Bhi02G001794 (gene) Wax gourd (B227) v1

Overview


Name	Bhi02G001794
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Exonuclease domain-containing protein
Location	chr2: 58884452 .. 58886937 (+)
RNA-Seq Expression	Bhi02G001794
Synteny	Bhi02G001794

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGAAAGAAAAAATCACACGATCCGTAAGTTAAGCTATGTCTGATTTTTATTTTTTATTTTATTTTTGTCTGAAGAATAATAATTGAAGAAGCAACGAAACTAAAAATCCAAGCAGCAGTTTCTTCCGATTTCCATGTCTCCGAAAAGCACGTCTCCATCTTCTTCCCCACGATTTATAGCCCTTCTTTTTCTCTTTTAACTTACTTTCTTCTGTTGAATTTCAAATGCAGCATAATCCTCCCTCAGATTTCCTTTCAGGCGAGTTCTTTCTCTCGCTTGCTCTGTAAGTTCCCTGTTTCTGCATTGAAAAAAAAATGATTCAAAATACGGAAAAAGGGGGAAGATGTTGTTTTCTTTTGTAATTCGAAAGTAAATAGTTTGATGTTGCTTGATGATTAAATGGTTCGATTGTTGTTTCCGCCGTAACCCATTTTTTCCAATCTGATGCAGCAGTTTTTAATCTGGACGTGTTAAGTGCGAGCGATCAATTGGTTTTGCGTTGTTTGATTTTGGGTTTCTTTGATTTCTAGTTATAAATGATTTTGTGGAGTATTGGGGAAGGATTGGAGATGGTGGGAGTTGGGAGTTGGGAGTGTTCTTGGCCAATTGGATTTGATTACAAAATGTTTGTGAAAAGGCCTGAATGAGCTCGTGATATATAAATTCAACCTTTTTTATCAAATTTTTTGTCTTGACTTAATTGTGCTTGTTCTTTTGAGATCATTTGGTGTTCTCAATTTTTTTTTTTTTTTTTGTTTATTATTCGGGTTATTCTGTTTAATAATCAATGTGAAGAAATTAAAGTTGATCCCTTTTTGTTTCTTGGTTTGATATGGTCTTATGCATTTTTTGTCACCTCATTATCTACAGGTTGAAGAAATTTGCTTCCGATGCTGGGTTTTGTTGGATTTTCTGTCTAGATTTCCTCTTGTTGTGTTGTGAATTCAAATGATACTAGCTCCAATGTGCTTTTCGATCTTGCGATTTCCGAAATTTGGAGTTCCTACTTTAGCTAATCTTTGGAGGGAAAACTTCCATCCTTTGAACAGGAATTGTTATCATAGTTCTTGGCATGATCAACTTGGTTTTAGGATCTATAACCTTGAAGGAGGGCAGAACAAGAGATGGATCAGAAAATCTATGACCACCAAGGCAGGGAGGAAAGCAAAAGCCAACCCTAGCAGTAAACCAACCAATATCAGGAATGAAATCCTTGAGGAATCGATCTCAACAAGCTGTACAGTTAGCATTAATAAGTCTGAGAAAAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAACAATTAATTATTAAGAACAAGGAATTAGCTCGCCCGGTGACGGTTATAACCTTCGACATTGAAACAACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAGATTGCACTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACATTAATAAATCCAGAGTGCTATATTCCAAATTCAGTTGTACATGGCATTACAAACCATATGGTCAGTAGACCCGATGTTCCAAGGTATCAAAACATTTGTTGTAATCTGATTTCTCTTATATTGTCCATTCAGTTCAGTGCTAGTTATAGTTATTTATCAATCATATATTCATATGCATATTAAAACATTCCTTTTTCTATGTTCATATAGGATGAAGGAACTTATTCCAATTTTATTACAATTTGTCGAAAGCCGTCAGAAACAGAAACCTGATGGTTATGTATTGTTGGTAGCTCATAATGCTCGTACCTTCGACGTGCCCTTCTTACTCAAGGAATTCAGCCGTTGCTCCTTTGATATTCCTCCAAATTGGCGATTTTTCGATAGTATTCCCTTAGCCCGTCAATTGATGAAGTCCTCCGGTTAGTTTTCCCTTTCCACATGTTATCTTGCTCTAGTTTATCTGTGAATAAAAGGATTGATGTGATGTAATGTAATATTGATGGCAATATCATGATCAGATTCGAAGATTACGAAAATATCGTTACAAGCTCTTCGTGAGTATTATGATATACAACTGGTGGGTTCAGCTCACCGAGCAATGTCAGATGTGAGGTCGTTGTCGTTGATTCTTCAGAGGCTTACTTTCGAGCTCAAGCTAGGTATCTCAGATCTCATTGAAAGATCTTTCACTGCTTCAGATCTAATTAATAAGAAGAAAAACTAGTCTCTTAAGTTATGTGCACAAATCAATCTTATTAACATAGTGATCAAGCCGTGCTTTTGTTGTAATGTTATTTACTAATTGTTGTAACTTCAGTTCATTCTTATTAGCAAAATGTTGGGCCAATTTATTTCTGGTCAGCAGATTTGTCTTGATGTCCATATTCTCCAAAAACTAGTGCCTGAATTGAAATGTCATGACATATAGTTTCTTTTTTCTTTTTTTTTTTTCCCTTGCTTTGAATGGATACTGAGATAAACAGTTGTTTATCAAGAAATATGAAAGGAAGATGTGTGTTCTGTTTTGA

mRNA sequence

ATTAGAAAGAAAAAATCACACGATCCGTAAGTTAAGCTATGTCTGATTTTTATTTTTTATTTTATTTTTGTCTGAAGAATAATAATTGAAGAAGCAACGAAACTAAAAATCCAAGCAGCAGTTTCTTCCGATTTCCATGTCTCCGAAAAGCACGTCTCCATCTTCTTCCCCACGATTTATAGCCCTTCTTTTTCTCTTTTAACTTACTTTCTTCTGTTGAATTTCAAATGCAGCATAATCCTCCCTCAGATTTCCTTTCAGGCGAGTTCTTTCTCTCGCTTGCTCTGTTGAAGAAATTTGCTTCCGATGCTGGGTTTTGTTGGATTTTCTGTCTAGATTTCCTCTTGTTGTGTTGTGAATTCAAATGATACTAGCTCCAATGTGCTTTTCGATCTTGCGATTTCCGAAATTTGGAGTTCCTACTTTAGCTAATCTTTGGAGGGAAAACTTCCATCCTTTGAACAGGAATTGTTATCATAGTTCTTGGCATGATCAACTTGGTTTTAGGATCTATAACCTTGAAGGAGGGCAGAACAAGAGATGGATCAGAAAATCTATGACCACCAAGGCAGGGAGGAAAGCAAAAGCCAACCCTAGCAGTAAACCAACCAATATCAGGAATGAAATCCTTGAGGAATCGATCTCAACAAGCTGTACAGTTAGCATTAATAAGTCTGAGAAAAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAACAATTAATTATTAAGAACAAGGAATTAGCTCGCCCGGTGACGGTTATAACCTTCGACATTGAAACAACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAGATTGCACTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACATTAATAAATCCAGAGTGCTATATTCCAAATTCAGTTGTACATGGCATTACAAACCATATGGTCAGTAGACCCGATGTTCCAAGGATGAAGGAACTTATTCCAATTTTATTACAATTTGTCGAAAGCCGTCAGAAACAGAAACCTGATGGTTATGTATTGTTGGTAGCTCATAATGCTCGTACCTTCGACGTGCCCTTCTTACTCAAGGAATTCAGCCGTTGCTCCTTTGATATTCCTCCAAATTGGCGATTTTTCGATAGTATTCCCTTAGCCCGTCAATTGATGAAGTCCTCCGATTCGAAGATTACGAAAATATCGTTACAAGCTCTTCGTGAGTATTATGATATACAACTGGTGGGTTCAGCTCACCGAGCAATGTCAGATGTGAGGTCGTTGTCGTTGATTCTTCAGAGGCTTACTTTCGAGCTCAAGCTAGGTATCTCAGATCTCATTGAAAGATCTTTCACTGCTTCAGATCTAATTAATAAGAAGAAAAACTAGTCTCTTAAGTTATGTGCACAAATCAATCTTATTAACATAGTGATCAAGCCGTGCTTTTGTTGTAATGTTATTTACTAATTGTTGTAACTTCAGTTCATTCTTATTAGCAAAATGTTGGGCCAATTTATTTCTGGTCAGCAGATTTGTCTTGATGTCCATATTCTCCAAAAACTAGTGCCTGAATTGAAATGTCATGACATATAGTTTCTTTTTTCTTTTTTTTTTTTCCCTTGCTTTGAATGGATACTGAGATAAACAGTTGTTTATCAAGAAATATGAAAGGAAGATGTGTGTTCTGTTTTGA

Coding sequence (CDS)

ATGATACTAGCTCCAATGTGCTTTTCGATCTTGCGATTTCCGAAATTTGGAGTTCCTACTTTAGCTAATCTTTGGAGGGAAAACTTCCATCCTTTGAACAGGAATTGTTATCATAGTTCTTGGCATGATCAACTTGGTTTTAGGATCTATAACCTTGAAGGAGGGCAGAACAAGAGATGGATCAGAAAATCTATGACCACCAAGGCAGGGAGGAAAGCAAAAGCCAACCCTAGCAGTAAACCAACCAATATCAGGAATGAAATCCTTGAGGAATCGATCTCAACAAGCTGTACAGTTAGCATTAATAAGTCTGAGAAAAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAACAATTAATTATTAAGAACAAGGAATTAGCTCGCCCGGTGACGGTTATAACCTTCGACATTGAAACAACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAGATTGCACTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACATTAATAAATCCAGAGTGCTATATTCCAAATTCAGTTGTACATGGCATTACAAACCATATGGTCAGTAGACCCGATGTTCCAAGGATGAAGGAACTTATTCCAATTTTATTACAATTTGTCGAAAGCCGTCAGAAACAGAAACCTGATGGTTATGTATTGTTGGTAGCTCATAATGCTCGTACCTTCGACGTGCCCTTCTTACTCAAGGAATTCAGCCGTTGCTCCTTTGATATTCCTCCAAATTGGCGATTTTTCGATAGTATTCCCTTAGCCCGTCAATTGATGAAGTCCTCCGATTCGAAGATTACGAAAATATCGTTACAAGCTCTTCGTGAGTATTATGATATACAACTGGTGGGTTCAGCTCACCGAGCAATGTCAGATGTGAGGTCGTTGTCGTTGATTCTTCAGAGGCTTACTTTCGAGCTCAAGCTAGGTATCTCAGATCTCATTGAAAGATCTTTCACTGCTTCAGATCTAATTAATAAGAAGAAAAACTAG

Protein sequence

MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSLSLILQRLTFELKLGISDLIERSFTASDLINKKKN

Homology

[Close]

BLAST of Bhi02G001794 vs. TAIR 10
Match: AT5G26940.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-63
Identity = 139/325 (42.77%), Postives = 205/325 (63.08%), Query Frame = 0


Query: 6   MCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSM 65
           MC SI +  +  + +  +   E  H   +N   SS    L  R  +++G    RWIR+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNK 125
           +T              +N ++ +L  ++  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST--------TTQGSRSNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSF 245
            N MV RP+VPRM+ELIPI L++VESR  QKP GYV+LVAHN ++FD  FL+ EF+RCS+
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESR--QKPGGYVMLVAHNGKSFDFQFLINEFNRCSY 240

Query: 246 DIPPNWRFFDSIPLARQLMKSSDSKI-TKISLQALREYYDIQLVGSAHRAMSDVRSLSLI 305
           +IP NW   DS+PLAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV  LS +
Sbjct: 241 EIPHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKV 300

Query: 306 LQRLTFELKLGISDLIERSFTASDL 329
            Q+LT +LKL +SDL+ R  TASD+
Sbjct: 301 FQKLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of Bhi02G001794 vs. TAIR 10
Match: AT5G26940.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-63
Identity = 139/325 (42.77%), Postives = 205/325 (63.08%), Query Frame = 0


Query: 6   MCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSM 65
           MC SI +  +  + +  +   E  H   +N   SS    L  R  +++G    RWIR+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNK 125
           +T              +N ++ +L  ++  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST--------TTQGSRSNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSF 245
            N MV RP+VPRM+ELIPI L++VESR  QKP GYV+LVAHN ++FD  FL+ EF+RCS+
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESR--QKPGGYVMLVAHNGKSFDFQFLINEFNRCSY 240

Query: 246 DIPPNWRFFDSIPLARQLMKSSDSKI-TKISLQALREYYDIQLVGSAHRAMSDVRSLSLI 305
           +IP NW   DS+PLAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV  LS +
Sbjct: 241 EIPHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKV 300

Query: 306 LQRLTFELKLGISDLIERSFTASDL 329
            Q+LT +LKL +SDL+ R  TASD+
Sbjct: 301 FQKLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of Bhi02G001794 vs. TAIR 10
Match: AT5G26940.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-63
Identity = 139/325 (42.77%), Postives = 205/325 (63.08%), Query Frame = 0


Query: 6   MCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSM 65
           MC SI +  +  + +  +   E  H   +N   SS    L  R  +++G    RWIR+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNK 125
           +T              +N ++ +L  ++  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST--------TTQGSRSNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSF 245
            N MV RP+VPRM+ELIPI L++VESR  QKP GYV+LVAHN ++FD  FL+ EF+RCS+
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESR--QKPGGYVMLVAHNGKSFDFQFLINEFNRCSY 240

Query: 246 DIPPNWRFFDSIPLARQLMKSSDSKI-TKISLQALREYYDIQLVGSAHRAMSDVRSLSLI 305
           +IP NW   DS+PLAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV  LS +
Sbjct: 241 EIPHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKV 300

Query: 306 LQRLTFELKLGISDLIERSFTASDL 329
            Q+LT +LKL +SDL+ R  TASD+
Sbjct: 301 FQKLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of Bhi02G001794 vs. TAIR 10
Match: AT5G26940.4 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-63
Identity = 139/325 (42.77%), Postives = 205/325 (63.08%), Query Frame = 0


Query: 6   MCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSM 65
           MC SI +  +  + +  +   E  H   +N   SS    L  R  +++G    RWIR+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNK 125
           +T              +N ++ +L  ++  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST--------TTQGSRSNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSF 245
            N MV RP+VPRM+ELIPI L++VESR  QKP GYV+LVAHN ++FD  FL+ EF+RCS+
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESR--QKPGGYVMLVAHNGKSFDFQFLINEFNRCSY 240

Query: 246 DIPPNWRFFDSIPLARQLMKSSDSKI-TKISLQALREYYDIQLVGSAHRAMSDVRSLSLI 305
           +IP NW   DS+PLAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV  LS +
Sbjct: 241 EIPHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKV 300

Query: 306 LQRLTFELKLGISDLIERSFTASDL 329
            Q+LT +LKL +SDL+ R  TASD+
Sbjct: 301 FQKLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of Bhi02G001794 vs. ExPASy Swiss-Prot
Match: Q682U6 (Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DPD1 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.3e-62
Identity = 139/325 (42.77%), Postives = 205/325 (63.08%), Query Frame = 0


Query: 6   MCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSM 65
           MC SI +  +  + +  +   E  H   +N   SS    L  R  +++G    RWIR+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNK 125
           +T              +N ++ +L  ++  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST--------TTQGSRSNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSF 245
            N MV RP+VPRM+ELIPI L++VESR  QKP GYV+LVAHN ++FD  FL+ EF+RCS+
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESR--QKPGGYVMLVAHNGKSFDFQFLINEFNRCSY 240

Query: 246 DIPPNWRFFDSIPLARQLMKSSDSKI-TKISLQALREYYDIQLVGSAHRAMSDVRSLSLI 305
           +IP NW   DS+PLAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV  LS +
Sbjct: 241 EIPHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKV 300

Query: 306 LQRLTFELKLGISDLIERSFTASDL 329
            Q+LT +LKL +SDL+ R  TASD+
Sbjct: 301 FQKLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of Bhi02G001794 vs. ExPASy Swiss-Prot
Match: Q895K2 (DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=polC PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.8e-14
Identity = 65/202 (32.18%), Postives = 104/202 (51.49%), Query Frame = 0


Query: 134 ITFDIETTGFSRNLDRIVEI-ALQDLSGGENSTFQTLINPECYIPNSVVH--GITNHMVS 193
           + FDIETTGFS   D+I+EI A++   G     + T +NPE  IP  ++   GI ++MV 
Sbjct: 414 VVFDIETTGFSNKNDKIIEIGAVKIKEGKVVDKYSTFVNPERIIPEKIIELTGIHDYMVK 473

Query: 194 RPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSFDIPPNW 253
             D P+++E++P  + F+E           +LVAHNA  FDV F+ K      F I  N 
Sbjct: 474 --DAPKIEEVLPKFIDFIEDS---------ILVAHNA-NFDVSFIKKNCK--DFGIHFNN 533

Query: 254 RFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSLSLILQRLTFE 313
              D+IPL + L      ++ +  L  + ++  I L+ + HRA+ D ++   IL +   +
Sbjct: 534 PILDTIPLCKFLY----PELKRYKLNVVAKHLGIPLL-NHHRAVEDAKTTGDILLKAFED 593

Query: 314 LK----LGISDLIERSFTASDL 329
           LK    + ++ L E  F   D+
Sbjct: 594 LKDKEIMNLNMLNEEYFKNQDI 596

[Close]

BLAST of Bhi02G001794 vs. ExPASy Swiss-Prot
Match: Q8XJR3 (DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=polC PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.7e-12
Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = 0


Query: 120 LIIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGE-NSTFQTLINPECYIPN 179
           ++I   E +     + FDIETTGFS   D+I+EI    L  GE   +F T ++P+  IP 
Sbjct: 422 IVINGHEESFDDEYVVFDIETTGFSSKNDKIIEIGAVKLKDGEIVDSFSTFVDPKVNIPY 481

Query: 180 SVVH--GITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLL 239
            +     IT +MV+    P + E++P  ++FV         G  +LVAHNA  FDV F+ 
Sbjct: 482 KITELTSITQNMVN--GQPTIDEVLPKFMEFV---------GNSVLVAHNA-AFDVGFIK 541

Query: 240 KEFSRCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSD 299
           K        +       D++PLAR L       + K+ L  + ++  I L  + HRA+ D
Sbjct: 542 KNLMDMGKTLKN--PVMDTVPLARYLYPD----LKKVKLNLVAKHLGISL-ENHHRAVDD 591

Query: 300 VRSLSLILQ 306
            ++ + IL+
Sbjct: 602 AKATAEILK 591

[Close]

BLAST of Bhi02G001794 vs. ExPASy Swiss-Prot
Match: Q5HPS7 (DNA polymerase III PolC-type OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=polC PE=3 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 7.8e-10
Identity = 57/208 (27.40%), Postives = 105/208 (50.48%), Query Frame = 0


Query: 129 RPVTVITFDIETTGFSRNLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSVVH--GIT 188
           +  T + FD+ETTG S   D+I+E+A   +  GE    F+   NP   +  ++++   IT
Sbjct: 418 KDATYVVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHIT 477

Query: 189 NHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSFD 248
           + M++  D P ++E++    ++V         G  + VAHNA +FD+ F+   + R  F 
Sbjct: 478 DDMLT--DAPEIEEVLTEFKEWV---------GDAIFVAHNA-SFDMGFIDTGYERLGFG 537

Query: 249 IPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSLSLILQ 308
            P      D++ L+R +    +++  K  L  L + Y ++L    HRA+ D  + + I  
Sbjct: 538 -PSTNGVIDTLELSRTI----NTEYGKHGLNFLAKKYGVELT-QHHRAIYDTEATAYIFI 597

Query: 309 RLTFELK-LGISDLIERSFTASDLINKK 333
           ++  ++K LG+++ +E        INKK
Sbjct: 598 KMVQQMKELGVNNHLE--------INKK 599

[Close]

BLAST of Bhi02G001794 vs. ExPASy Swiss-Prot
Match: Q8CPG6 (DNA polymerase III PolC-type OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=polC PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.8e-10
Identity = 57/208 (27.40%), Postives = 105/208 (50.48%), Query Frame = 0


Query: 129 RPVTVITFDIETTGFSRNLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSVVH--GIT 188
           +  T + FD+ETTG S   D+I+E+A   +  GE    F+   NP   +  ++++   IT
Sbjct: 422 KDATYVVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHIT 481

Query: 189 NHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSFD 248
           + M++  D P ++E++    ++V         G  + VAHNA +FD+ F+   + R  F 
Sbjct: 482 DDMLT--DAPEIEEVLTEFKEWV---------GDAIFVAHNA-SFDMGFIDTGYERLGFG 541

Query: 249 IPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSLSLILQ 308
            P      D++ L+R +    +++  K  L  L + Y ++L    HRA+ D  + + I  
Sbjct: 542 -PSTNGVIDTLELSRTI----NTEYGKHGLNFLAKKYGVELT-QHHRAIYDTEATAYIFI 601

Query: 309 RLTFELK-LGISDLIERSFTASDLINKK 333
           ++  ++K LG+++ +E        INKK
Sbjct: 602 KMVQQMKELGVNNHLE--------INKK 603

[Close]

BLAST of Bhi02G001794 vs. NCBI nr
Match: XP_038878496.1 (exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida] >XP_038878497.1 exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 664.1 bits (1712), Expect = 6.5e-187
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 1   MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW 60
           MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW
Sbjct: 1   MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW 60

Query: 61  IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL 120
           IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL
Sbjct: 61  IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV
Sbjct: 121 IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180

Query: 181 VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS 240
           VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS
Sbjct: 181 VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS 240

Query: 241 RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL 300
           RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL
Sbjct: 241 RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL 300

Query: 301 SLILQRLTFELKLGISDLIERSFTASDLINKKKN 335
           SLILQRLTFELKLGISDLIERSFTASDLINKKKN
Sbjct: 301 SLILQRLTFELKLGISDLIERSFTASDLINKKKN 334

[Close]

BLAST of Bhi02G001794 vs. NCBI nr
Match: XP_038878498.1 (exonuclease DPD1, chloroplastic/mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 593.2 bits (1528), Expect = 1.4e-165
Identity = 303/308 (98.38%), Postives = 303/308 (98.38%), Query Frame = 0


Query: 27  ENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSMTTKAGRKAKANPSSKPTNIRN 86
           E F  L  NCYHSSWHDQLGFRIYNLEGGQNKRWIRKSMTTKAGRKAKANPSSKPTNIRN
Sbjct: 13  EFFLSLALNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSMTTKAGRKAKANPSSKPTNIRN 72

Query: 87  EILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNKELARPVTVITFDIETTGFSRN 146
           EILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNKELARPVTVITFDIETTGFSRN
Sbjct: 73  EILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNKELARPVTVITFDIETTGFSRN 132

Query: 147 LDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITNHMVSRPDVPRMKELIPILLQ 206
           LDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITNHMVSRPDVPRMKELIPILLQ
Sbjct: 133 LDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITNHMVSRPDVPRMKELIPILLQ 192

Query: 207 FVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSFDIPPNWRFFDSIPLARQLMKSS 266
           FVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSFDIPPNWRFFDSIPLARQLMKSS
Sbjct: 193 FVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSFDIPPNWRFFDSIPLARQLMKSS 252

Query: 267 DSKITKISLQALREYYDIQLVGSAHRAMSDVRSLSLILQRLTFELKLGISDLIERSFTAS 326
           DSKITKISLQALREYYDIQLVGSAHRAMSDVRSLSLILQRLTFELKLGISDLIERSFTAS
Sbjct: 253 DSKITKISLQALREYYDIQLVGSAHRAMSDVRSLSLILQRLTFELKLGISDLIERSFTAS 312

Query: 327 DLINKKKN 335
           DLINKKKN
Sbjct: 313 DLINKKKN 320

[Close]

BLAST of Bhi02G001794 vs. NCBI nr
Match: KAG6590475.1 (Exonuclease DPD1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024006.1 Exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 578.9 bits (1491), Expect = 2.7e-161
Identity = 294/334 (88.02%), Postives = 314/334 (94.01%), Query Frame = 0


Query: 1   MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW 60
           MI APMCFSILR PKFGVPTLANLWRENFHPLNRN  HSSW+DQLGFRIYNLEGGQ+KRW
Sbjct: 1   MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRW 60

Query: 61  IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL 120
            RKSM+TKAGRKAK +PSSKP+NIRNEILEES+STSCTVSINKSEK+ TQKLQ C+IQ+ 
Sbjct: 61  TRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSEKNGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           I+K+KELARPVTVITFDIETTGFSR LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 IVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS 240
           VHGIT+ MVSRPDVPRMKELIPILLQF++SR  QKPDGYVLLVAHNARTFDVPFLLKEFS
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFIKSR--QKPDGYVLLVAHNARTFDVPFLLKEFS 240

Query: 241 RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL 300
           RCS DIP NW FFD+I LARQLMKS+DSKITKISLQALREYY+I LVGSAHRAMSDVR+L
Sbjct: 241 RCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTL 300

Query: 301 SLILQRLTFELKLGISDLIERSFTASDLINKKKN 335
           SLILQRLTF+LKLGI DLIERSFT SDLINKKKN
Sbjct: 301 SLILQRLTFDLKLGIPDLIERSFTTSDLINKKKN 332

[Close]

BLAST of Bhi02G001794 vs. NCBI nr
Match: XP_022961373.1 (exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata] >XP_022961374.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata])

HSP 1 Score: 577.0 bits (1486), Expect = 1.0e-160
Identity = 293/334 (87.72%), Postives = 313/334 (93.71%), Query Frame = 0


Query: 1   MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW 60
           MI APMCFSILR PKFGVPTLANLWRENFHPLNRN  HSSW+DQLGFR YNLEGGQ+KRW
Sbjct: 1   MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRTYNLEGGQDKRW 60

Query: 61  IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL 120
            RKSM+TKAGRKAK +PSSKP+NIRNEILEES+STSCTVSINKSEK+ TQKLQ C+IQ+ 
Sbjct: 61  TRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSEKNGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           I+K+KELARPVTVITFDIETTGFSR LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 IVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS 240
           VHGIT+ MVSRPDVPRMKELIPILLQF++SR  QKPDGYVLLVAHNARTFDVPFLLKEFS
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFIKSR--QKPDGYVLLVAHNARTFDVPFLLKEFS 240

Query: 241 RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL 300
           RCS DIP NW FFD+I LARQLMKS+DSKITKISLQALREYY+I LVGSAHRAMSDVR+L
Sbjct: 241 RCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTL 300

Query: 301 SLILQRLTFELKLGISDLIERSFTASDLINKKKN 335
           SLILQRLTF+LKLGI DLIERSFT SDLINKKKN
Sbjct: 301 SLILQRLTFDLKLGIPDLIERSFTTSDLINKKKN 332

[Close]

BLAST of Bhi02G001794 vs. NCBI nr
Match: XP_023515555.1 (exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 576.6 bits (1485), Expect = 1.4e-160
Identity = 293/334 (87.72%), Postives = 312/334 (93.41%), Query Frame = 0


Query: 1   MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW 60
           MI APMCFSILR PKFGVPTLANLWRENFHPLNRN  HSSW+DQLGFRIYNLEGGQNKRW
Sbjct: 1   MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQNKRW 60

Query: 61  IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL 120
            RKSM+TKAGRKAK +PSSKP+NIRNEILEES+STSCT+SINKSEK+ TQKLQ C+IQ+ 
Sbjct: 61  TRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTISINKSEKNGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           I K+KELARPVTVITFDIETTGFSR LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 ITKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS 240
           VHGIT+ MVSRPDVPRMKELIPILLQF++SR  QKPDGYVLLVAHNARTFDVPFLLKEFS
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFIKSR--QKPDGYVLLVAHNARTFDVPFLLKEFS 240

Query: 241 RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL 300
           RCS DIP NW FFD+I LARQLMKS+DSKI KISLQALREYY+I LVGSAHRAMSDVR+L
Sbjct: 241 RCSVDIPLNWLFFDNILLARQLMKSTDSKIKKISLQALREYYNIPLVGSAHRAMSDVRTL 300

Query: 301 SLILQRLTFELKLGISDLIERSFTASDLINKKKN 335
           SLILQRLTF+LKLGI DLIERSFT SDLINKKKN
Sbjct: 301 SLILQRLTFDLKLGIPDLIERSFTTSDLINKKKN 332

[Close]

BLAST of Bhi02G001794 vs. ExPASy TrEMBL
Match: A0A6J1HDU6 (exonuclease DPD1, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111461962 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 5.0e-161
Identity = 293/334 (87.72%), Postives = 313/334 (93.71%), Query Frame = 0


Query: 1   MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW 60
           MI APMCFSILR PKFGVPTLANLWRENFHPLNRN  HSSW+DQLGFR YNLEGGQ+KRW
Sbjct: 1   MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRTYNLEGGQDKRW 60

Query: 61  IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL 120
            RKSM+TKAGRKAK +PSSKP+NIRNEILEES+STSCTVSINKSEK+ TQKLQ C+IQ+ 
Sbjct: 61  TRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSEKNGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           I+K+KELARPVTVITFDIETTGFSR LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 IVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS 240
           VHGIT+ MVSRPDVPRMKELIPILLQF++SR  QKPDGYVLLVAHNARTFDVPFLLKEFS
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFIKSR--QKPDGYVLLVAHNARTFDVPFLLKEFS 240

Query: 241 RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL 300
           RCS DIP NW FFD+I LARQLMKS+DSKITKISLQALREYY+I LVGSAHRAMSDVR+L
Sbjct: 241 RCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTL 300

Query: 301 SLILQRLTFELKLGISDLIERSFTASDLINKKKN 335
           SLILQRLTF+LKLGI DLIERSFT SDLINKKKN
Sbjct: 301 SLILQRLTFDLKLGIPDLIERSFTTSDLINKKKN 332

[Close]

BLAST of Bhi02G001794 vs. ExPASy TrEMBL
Match: A0A6J1HUD7 (exonuclease DPD1, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467897 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.3e-160
Identity = 295/333 (88.59%), Postives = 310/333 (93.09%), Query Frame = 0


Query: 1   MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW 60
           MI A MCFSILR PKFGVPTLANLWRENFHPLNRN  HSSW+DQLGFRIYNLEGGQ+KRW
Sbjct: 1   MITASMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRW 60

Query: 61  IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL 120
            RKSMTTKAGRKAK NPSSKP+NIRNEILEES+STSCTVSINKSEK  TQKLQ C+IQ+ 
Sbjct: 61  TRKSMTTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           IIK+KELARPVTVITFDIETTGFSR LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 IIKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS 240
           VHGIT+ MVSRPDVPRMKELIPILLQFV+SR  QKPDGYVLLVAHNAR FDVPFLLKEFS
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFVKSR--QKPDGYVLLVAHNARIFDVPFLLKEFS 240

Query: 241 RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL 300
           RCS DIP NW FFD+I LARQLMKS+DSKITKISLQALREYY+I LVGSAHRAMSDVR+L
Sbjct: 241 RCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTL 300

Query: 301 SLILQRLTFELKLGISDLIERSFTASDLINKKK 334
           SLILQRLTF+LKLGI DLIERSFT SDLINKKK
Sbjct: 301 SLILQRLTFDLKLGIPDLIERSFTTSDLINKKK 331

[Close]

BLAST of Bhi02G001794 vs. ExPASy TrEMBL
Match: A0A6J1C1V8 (exonuclease DPD1, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007515 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.8e-150
Identity = 278/334 (83.23%), Postives = 295/334 (88.32%), Query Frame = 0


Query: 1   MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW 60
           MI  PMCFSILR PKFGV TLAN WR NFHPLNRN  HSSW+DQL FRIYNLEGGQNKRW
Sbjct: 1   MITVPMCFSILRVPKFGVHTLANFWRTNFHPLNRNYGHSSWYDQLCFRIYNLEGGQNKRW 60

Query: 61  IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL 120
            RKS+TTKAGRK K NPSSKP++IRNEILE S+STSCTVSINK+EKSETQKLQYCDIQQ 
Sbjct: 61  TRKSITTKAGRKVKNNPSSKPSDIRNEILEGSVSTSCTVSINKTEKSETQKLQYCDIQQT 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
             K KEL RPVTVI FDIETTGFSR  DRIVEIA QDLSGGENSTFQTLINPECYIPNS+
Sbjct: 121 FTKKKELTRPVTVIAFDIETTGFSRKKDRIVEIAFQDLSGGENSTFQTLINPECYIPNSL 180

Query: 181 VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS 240
           VHGIT+ MVSRPDVPRMK+LIPILLQFV SR  QKPDGY+LLVAHNARTFDVPFLL EFS
Sbjct: 181 VHGITSRMVSRPDVPRMKDLIPILLQFVLSR--QKPDGYILLVAHNARTFDVPFLLNEFS 240

Query: 241 RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL 300
           RCSFDIP +W F D++ LARQLM SSDSK++KISLQALREYY I LVGSAHRAMSDV SL
Sbjct: 241 RCSFDIPQDWLFLDNMILARQLMISSDSKLSKISLQALREYYSIPLVGSAHRAMSDVMSL 300

Query: 301 SLILQRLTFELKLGISDLIERSFTASDLINKKKN 335
           SLILQRLTF+LKL I DLIERSFTASDLI K K+
Sbjct: 301 SLILQRLTFDLKLEIPDLIERSFTASDLIKKNKD 332

[Close]

BLAST of Bhi02G001794 vs. ExPASy TrEMBL
Match: A0A0A0LVY3 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569080 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 6.8e-142
Identity = 262/328 (79.88%), Postives = 285/328 (86.89%), Query Frame = 0


Query: 6   MCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSM 65
           MC SI RFPK+GVP LANLWRENFHPLNRN  H+ W+DQL FRIYNLEGG+NKRW RKS+
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 66  TTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNK 125
           TTKAG KAK NPSSKPTNIRNEIL+ES+  SCTV+INKSEKSETQKLQYCDIQ  IIK+K
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 126 ELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGIT 185
           E A  VTVITFDIETTGFSRNLDRIVEIA QDLSGGENSTFQTLINP+CYI NS +HGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 186 NHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSFD 245
           N MV  P VPRM+ELIPI+LQFV+SR  QKP GYVLLVAHNARTFDVPFLL EFSR S D
Sbjct: 181 NRMVDSPSVPRMQELIPIILQFVKSR--QKPGGYVLLVAHNARTFDVPFLLSEFSRYSVD 240

Query: 246 IPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSLSLILQ 305
           IP NW FFD++ LARQLMK SDSKITKI+LQAL EYY I+L G AHRA+SDVR LS ILQ
Sbjct: 241 IPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ 300

Query: 306 RLTFELKLGISDLIERSFTASDLINKKK 334
           RLTF+LKL ISDL+ER+FT  DLINKKK
Sbjct: 301 RLTFDLKLDISDLVERAFTPLDLINKKK 326

[Close]

BLAST of Bhi02G001794 vs. ExPASy TrEMBL
Match: A0A0N9LRH7 (Exonuclease DPD1 OS=Cucumis sativus OX=3659 GN=DPD1 PE=2 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.0e-141
Identity = 261/328 (79.57%), Postives = 284/328 (86.59%), Query Frame = 0


Query: 6   MCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRWIRKSM 65
           MC SI RFPK+GVP LANLWRENFHPLNRN  H+ W+DQL FRIYNLEGG+NKRW RKS+
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 66  TTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQLIIKNK 125
           TTKAG KAK NPSSKPTNIRNEIL+ES+  SCTV+INKSEKSETQKLQYCDIQ  IIK+K
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 126 ELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGIT 185
           E A  VTVITFDIETTGFSRNLDRIVEIA QDLSGGENSTFQTLINP+CYI NS +HGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 186 NHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFSRCSFD 245
           N MV  P VP M+ELIPI+LQFV+SR  QKP GYVLLVAHNARTFDVPFLL EFSR S D
Sbjct: 181 NRMVDSPSVPSMQELIPIILQFVKSR--QKPGGYVLLVAHNARTFDVPFLLSEFSRYSVD 240

Query: 246 IPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSLSLILQ 305
           IP NW FFD++ LARQLMK SDSKITKI+LQAL EYY I+L G AHRA+SDVR LS ILQ
Sbjct: 241 IPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ 300

Query: 306 RLTFELKLGISDLIERSFTASDLINKKK 334
           RLTF+LKL ISDL+ER+FT  DLINKKK
Sbjct: 301 RLTFDLKLDISDLVERAFTPLDLINKKK 326

The following BLAST results are available for this feature:

BLAST of Bhi02G001794 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26940.1	1.6e-63	42.77	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G26940.2	1.6e-63	42.77	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G26940.3	1.6e-63	42.77	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G26940.4	1.6e-63	42.77	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of Bhi02G001794 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q682U6	2.3e-62	42.77	Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q895K2	1.8e-14	32.18	DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) ...	[more]
Q8XJR3	3.7e-12	31.75	DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) OX=...	[more]
Q5HPS7	7.8e-10	27.40	DNA polymerase III PolC-type OS=Staphylococcus epidermidis (strain ATCC 35984 / ...	[more]
Q8CPG6	7.8e-10	27.40	DNA polymerase III PolC-type OS=Staphylococcus epidermidis (strain ATCC 12228 / ...	[more]

BLAST of Bhi02G001794 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878496.1	6.5e-187	100.00	exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida] >XP...	[more]
XP_038878498.1	1.4e-165	98.38	exonuclease DPD1, chloroplastic/mitochondrial isoform X2 [Benincasa hispida]	[more]
KAG6590475.1	2.7e-161	88.02	Exonuclease DPD1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma s...	[more]
XP_022961373.1	1.0e-160	87.72	exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata] >XP_022961374...	[more]
XP_023515555.1	1.4e-160	87.72	exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]	[more]

BLAST of Bhi02G001794 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDU6	5.0e-161	87.72	exonuclease DPD1, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HUD7	3.3e-160	88.59	exonuclease DPD1, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1C1V8	1.8e-150	83.23	exonuclease DPD1, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0LVY3	6.8e-142	79.88	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569080...	[more]
A0A0N9LRH7	2.0e-141	79.57	Exonuclease DPD1 OS=Cucumis sativus OX=3659 GN=DPD1 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 132..313 e-value: 6.1E-27 score: 105.5
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 135..299 e-value: 8.0E-20 score: 72.0
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 131..313 e-value: 1.4E-42 score: 147.7
None	No IPR available	PANTHER	PTHR13058:SF23	POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED	coord: 4..331
None	No IPR available	CDD	cd06127	DEDDh	coord: 136..305 e-value: 8.62697E-41 score: 138.588
IPR040393	Three-prime repair exonuclease 1/2	PANTHER	PTHR13058	THREE PRIME REPAIR EXONUCLEASE 1, 2	coord: 4..331
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 132..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001794	Bhi02M001794	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000738	DNA catabolic process, exonucleolytic
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0008296	3'-5'-exodeoxyribonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008408	3'-5' exonuclease activity