Bhi02G001713 (gene) Wax gourd (B227) v1

Overview
NameBhi02G001713
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Description60S ribosomal protein L18-2
Locationchr2: 56278878 .. 56281333 (-)
RNA-Seq ExpressionBhi02G001713
SyntenyBhi02G001713
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCGGCGGCGGCTGCTAAGCTTGGAGAGCGTTGCAATGGTACCTTCTAACTCTCTTCTCTCTCCAGCTTATCGATTTTGTTTTTTCTTTGGATTTAACTTCTTCCGGTGATTAGGGGATCGATCTCGTTGCAGGAGGAAAGAGTAAGAAGACCAAGAGACTGCACCCAAATCAGATGATATCTACCTAAACTTACTCGTCAAGTTACTTATTAACCGAGATTTCTCTTTCAAATTCAGTTTTGTTTGATCTATTGGTGCTTAAATATGCTCGAATGTTTAAGGGTTGAAAACCGATTTTGAAATGTCAATCGGTTGGTTTATTGGATTTCTGAAAACGGAGTTCCGCACCGTCCTCACATTTGATGAACCTTCAACTTTTTATTTTCTTCTCTCTGCGTTGCGCTTGTCAGATCTGTTTTAAATTGCTAAGCAGTTTGTAAATGCCTATTTTTTCTCCAATGAATTGGTCTTGATGGCTGGTCTTTTTGCTTTGATGATGTTTAATAATCCCAGCTCGATGAGATCTTTTGTAGGTCGGGGAATAGTCTTATTCATTAAATATCTGAGCTTAAAGTCCAGCTTTAGAGTCTTTTCTGGATTGTCTTCTACTGCTGATGTAAATTATTGAATTTACTTCGAATTGGTTACTGTGCACCCAATTGTTAGTTCACTCGTTAACTGCATTTGCTCTTCTCCTTCTAGTTTTTGAAGATATATAAAATGCTGTGTTACCTACATTATATCCCCTTTTTGGATAGGGAATACAGACATACACCGATAAGCATAAGCTATACTTGGCTTTTTTTTTTTTTCATGTGTTTGGACGGAAAAAATGTTCCCAGTGATTGTTAACCTGACCATGCTAATGCTGATCATTTTGTGATTAAACTTTTCTTTAATTTTTCTGAGGGAACTGGCTCCAAGATTTCAAGTTTTTGTGCTCATTGGCATGTCTTGCTTTAGAGCAAGGTGGTTATGCATCTTCCGACTTCTAAAACTTAGGTCCCATTTGGTGACCTTTTGGTTTTTTTGTTTTTGAAAATTAAGCTTATGCTTTTTCCATTTCTTACAATGATTTGGAATAGTCATATTCTGGAGGTGGAGGTACCAGTGTCTATAGGACTATTTCTTAAGAACAAAAAGCTAAAAACGAAATAGTTATCAAATGAGACCTTAAATTTTATGCTTTTTAGTTTTCACTCTATCCCGGAATCTTCTAATTTTTTTCTGTTTGTGTGCAATTTGGTTATGAACTTCGTGTATATGTCAGTTAAACTGGTCATGCTGGGAGTAGAAGCTTATTGCACGTGCATTTACTTGAATAAAGTCGTTCTGTTTGCCTGCTTACACACTTACAATGTTGTGATTCTCAAGTGCTTATTTATGAGCAAGGTTAACAAGCCTCCACTTTCGCTTTCTAGGCTTATCCAGTTCATGAAAGGAAAGGTTGGTTAAATTGTGTAGTATTCTAATTTTATTTTGGTTTTTTTTTTGTATGGTTGTGCATATATGATATATTTGAAACTTTGTACATTTGTGTGTGATATGATAGGAAAGTAGATTGCCATCGCTGTTGGGACTATTACGATGATATTCATGTCTATGAAGTCCCAGCATTGAAAGTAGCAGCTCTGAGGTTTACTGAGACAGCCAGGGCAAGGATCAAAAAGGCTGGCAGGAAATGTTCGACATTTAACCAGCTTGAAAACCGATTTTGAAATGTGAATCGGTTGGTTTATTGGATTTCTGAAAACGGAGTTCCGCACTGTCCTCACATTTGATGAACCTTCAACTTTTTATTTTCTTCTCTCTGCGTTAAGCTTGTCAGATCTGTTTTAGATTGCTAAGCAGTTTGTAAATGCCTGGAAGAAATCTATTTTTGTGTAAATTCAACTACAGGAAGGACAAAAACAGAACCATTAACCGGGGACATGGAGCTTCGATAATGCCTTCACCGATGGAAGGAGCACAATTGCGGAAATCAAATTCATTTATATTCCTTTCGAATTCACTTTCAGCACTTATCTCTCGTTTGCTTTTGTAGGAAGTACGATGTGTCTGACGCAAACTCTAAAGGTGTGTTTGCAGATGTTGACATTGATGAATATGGGCAAACCGGAATGGAAACCGAGTGAAGGTGAAAGTCGTCGTGCAACAATCGCTTAAACGGGGAACAAACGTAAAGCTTGGAACCGAGGCTGAAAAGACTTGGATCCCTACAACCTATGAAGAACTCCCCTGATTTTTGTTACGTGTGTGGTAAACTTGGCCATGTGATTTAGGAATGTGATGAAACAAATGAAGGAGGGGAGGAGAAAAGATTAGGGGTATGGTTGAGGGAAACACAAGGCAACAGCTAGGG

mRNA sequence

ACCGGCGGCGGCTGCTAAGCTTGGAGAGCGTTGCAATGGAGGAAAGAGTAAGAAGACCAAGAGACTGCACCCAAATCAGATGATATCTACCTAAACTTACTCGTCAAGTTACTTATTAACCGAGATTTCTCTTTCAAATTCAGTTTTGTTTGATCTATTGGTGCTTAAATATGCTCGAATGTTTAAGGGTTGAAAACCGATTTTGAAATGTCAATCGGTTGGTTTATTGGATTTCTGAAAACGGAGTTCCGCACCGTCCTCACATTTGATGAACCTTCAACTTTTTATTTTCTTCTCTCTGCGTTGCGCTTGTCAGATCTGTTTTAAATTGCTAAGCAGTTTGTAAATGCCTATTTTTTCTCCAATGAATTGGTCTTGATGGCTGGTCTTTTTGCTTTGATGATGTTTAATAATCCCAGCTCGATGAGATCTTTTGTAGGTCGGGGAATAGTCTTATTCATTAAATATCTGAGCTTAAAGTCCAGCTTTAGAGTCTTTTCTGGATTGTCTTCTACTGCTGATGTAAATTATTGAATTTACTTCGAATTGGTTACTGTGCACCCAATTGTTAGTTCACTCGTTAACTGCATTTGCTCTTCTCCTTCTAGTTTTTGAAGATATATAAAATGCTGTGTTACCTACATTATATCCCCTTTTTGGATAGGGAATACAGACATACACCGATAAGCATAAGCTATACTTGGCTTTTTTTTTTTTTCATGTGTTTGGACGGAAAAAATGTTCCCAGTGATTGTTAACCTGACCATGCTAATGCTGATCATTTTGTGATTAAACTTTTCTTTAATTTTTCTGAGGGAACTGGCTCCAAGATTTCAAGTTTTTGTGCTCATTGGCATGTCTTGCTTTAGAGCAAGGTGGTTATGCATCTTCCGACTTCTAAAACTTAGGTCCCATTTGGTGACCTTTTGGTTTTTTTGTTTTTGAAAATTAAGCTTATGCTTTTTCCATTTCTTACAATGATTTGGAATAGTCATATTCTGGAGGTGGAGGTACCAGTGTCTATAGGACTATTTCTTAAGAACAAAAAGCTAAAAACGAAATAGTTATCAAATGAGACCTTAAATTTTATGCTTTTTAGTTTTCACTCTATCCCGGAATCTTCTAATTTTTTTCTGTTTGTGTGCAATTTGGTTATGAACTTCGTGTATATGTCAGTTAAACTGGTCATGCTGGGAGTAGAAGCTTATTGCACGTGCATTTACTTGAATAAAGTCGTTCTGTTTGCCTGCTTACACACTTACAATGTTGTGATTCTCAAGTGCTTATTTATGAGCAAGGTTAACAAGCCTCCACTTTCGCTTTCTAGGCTTATCCAGTTCATGAAAGGAAAGGAAAGTAGATTGCCATCGCTGTTGGGACTATTACGATGATATTCATGTCTATGAAGTCCCAGCATTGAAAGTAGCAGCTCTGAGGTTTACTGAGACAGCCAGGGCAAGGATCAAAAAGGCTGGCAGGAAATGTTCGACATTTAACCAGCTTGAAAACCGATTTTGAAATGTGAATCGGTTGGTTTATTGGATTTCTGAAAACGGAGTTCCGCACTGTCCTCACATTTGATGAACCTTCAACTTTTTATTTTCTTCTCTCTGCGTTAAGCTTGTCAGATCTGTTTTAGATTGCTAAGCAGTTTGTAAATGCCTGGAAGAAATCTATTTTTGTGTAAATTCAACTACAGGAAGGACAAAAACAGAACCATTAACCGGGGACATGGAGCTTCGATAATGCCTTCACCGATGGAAGGAGCACAATTGCGGAAATCAAATTCATTTATATTCCTTTCGAATTCACTTTCAGCACTTATCTCTCGTTTGCTTTTGTAGGAAGTACGATGTGTCTGACGCAAACTCTAAAGGTGTGTTTGCAGATGTTGACATTGATGAATATGGGCAAACCGGAATGGAAACCGAGTGAAGGTGAAAGTCGTCGTGCAACAATCGCTTAAACGGGGAACAAACGTAAAGCTTGGAACCGAGGCTGAAAAGACTTGGATCCCTACAACCTATGAAGAACTCCCCTGATTTTTGTTACGTGTGTGGTAAACTTGGCCATGTGATTTAGGAATGTGATGAAACAAATGAAGGAGGGGAGGAGAAAAGATTAGGGGTATGGTTGAGGGAAACACAAGGCAACAGCTAGGG

Coding sequence (CDS)

ATGCTTTTTAGTTTTCACTCTATCCCGGAATCTTCTAATTTTTTTCTGTTTGTGTGCAATTTGGTTATGAACTTCGTGTATATGTCAGTTAAACTGGTCATGCTGGGAGTAGAAGCTTATTGCACGTGCATTTACTTGAATAAAGTCGTTCTGTTTGCCTGCTTACACACTTACAATGTTGTGATTCTCAAGTGCTTATTTATGAGCAAGGTTAACAAGCCTCCACTTTCGCTTTCTAGGCTTATCCAGTTCATGAAAGGAAAGGAAAGTAGATTGCCATCGCTGTTGGGACTATTACGATGA

Protein sequence

MLFSFHSIPESSNFFLFVCNLVMNFVYMSVKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLLR
Homology
[Close]
BLAST of Bhi02G001713 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 )

HSP 1 Score: 53.1 bits (126), Expect = 1.5e-07
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMSKVNK PLSLSRL++FM GKE ++  L+G +
Sbjct: 44  FNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTI 85

[Close]
BLAST of Bhi02G001713 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.5e-07
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMSKVNK PLSLSRL++FM GK+ ++  L+G +
Sbjct: 44  FNAVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTI 85

[Close]
BLAST of Bhi02G001713 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.2e-07
Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 58 YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLG 98
          +N VILK LFMSKVN+PPLSLSRLI++M+GKE ++  ++G
Sbjct: 41 FNAVILKRLFMSKVNRPPLSLSRLIKYMQGKEGKIGVVVG 80

[Close]
BLAST of Bhi02G001713 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-06
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMSKVNK PLSLSRL++FM GKE ++  L+G +
Sbjct: 44  FNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTI 85

[Close]
BLAST of Bhi02G001713 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-06
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMSKVNK PLSLSRL++FM GK+ ++  L+G +
Sbjct: 44  FNAVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTI 85

[Close]
BLAST of Bhi02G001713 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3)

HSP 1 Score: 50.8 bits (120), Expect = 1.0e-05
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 58 YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLG 98
          +N VILK LFMSKVNK PLSLSRL+++M GK+ ++  ++G
Sbjct: 44 FNAVILKRLFMSKVNKAPLSLSRLVRYMDGKDGKIAVIVG 83

[Close]
BLAST of Bhi02G001713 vs. ExPASy Swiss-Prot
Match: D0VWQ3 (Ribosomal protein L18 OS=Canis lupus familiaris OX=9615 GN=RPL18 PE=1 SV=2)

HSP 1 Score: 44.3 bits (103), Expect = 9.5e-04
Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 57  TYNVVILKCLFMSKVNKPPLSLSRLIQFMK--GKESRLPSLLGLL 100
           T+N V+LK LFMS+ N+PPLSLSR+I+ MK  G+E++   ++G +
Sbjct: 42  TFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTI 86

[Close]
BLAST of Bhi02G001713 vs. NCBI nr
Match: XP_038878459.1 (uncharacterized protein LOC120070688 [Benincasa hispida])

HSP 1 Score: 137.1 bits (344), Expect = 8.2e-29
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 29  SVKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKCLFMSKVNKPPLSLSRLIQFMKGK 88
           +VKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKCLFMSKVNKPPLSLSRLIQFMKGK
Sbjct: 35  NVKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKCLFMSKVNKPPLSLSRLIQFMKGK 94

Query: 89  ESRLPSLLGLLR 101
           ESRLPSLLGLLR
Sbjct: 95  ESRLPSLLGLLR 106

[Close]
BLAST of Bhi02G001713 vs. NCBI nr
Match: XP_038878458.1 (uncharacterized protein LOC120070687 [Benincasa hispida])

HSP 1 Score: 110.2 bits (274), Expect = 1.1e-20
Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 0 

Query: 29 SVKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKCLFMSKVNKPPLSLSRLIQFMKGK 88
          +VKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILK LFMSKVNKPPLSLSRLI FMKGK
Sbjct: 35 NVKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKRLFMSKVNKPPLSLSRLIHFMKGK 94

[Close]
BLAST of Bhi02G001713 vs. NCBI nr
Match: XP_008450608.1 (PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo] >KAA0050917.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa] >TYK10265.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 4.4e-06
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMSKVNKPPLSLSRLIQFMKGKES++  ++G +
Sbjct: 44  FNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTI 85

[Close]
BLAST of Bhi02G001713 vs. NCBI nr
Match: XP_038887726.1 (60S ribosomal protein L18-2-like [Benincasa hispida])

HSP 1 Score: 61.6 bits (148), Expect = 4.4e-06
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMSKVNKPPLSLSRLIQFMKGKES++  ++G +
Sbjct: 44  FNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTI 85

[Close]
BLAST of Bhi02G001713 vs. NCBI nr
Match: XP_023531430.1 (60S ribosomal protein L18-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 60.5 bits (145), Expect = 9.8e-06
Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMS+VNKPPLSLSRLIQFMKGKES++  ++G +
Sbjct: 71  FNAVILKRLFMSRVNKPPLSLSRLIQFMKGKESKIAVVVGTI 112

[Close]
BLAST of Bhi02G001713 vs. ExPASy TrEMBL
Match: A0A5A7U942 (60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004150 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-06
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMSKVNKPPLSLSRLIQFMKGKES++  ++G +
Sbjct: 44  FNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTI 85

[Close]
BLAST of Bhi02G001713 vs. ExPASy TrEMBL
Match: A0A1S3BPL9 (60S ribosomal protein L18-2 OS=Cucumis melo OX=3656 GN=LOC103492145 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-06
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMSKVNKPPLSLSRLIQFMKGKES++  ++G +
Sbjct: 44  FNAVILKRLFMSKVNKPPLSLSRLIQFMKGKESKIAVVVGTI 85

[Close]
BLAST of Bhi02G001713 vs. ExPASy TrEMBL
Match: A0A6J1I1I5 (60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111469018 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.7e-06
Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMS+VNKPPLSLSRLIQFMKGKES++  ++G +
Sbjct: 71  FNAVILKRLFMSRVNKPPLSLSRLIQFMKGKESKIAVVVGTI 112

[Close]
BLAST of Bhi02G001713 vs. ExPASy TrEMBL
Match: A0A6J1EUD5 (60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437842 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.7e-06
Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 58  YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLGLL 100
           +N VILK LFMS+VNKPPLSLSRLIQFMKGKES++  ++G +
Sbjct: 44  FNAVILKRLFMSRVNKPPLSLSRLIQFMKGKESKIAVVVGTI 85

[Close]
BLAST of Bhi02G001713 vs. ExPASy TrEMBL
Match: A0A6P3ZBV2 (60S ribosomal protein L18-2 OS=Ziziphus jujuba OX=326968 GN=LOC107411877 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.2e-06
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 58 YNVVILKCLFMSKVNKPPLSLSRLIQFMKGKESRLPSLLG 98
          +N VILK LFMSKVNKPPLSLSRLI+FMKGKES++  ++G
Sbjct: 44 FNAVILKRLFMSKVNKPPLSLSRLIRFMKGKESKIAVVVG 83

The following BLAST results are available for this feature:
BLAST of Bhi02G001713 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05590.11.5e-0764.29ribosomal protein L18 [more]
AT5G27850.11.5e-0761.90Ribosomal protein L18e/L15 superfamily protein [more]
BLAST of Bhi02G001713 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O657299.2e-0765.0060S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV... [more]
P427912.0e-0664.2960S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2[more]
Q940B02.0e-0661.9060S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1[more]
O222541.0e-0560.00Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A P... [more]
D0VWQ39.5e-0451.11Ribosomal protein L18 OS=Canis lupus familiaris OX=9615 GN=RPL18 PE=1 SV=2[more]
BLAST of Bhi02G001713 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038878459.18.2e-2998.61uncharacterized protein LOC120070688 [Benincasa hispida][more]
XP_038878458.11.1e-2095.00uncharacterized protein LOC120070687 [Benincasa hispida][more]
XP_008450608.14.4e-0673.81PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo] >KAA0050917.1 60S ribosoma... [more]
XP_038887726.14.4e-0673.8160S ribosomal protein L18-2-like [Benincasa hispida][more]
XP_023531430.19.8e-0671.4360S ribosomal protein L18-2-like [Cucurbita pepo subsp. pepo][more]
BLAST of Bhi02G001713 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U9422.1e-0673.8160S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3BPL92.1e-0673.8160S ribosomal protein L18-2 OS=Cucumis melo OX=3656 GN=LOC103492145 PE=3 SV=1[more]
A0A6J1I1I54.7e-0671.4360S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111469018 PE=3 SV=... [more]
A0A6J1EUD54.7e-0671.4360S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437842 P... [more]
A0A6P3ZBV26.2e-0675.0060S ribosomal protein L18-2 OS=Ziziphus jujuba OX=326968 GN=LOC107411877 PE=3 SV... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.100.10.10coord: 45..97
e-value: 3.2E-8
score: 35.3
IPR021131Ribosomal protein L18e/L15PPFAMPF17135Ribosomal_L18coord: 57..89
e-value: 3.5E-8
score: 33.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001713Bhi02M001713mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome