATTTAAAATGATTGCCAAGGATCCATAATTCCCCCTGCTCATTACAAATTTTGTGGAAACATTCAGGGACACGGGATTATGTGTAAAAAGAAGCGAAGAGATGAAAAGGGCAGCAAAAGCTAGCAGATTTAACACGGATAATAAGAGAACGAAGACAATTAAGAAGCCAAAATCAAAGCAGAAGAAAAAAAATGATAAATTTGACGTCAATAAGCCAAAGAAACCACCTACTGCTTTCTTTTACTTTCTGTACGATCCCTTCTCTTACTGTCATCTCATTTATGAATTTATTTTGTTTAGCACTTGAAGTGTGTAAGTGGTAGGCATTTTCATGGTTCTAATGCGCACATATTAAAAGACGTAGGAAGTTTCATGGTTCCTATGCACACATATTAACGTGGGGATGTAAAACATCATGAAAATCTTGGTTTGGTTGTTGATTGTTTGGTTTGTAAGTGGCTTCAATATGAAGTACTTGCAATCTGCAAACGTAACGCCCATCTGCTTATATATAATGCATCTCGTTCATCTTTTTGTTATTCTGACCATCATGATTGTCATCTTAAATATGTTTGCCAAATGCTTCTTTAAAAAAAAAAAAAAGAAGCGGTGTTTCTTTAACTTTAAACTGAATGGGGTTAAGTGGTACGTGCGTTAAATGCTGTTGATTTTGATGTAGCCTGTATTTTTCATGCCTCATATGTATATATTAGTTTAGACATGGTTTGATATTGCAACTACATCGAAAGCTTTTGAGATCTTTAAAGATATCCTGCTCAAGTATACACCTACGAAATGATACTTACATGCTTTGGTGAACTCATGCTGATTTGGAACTCGTAATTTTGAGAATCTAATTGAAATGTTGGTAGTATCTTGAGTGGAAGAACAGATAAAGAACTGCGTCAGCAACTGCTGTAAGTTTCAATGATAGGTATATGAAGTAGCATATTGAGCTAAAGTTTCATTCTTTTTAGAGTTGATAGCAGACATCTTTAGCAGACTCTTGATTTCTAAATCTTGCAAGGTTGATTTTCACTTTTACGTTCATATTCAGCATGGGATAGCTAGGGAAACTTTCCATTAGTCTTCTTAGCACGCATGTTTTAATACTATATTTGATGAAACCTGGCACCATTTAGGACTTATAGCTTACAGAACTAAATTGTATTATCATTCTCAAGGGATGACTTCCGCAAGGAATTTCAAGAACAGAATCCAGATGTCAAGACAATGCGTGATGTAAGTTTGGGAAAGTTCAATGCTAGTCCCTCAGGATTTGTGGGGTTTCCTCCCATCTGTTTATCCTTTCACACTTAGTCAATTGTTACCTTGATGCTTTTTTGTGATTCCATACATCAGGTTGGCAAGGCTTGTGGGGAGAAATGGAAAACAATGACGTATGAGGTTCATGTTCTATCAATGCTTAACTTTGTCTCAAATTTAGTGATTGATAGAATACTTCAATTTGGTTTCCTACCCAAAACTTAGATCTTTATGAATCTTAGCAATTTGCTTTGTATTGAACTACCTTCAAGCTTTCTTCAGATGACAATGACATATGCATAAGTATGGGGTTTTTACATTGTTATTGTTGCTTGGGGGGTATTGAAAAGTCGCAAGGATAACGCAGCTGATTATTGTTTCTCTGTCAAAAGAAAAAAAAATATATATCATGCAGCTGGATAACACTTCATCAAAATTAGACGCTATGATGGTATATCTGTTAACATATTAATTACAATACTAAATGTATGCTACGTTCAATCTGGCTTTGTCTTTTAGGTTATTAGTTCTAATTAAGACTTGAAATCTTCATTATGGAAGTCGATGGCATCGTAGAAGTTAAGTTAATTTTTTTTCCCTCCAAAAGAGAGCAATATCTTAAACGTTCCATGTATTTGGTTGGTTTCTTATACCAGGAAAAAGTACAATATTATGATATTGCCACACAGAAACGTGCAGAGTTTGATAAAGCCATGGCAGAATACAAGAAGAGGAAGGTAAGCTCTGTCTTGGTTTGCTAATTTTCTCATTGAACAGCAAACTAATTCAATGTTTTGTAAGATAAAAACAGAGAATGAGCTTTTACACAACCCAATGCAGGAAAGTGGATTAGATCAAGAATCTGAGGAAGATTGGGAGATTGATGAATAGAGCTGGGGAAGAGCTCGTTCAAGGGCAACAATATTTTCCCCTTTTCTTTTCGTGTCTTTTTAGAACTAATTTATTTTCTGTATTAATTTCTGCTGCAAATGGCCTTTTTTTATTTATAGATAATTAGTTAGATTTAGATCGGGCCTTACAATATCCATCAAAGAGTTCAATGTTTATTTTTAAGTTAGAACTCGCTTCATTTGTTAACCAAATGTTTGTAATTGCTTTATGCCAACTCCAAAAGACTATGCCCCGATCGGGATGGCGTTTGTTACTGTTAGAGGAAAAAGCTATTGTTGGAGAATCAAAACTTGGTAAATTTATATAAAATCGCATTTCGAATTCAAA

mRNA sequence

TAAAAATATTATGGAAAAAGGGGAAAAAAAACAAAAAACAGTCTAATTATGTCCGTCGTGAAACAAACAAAAGGGCACTCCTAGCCGGTCCAAACTCGCACTCGGCAAGAGCGAGTCCGGGCCGAGCTTTGCCAATTGAAGACTAAGGGAGAGCACAACGGCGCAGAACAATGGCGAAAGCGAAAAAGCCCCAAAAATCACCTTCAGCTTCTGCGCATGATTCTTCCGAAGCTTTTGAAGAAGCGTCTCCAGAGGACACGGGATTATGTGTAAAAAGAAGCGAAGAGATGAAAAGGGCAGCAAAAGCTAGCAGATTTAACACGGATAATAAGAGAACGAAGACAATTAAGAAGCCAAAATCAAAGCAGAAGAAAAAAAATGATAAATTTGACGTCAATAAGCCAAAGAAACCACCTACTGCTTTCTTTTACTTTCTGGATGACTTCCGCAAGGAATTTCAAGAACAGAATCCAGATGTCAAGACAATGCGTGATGTTGGCAAGGCTTGTGGGGAGAAATGGAAAACAATGACGTATGAGGAAAAAGTACAATATTATGATATTGCCACACAGAAACGTGCAGAGTTTGATAAAGCCATGGCAGAATACAAGAAGAGGAAGGAAAGTGGATTAGATCAAGAATCTGAGGAAGATTGGGAGATTGATGAATAGAGCTGGGGAAGAGCTCGTTCAAGGGCAACAATATTTTCCCCTTTTCTTTTCGTGTCTTTTTAGAACTAATTTATTTTCTGTATTAATTTCTGCTGCAAATGGCCTTTTTTTATTTATAGATAATTAGTTAGATTTAGATCGGGCCTTACAATATCCATCAAAGAGTTCAATGTTTATTTTTAAGTTAGAACTCGCTTCATTTGTTAACCAAATGTTTGTAATTGCTTTATGCCAACTCCAAAAGACTATGCCCCGATCGGGATGGCGTTTGTTACTGTTAGAGGAAAAAGCTATTGTTGGAGAATCAAAACTTGGTAAATTTATATAAAATCGCATTTCGAATTCAAA

Coding sequence (CDS)

ATGGCGAAAGCGAAAAAGCCCCAAAAATCACCTTCAGCTTCTGCGCATGATTCTTCCGAAGCTTTTGAAGAAGCGTCTCCAGAGGACACGGGATTATGTGTAAAAAGAAGCGAAGAGATGAAAAGGGCAGCAAAAGCTAGCAGATTTAACACGGATAATAAGAGAACGAAGACAATTAAGAAGCCAAAATCAAAGCAGAAGAAAAAAAATGATAAATTTGACGTCAATAAGCCAAAGAAACCACCTACTGCTTTCTTTTACTTTCTGGATGACTTCCGCAAGGAATTTCAAGAACAGAATCCAGATGTCAAGACAATGCGTGATGTTGGCAAGGCTTGTGGGGAGAAATGGAAAACAATGACGTATGAGGAAAAAGTACAATATTATGATATTGCCACACAGAAACGTGCAGAGTTTGATAAAGCCATGGCAGAATACAAGAAGAGGAAGGAAAGTGGATTAGATCAAGAATCTGAGGAAGATTGGGAGATTGATGAATAG

Protein sequence

MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIKKPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE

Homology

[Close]

BLAST of Bhi03G000060 vs. TAIR 10
Match: AT2G34450.1 (HMG-box (high mobility group) DNA-binding family protein )

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34
Identity = 79/141 (56.03%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 26  SPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIKKPKSKQKKKNDKFDVNKPKKPPTAF 85
           S  +  L VK SE  +R+ +         R + ++KPK+  KKK  K     PKKP TAF
Sbjct: 19  SSRNLELAVKSSEGARRSTRL--------RLQPLRKPKTSPKKKPVKLQTKMPKKPATAF 78

Query: 86  FYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAE 145
           F+FLDDFRK++QE+NPDVK+MR++GK CGEKWKTMTYEEKV+YYDIAT+KR EF +AM E
Sbjct: 79  FFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTE 138

Query: 146 YKKRKESGLDQESEEDWEIDE 167
           Y KR ESG   ESE D +  E
Sbjct: 139 YTKRMESGAHDESETDSDYSE 151

[Close]

BLAST of Bhi03G000060 vs. TAIR 10
Match: AT2G34450.2 (HMG-box (high mobility group) DNA-binding family protein )

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-33
Identity = 80/142 (56.34%), Postives = 98/142 (69.01%), Query Frame = 0


Query: 26  SPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIKKPKSKQKKKNDKFDVNKPKKPPTAF 85
           S  +  L VK SE  +R+ +         R + ++KPK+  KKK  K     PKKP TAF
Sbjct: 19  SSRNLELAVKSSEGARRSTRL--------RLQPLRKPKTSPKKKPVKLQTKMPKKPATAF 78

Query: 86  FYFLDDFRKEFQEQNPDVKTMRDV-GKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMA 145
           F+FLDDFRK++QE+NPDVK+MR+V GK CGEKWKTMTYEEKV+YYDIAT+KR EF +AM 
Sbjct: 79  FFFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMT 138

Query: 146 EYKKRKESGLDQESEEDWEIDE 167
           EY KR ESG   ESE D +  E
Sbjct: 139 EYTKRMESGAHDESETDSDYSE 152

[Close]

BLAST of Bhi03G000060 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 )

HSP 1 Score: 84.7 bits (208), Expect = 7.5e-17
Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 41  KRAAKASRFNTDNKRTKTIKKPKSKQ--KKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQE 100
           K A K        KR    +KP  ++  K+K  K D NKPK+ P+AFF FL+DFR  F++
Sbjct: 14  KEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKK 73

Query: 101 QNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQES 160
           +NP+VK +  VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K  E G D+  
Sbjct: 74  ENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESE 133

Query: 161 EEDWEIDE 167
           +   EI++
Sbjct: 134 KSRSEIND 141

[Close]

BLAST of Bhi03G000060 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 )

HSP 1 Score: 84.7 bits (208), Expect = 7.5e-17
Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 41  KRAAKASRFNTDNKRTKTIKKPKSKQ--KKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQE 100
           K A K        KR    +KP  ++  K+K  K D NKPK+ P+AFF FL+DFR  F++
Sbjct: 14  KEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKK 73

Query: 101 QNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQES 160
           +NP+VK +  VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K  E G D+  
Sbjct: 74  ENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESE 133

Query: 161 EEDWEIDE 167
           +   EI++
Sbjct: 134 KSRSEIND 141

[Close]

BLAST of Bhi03G000060 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 )

HSP 1 Score: 84.7 bits (208), Expect = 7.5e-17
Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 41  KRAAKASRFNTDNKRTKTIKKPKSKQ--KKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQE 100
           K A K        KR    +KP  ++  K+K  K D NKPK+ P+AFF FL+DFR  F++
Sbjct: 14  KEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKK 73

Query: 101 QNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQES 160
           +NP+VK +  VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K  E G D+  
Sbjct: 74  ENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESE 133

Query: 161 EEDWEIDE 167
           +   EI++
Sbjct: 134 KSRSEIND 141

[Close]

BLAST of Bhi03G000060 vs. ExPASy Swiss-Prot
Match: O64702 (High mobility group B protein 14 OS=Arabidopsis thaliana OX=3702 GN=HMGB14 PE=2 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-33
Identity = 79/141 (56.03%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 26  SPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIKKPKSKQKKKNDKFDVNKPKKPPTAF 85
           S  +  L VK SE  +R+ +         R + ++KPK+  KKK  K     PKKP TAF
Sbjct: 19  SSRNLELAVKSSEGARRSTRL--------RLQPLRKPKTSPKKKPVKLQTKMPKKPATAF 78

Query: 86  FYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAE 145
           F+FLDDFRK++QE+NPDVK+MR++GK CGEKWKTMTYEEKV+YYDIAT+KR EF +AM E
Sbjct: 79  FFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTE 138

Query: 146 YKKRKESGLDQESEEDWEIDE 167
           Y KR ESG   ESE D +  E
Sbjct: 139 YTKRMESGAHDESETDSDYSE 151

[Close]

BLAST of Bhi03G000060 vs. ExPASy Swiss-Prot
Match: O49595 (High mobility group B protein 1 OS=Arabidopsis thaliana OX=3702 GN=HMGB1 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15
Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 41  KRAAKASRFNTDNKRTKTIKKPKSKQ--KKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQE 100
           K A K        KR    +KP  ++  K+K  K D NKPK+ P+AFF FL+DFR  F++
Sbjct: 14  KEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKK 73

Query: 101 QNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQES 160
           +NP+VK +  VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K  E G D+  
Sbjct: 74  ENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESE 133

Query: 161 EEDWEIDE 167
           +   EI++
Sbjct: 134 KSRSEIND 141

[Close]

BLAST of Bhi03G000060 vs. ExPASy Swiss-Prot
Match: P40619 (HMG1/2-like protein OS=Ipomoea nil OX=35883 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-14
Identity = 46/115 (40.00%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 47  SRFNTDNKRTKTIKKPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTM 106
           S+  +DNK     +   +K+ KK  K D NKPK+PP+AFF F++DFRK ++E++P+ K++
Sbjct: 6   SKAKSDNKLAVKKQAADTKKTKKAVK-DPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSV 65

Query: 107 RDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEED 162
             VGKA G+KWK +T  EK  +   A +++ E++K +  Y K++ +G  +E E D
Sbjct: 66  AVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAGAAEEEESD 119

[Close]

BLAST of Bhi03G000060 vs. ExPASy Swiss-Prot
Match: P40620 (HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.6e-14
Identity = 46/127 (36.22%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 34  VKRSEEMKRAAKASRFNTDNKRTKTIKKPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFR 93
           +K  +    + KA      NK+     K   K  K  +  D NKPK+PP+AFF F+ DFR
Sbjct: 1   MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFR 60

Query: 94  KEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAEYKKRKESG 153
           +++++ +P+ K++  VGKACGE+WK+++ EEK  Y D A +K+ E++  +  Y K+ E  
Sbjct: 61  EQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLEGK 120

Query: 154 LDQESEE 161
            D+E  +
Sbjct: 121 DDEEGSD 127

[Close]

BLAST of Bhi03G000060 vs. ExPASy Swiss-Prot
Match: Q42344 (High mobility group B protein 4 OS=Arabidopsis thaliana OX=3702 GN=HMGB4 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-13
Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 44  AKASRFNTDNKRTKTIKKPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDV 103
           +KA   +TD +R KT  +   K+ KK    D N+PK+PP+AFF FL+DFRKEF   NP+ 
Sbjct: 6   SKAEATSTD-QRLKTRGRKAGKKTKK----DPNQPKRPPSAFFVFLEDFRKEFNLANPNN 65

Query: 104 KTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEED-- 163
           K++  VGKA G +WK MT E+K  Y   A  ++ E+ K + +Y  +  SG ++E ++   
Sbjct: 66  KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 125

Query: 164 --WEIDE 167
              E+DE
Sbjct: 126 SKSEVDE 127

[Close]

BLAST of Bhi03G000060 vs. NCBI nr
Match: XP_038881049.1 (high mobility group B protein 14 isoform X1 [Benincasa hispida])

HSP 1 Score: 315.8 bits (808), Expect = 2.1e-82
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60
           MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK
Sbjct: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60

Query: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120
           KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM
Sbjct: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120

Query: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE 167
           TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE
Sbjct: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE 166

[Close]

BLAST of Bhi03G000060 vs. NCBI nr
Match: XP_022926030.1 (high mobility group B protein 14 [Cucurbita moschata] >XP_022926031.1 high mobility group B protein 14 [Cucurbita moschata] >KAG7034701.1 High mobility group B protein 14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73
Identity = 150/166 (90.36%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60
           MAKAKKPQKSPS +AHDSSEAFEEAS EDTGLCVKRSEEMKR+AK  RFN   K TKT K
Sbjct: 1   MAKAKKPQKSPSTAAHDSSEAFEEASQEDTGLCVKRSEEMKRSAKGRRFNNTEKSTKTNK 60

Query: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120
           +PKS QKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTM
Sbjct: 61  RPKSNQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTM 120

Query: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE 167
           TYEEKVQYYDIAT+KRAEFDKAMAEYKKRKESG+DQESEEDWEIDE
Sbjct: 121 TYEEKVQYYDIATEKRAEFDKAMAEYKKRKESGVDQESEEDWEIDE 166

[Close]

BLAST of Bhi03G000060 vs. NCBI nr
Match: XP_023544425.1 (high mobility group B protein 14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73
Identity = 150/166 (90.36%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60
           MAKAKKPQKSPS +AHDSSEAFEEAS EDTGLCVKRSEEMKR+AKA RFN+  K TKT K
Sbjct: 1   MAKAKKPQKSPSTAAHDSSEAFEEASQEDTGLCVKRSEEMKRSAKARRFNSTEKSTKTNK 60

Query: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120
           +PKS QKKKNDK DVNKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTM
Sbjct: 61  RPKSNQKKKNDKIDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTM 120

Query: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE 167
           TYEEKVQYYDIAT+KRAEFDKAMAEYKKRKESG+DQESEEDWEIDE
Sbjct: 121 TYEEKVQYYDIATEKRAEFDKAMAEYKKRKESGVDQESEEDWEIDE 166

[Close]

BLAST of Bhi03G000060 vs. NCBI nr
Match: KAG6581419.1 (High mobility group B protein 14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 149/166 (89.76%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60
           MAKAKKPQKSPS +AHDSSEAFEEAS E TGLCVKRSEEMKR+AK  RFN   K TKT K
Sbjct: 1   MAKAKKPQKSPSTAAHDSSEAFEEASQEATGLCVKRSEEMKRSAKGRRFNNTEKSTKTNK 60

Query: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120
           +PKS QKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTM
Sbjct: 61  RPKSNQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTM 120

Query: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE 167
           TYEEKVQYYDIAT+KRAEFDKAMAEYKKRKESG+DQESEEDWEIDE
Sbjct: 121 TYEEKVQYYDIATEKRAEFDKAMAEYKKRKESGVDQESEEDWEIDE 166

[Close]

BLAST of Bhi03G000060 vs. NCBI nr
Match: XP_022978337.1 (high mobility group B protein 14 [Cucurbita maxima])

HSP 1 Score: 281.2 bits (718), Expect = 5.9e-72
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60
           MAKAKKPQKSPS +AHDSSEAFEEAS EDTGLCVKRSEEMKR+AK  RFN   K TKT K
Sbjct: 1   MAKAKKPQKSPSTAAHDSSEAFEEASQEDTGLCVKRSEEMKRSAKGRRFNNTEKSTKTNK 60

Query: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120
           +PKS QKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACG+KWKTM
Sbjct: 61  RPKSNQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGKKWKTM 120

Query: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE 167
           TYEEKVQYYDIA +KRAEFDKAMAEYKKRKESG+D+ESEEDWEIDE
Sbjct: 121 TYEEKVQYYDIAMEKRAEFDKAMAEYKKRKESGVDRESEEDWEIDE 166

[Close]

BLAST of Bhi03G000060 vs. ExPASy TrEMBL
Match: A0A6J1EJV4 (high mobility group B protein 14 OS=Cucurbita moschata OX=3662 GN=LOC111433268 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.7e-74
Identity = 150/166 (90.36%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60
           MAKAKKPQKSPS +AHDSSEAFEEAS EDTGLCVKRSEEMKR+AK  RFN   K TKT K
Sbjct: 1   MAKAKKPQKSPSTAAHDSSEAFEEASQEDTGLCVKRSEEMKRSAKGRRFNNTEKSTKTNK 60

Query: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120
           +PKS QKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTM
Sbjct: 61  RPKSNQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTM 120

Query: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE 167
           TYEEKVQYYDIAT+KRAEFDKAMAEYKKRKESG+DQESEEDWEIDE
Sbjct: 121 TYEEKVQYYDIATEKRAEFDKAMAEYKKRKESGVDQESEEDWEIDE 166

[Close]

BLAST of Bhi03G000060 vs. ExPASy TrEMBL
Match: A0A6J1IKU3 (high mobility group B protein 14 OS=Cucurbita maxima OX=3661 GN=LOC111478363 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.8e-72
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60
           MAKAKKPQKSPS +AHDSSEAFEEAS EDTGLCVKRSEEMKR+AK  RFN   K TKT K
Sbjct: 1   MAKAKKPQKSPSTAAHDSSEAFEEASQEDTGLCVKRSEEMKRSAKGRRFNNTEKSTKTNK 60

Query: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120
           +PKS QKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACG+KWKTM
Sbjct: 61  RPKSNQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGKKWKTM 120

Query: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEIDE 167
           TYEEKVQYYDIA +KRAEFDKAMAEYKKRKESG+D+ESEEDWEIDE
Sbjct: 121 TYEEKVQYYDIAMEKRAEFDKAMAEYKKRKESGVDRESEEDWEIDE 166

[Close]

BLAST of Bhi03G000060 vs. ExPASy TrEMBL
Match: A0A1S3AZW3 (high mobility group B protein 14 OS=Cucumis melo OX=3656 GN=LOC103484380 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 147/165 (89.09%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60
           MAKAK  QKSPSASAHDSS    EAS E TGL VKR +EMK AAKASRFNTDNKRTKTIK
Sbjct: 1   MAKAKNLQKSPSASAHDSS----EASSEVTGLRVKRRKEMKSAAKASRFNTDNKRTKTIK 60

Query: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120
           KPKSKQKKKND+FDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM
Sbjct: 61  KPKSKQKKKNDRFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120

Query: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEID 166
           TYEEKVQYYDIAT+KRAEFDKAM EYKKR ESG+ QESEEDWEID
Sbjct: 121 TYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID 161

[Close]

BLAST of Bhi03G000060 vs. ExPASy TrEMBL
Match: A0A0A0KKL8 (HMG box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522770 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.0e-66
Identity = 145/165 (87.88%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 1   MAKAKKPQKSPSASAHDSSEAFEEASPEDTGLCVKRSEEMKRAAKASRFNTDNKRTKTIK 60
           MAKAK PQKS SASA DSS    EAS E+TGL VKRSE MK AAKASRFNTD KR KTIK
Sbjct: 1   MAKAKNPQKSSSASARDSS----EASSENTGLRVKRSENMKSAAKASRFNTD-KRAKTIK 60

Query: 61  KPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120
           KP SKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM
Sbjct: 61  KPNSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTM 120

Query: 121 TYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESEEDWEID 166
           TYEEKVQYYDIAT+KRAEFDKAM EYKKR ESG+DQESEEDW ID
Sbjct: 121 TYEEKVQYYDIATEKRAEFDKAMTEYKKRMESGIDQESEEDWAID 160

[Close]

BLAST of Bhi03G000060 vs. ExPASy TrEMBL
Match: A0A6J1CXW3 (high mobility group B protein 14 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015820 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.0e-54
Identity = 113/126 (89.68%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 40  MKRAAKASRFNTDNKRTKTIKKPKSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQ 99
           MKR+A+ASRFN+D KR KT K+PKSK+KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQ
Sbjct: 1   MKRSARASRFNSD-KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQ 60

Query: 100 NPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIATQKRAEFDKAMAEYKKRKESGLDQESE 159
           NPDVK+MRDVGKACGEKWKTMTYEEKVQYYDIAT+KRAEFDKAMAEYKKRKESG+D+ESE
Sbjct: 61  NPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKESGIDEESE 120

Query: 160 EDWEID 166
           EDWEID
Sbjct: 121 EDWEID 125

The following BLAST results are available for this feature:

BLAST of Bhi03G000060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34450.1	1.8e-34	56.03	HMG-box (high mobility group) DNA-binding family protein	[more]
AT2G34450.2	3.3e-33	56.34	HMG-box (high mobility group) DNA-binding family protein	[more]
AT3G51880.1	7.5e-17	41.41	high mobility group B1	[more]
AT3G51880.2	7.5e-17	41.41	high mobility group B1	[more]
AT3G51880.3	7.5e-17	41.41	high mobility group B1	[more]

BLAST of Bhi03G000060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64702	2.5e-33	56.03	High mobility group B protein 14 OS=Arabidopsis thaliana OX=3702 GN=HMGB14 PE=2 ...	[more]
O49595	1.1e-15	41.41	High mobility group B protein 1 OS=Arabidopsis thaliana OX=3702 GN=HMGB1 PE=1 SV...	[more]
P40619	3.4e-14	40.00	HMG1/2-like protein OS=Ipomoea nil OX=35883 PE=2 SV=1	[more]
P40620	7.6e-14	36.22	HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1	[more]
Q42344	1.7e-13	40.94	High mobility group B protein 4 OS=Arabidopsis thaliana OX=3702 GN=HMGB4 PE=1 SV...	[more]

BLAST of Bhi03G000060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881049.1	2.1e-82	100.00	high mobility group B protein 14 isoform X1 [Benincasa hispida]	[more]
XP_022926030.1	1.4e-73	90.36	high mobility group B protein 14 [Cucurbita moschata] >XP_022926031.1 high mobil...	[more]
XP_023544425.1	1.8e-73	90.36	high mobility group B protein 14 [Cucurbita pepo subsp. pepo]	[more]
KAG6581419.1	1.2e-72	89.76	High mobility group B protein 14, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022978337.1	5.9e-72	88.55	high mobility group B protein 14 [Cucurbita maxima]	[more]

BLAST of Bhi03G000060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJV4	6.7e-74	90.36	high mobility group B protein 14 OS=Cucurbita moschata OX=3662 GN=LOC111433268 P...	[more]
A0A6J1IKU3	2.8e-72	88.55	high mobility group B protein 14 OS=Cucurbita maxima OX=3661 GN=LOC111478363 PE=...	[more]
A0A1S3AZW3	1.1e-68	89.09	high mobility group B protein 14 OS=Cucumis melo OX=3656 GN=LOC103484380 PE=4 SV...	[more]
A0A0A0KKL8	3.0e-66	87.88	HMG box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522770 PE=...	[more]
A0A6J1CXW3	2.0e-54	89.68	high mobility group B protein 14 isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 77..148 e-value: 4.3E-20 score: 82.7
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 78..147 e-value: 1.8E-18 score: 66.7
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 78..147 score: 17.57246
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 73..161 e-value: 1.5E-22 score: 81.7
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 63..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	PANTHER	PTHR47658:SF4	HIGH MOBILITY GROUP B PROTEIN 14	coord: 2..165
None	No IPR available	PANTHER	PTHR47658	HIGH MOBILITY GROUP B PROTEIN 12-RELATED	coord: 2..165
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 78..144 e-value: 8.03549E-15 score: 63.4157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000060	Bhi03M000060	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010197	polar nucleus fusion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding