Bhi02G001629 (gene) Wax gourd (B227) v1

Overview


Name	Bhi02G001629
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	CCHC-type domain-containing protein
Location	chr2: 52886855 .. 52887128 (-)
RNA-Seq Expression	Bhi02G001629
Synteny	Bhi02G001629

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCAAGTTTAATGGGCAGAACTATGATGATTGGATCAAATATGTCAACTTAAATGCTGGCTTTTTGGGACTCAATTCAGCTCTAGTTATGGATGAGTCCACTAAACTGATTAATATTAGTTCGGAGGTAGACAAGAAACTGTGGGAGAACTGGGAAAGGTCGAATAAGCTTTTGATGAGCTTTCTTATGTTTAGTATAGCATCTAGTATTAAGCCTTCCCAGCCCAAGACTGAAAAAGTGAGAGAAATTTTGGCTGAAATTAAGAAATATTAT

mRNA sequence

TATCAAGTTTAATGGGCAGAACTATGATGATTGGATCAAATATGTCAACTTAAATGCTGGCTTTTTGGGACTCAATTCAGCTCTAGTTATGGATGAGTCCACTAAACTGATTAATATTAGTTCGGAGGTAGACAAGAAACTGTGGGAGAACTGGGAAAGGTCGAATAAGCTTTTGATGAGCTTTCTTATGTTTAGTATAGCATCTAGTATTAAGCCTTCCCAGCCCAAGACTGAAAAAGTGAGAGAAATTTTGGCTGAAATTAAGAAATATTAT

Coding sequence (CDS)

TATCAAGTTTAATGGGCAGAACTATGATGATTGGATCAAATATGTCAACTTAAATGCTGGCTTTTTGGGACTCAATTCAGCTCTAGTTATGGATGAGTCCACTAAACTGATTAATATTAGTTCGGAGGTAGACAAGAAACTGTGGGAGAACTGGGAAAGGTCGAATAAGCTTTTGATGAGCTTTCTTATGTTTAGTATAGCATCTAGTATTAAGCCTTCCCAGCCCAAGACTGAAAAAGTGAGAGAAATTTTGGCTGAAATTAAGAAATATTAT

Protein sequence

IKFNGQNYDDWIKYVNLNAGFLGLNSALVMDESTKLINISSEVDKKLWENWERSNKLLMSFLMFSIASSIKPSQPKTEKVREILAEIKKYY

Homology

[Close]

BLAST of Bhi02G001629 vs. NCBI nr
Match: KAE8707246.1 (hypothetical protein F3Y22_tig00110384pilonHSYRG00078 [Hibiscus syriacus])

HSP 1 Score: 125.2 bits (313), Expect = 2.9e-25
Identity = 63/89 (70.79%), Postives = 70/89 (78.65%), Query Frame = 0


Query: 1   IKFNGQNYDDWIKYVNLNAGFLGLNSALVMDESTKLINISSEVDKKLWENWERSNKLLMS 60
           IKFNGQ YDDWI+YV LN   LGLN ALVMDE TKLI+ S + DKKLWENWER N  +MS
Sbjct: 121 IKFNGQIYDDWIEYVKLNVELLGLNLALVMDEPTKLIDTSMKADKKLWENWERLNS-MMS 180

Query: 61  FLMFSIASSIKPSQPKTEKVREILAEIKK 90
           FL  SIA +IKPSQPKTE VR+ + EIKK
Sbjct: 181 FLKLSIAPNIKPSQPKTENVRDFVVEIKK 208

[Close]

BLAST of Bhi02G001629 vs. NCBI nr
Match: KAE8728730.1 (hypothetical protein F3Y22_tig00004072pilonHSYRG00021 [Hibiscus syriacus])

HSP 1 Score: 117.9 bits (294), Expect = 4.7e-23
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 1  IKFNGQNYDDWIKYVNLNAGFLGLNSALVMDESTKLINISSEVDKKLWENWERSNKLLMS 60
          IKFNGQ YDDWIKYV LN G LGL+  +VM+E TK  +  SE +KKLWENWER N+L+M 
Sbjct: 9  IKFNGQKYDDWIKYVKLNVGLLGLDLDIVMEEPTKPTDTCSEANKKLWENWERLNRLMMC 68

Query: 61 FLMFSIASSIKPSQPKTEKVREILAEIKK 90
          FL  SIA +IK S PKTE VRE + +IKK
Sbjct: 69 FLKLSIAPNIKLSHPKTENVREFVPKIKK 97

[Close]

BLAST of Bhi02G001629 vs. NCBI nr
Match: KAE8665748.1 (hypothetical protein F3Y22_tig00112530pilonHSYRG00240 [Hibiscus syriacus])

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-22
Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 7   NYDDWIKYVNLNAGFLGLNSALVMDESTKLINISSEVDKKLWENWERSNKLLMSFLMFSI 66
           N DDWI+YV LNAG LGL+ A+VM+E TKL + S E DKKLWENWERSN+L+MSFL  SI
Sbjct: 164 NCDDWIEYVKLNAGLLGLDLAIVMNEPTKLTDTSPEADKKLWENWERSNRLMMSFLKLSI 223

Query: 67  ASSIKPSQPKTEKVREILAEIKK 90
             +I  SQPKTE VR+ +AEIKK
Sbjct: 224 VPNINLSQPKTENVRDFVAEIKK 246

[Close]

BLAST of Bhi02G001629 vs. NCBI nr
Match: KAF9660576.1 (hypothetical protein SADUNF_SadunfUnG0010900 [Salix dunnii])

HSP 1 Score: 90.9 bits (224), Expect = 6.2e-15
Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 1   IKFNGQNYDDWIKYVNLNAGFLGLNSALVMDESTKLI-NISSEVDKKLWENWERSNKLLM 60
           +KFNG NY++W + +  + G + L+ A++ DE    I N SSE++K  +E WERSN+L +
Sbjct: 37  VKFNGLNYEEWSEQIRFSLGVMSLDQAIITDEEPAAITNESSELEKSRYETWERSNRLCL 96

Query: 61  SFLMFSIASSIKPSQPKTEKVREILAEIKK 90
           + L  S+A SIKPS PKTEK RE + +IK+
Sbjct: 97  NLLRMSMAESIKPSMPKTEKAREFILKIKE 126

[Close]

BLAST of Bhi02G001629 vs. NCBI nr
Match: KAF1879111.1 (hypothetical protein Lal_00047783 [Lupinus albus])

HSP 1 Score: 90.5 bits (223), Expect = 8.0e-15
Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 1   IKFNGQNYDDWIKYVNLNAGFLGLNSALVMDESTKLINISSEVDKKLWENWERSNKLLMS 60
           +KFNG NY DW + +  + G + L+ A++MD    +   SSE DK L+E WERSN+L +S
Sbjct: 15  VKFNGLNYADWSEQIQFSLGVMELDLAIIMDNVPTITETSSEADKTLYEAWERSNRLSLS 74

Query: 61  FLMFSIASSIKPSQPKTEKVREILAEIKKY 91
            +  SI+ ++KPS PKT+  RE +  IK+Y
Sbjct: 75  LMKMSISDNVKPSMPKTDNAREFMRMIKEY 104

[Close]

BLAST of Bhi02G001629 vs. ExPASy TrEMBL
Match: A0A6A3ASJ6 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110384pilonHSYRG00078 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25
Identity = 63/89 (70.79%), Postives = 70/89 (78.65%), Query Frame = 0


Query: 1   IKFNGQNYDDWIKYVNLNAGFLGLNSALVMDESTKLINISSEVDKKLWENWERSNKLLMS 60
           IKFNGQ YDDWI+YV LN   LGLN ALVMDE TKLI+ S + DKKLWENWER N  +MS
Sbjct: 121 IKFNGQIYDDWIEYVKLNVELLGLNLALVMDEPTKLIDTSMKADKKLWENWERLNS-MMS 180

Query: 61  FLMFSIASSIKPSQPKTEKVREILAEIKK 90
           FL  SIA +IKPSQPKTE VR+ + EIKK
Sbjct: 181 FLKLSIAPNIKPSQPKTENVRDFVVEIKK 208

[Close]

BLAST of Bhi02G001629 vs. ExPASy TrEMBL
Match: A0A6A3CHG6 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00004072pilonHSYRG00021 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-23
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 1  IKFNGQNYDDWIKYVNLNAGFLGLNSALVMDESTKLINISSEVDKKLWENWERSNKLLMS 60
          IKFNGQ YDDWIKYV LN G LGL+  +VM+E TK  +  SE +KKLWENWER N+L+M 
Sbjct: 9  IKFNGQKYDDWIKYVKLNVGLLGLDLDIVMEEPTKPTDTCSEANKKLWENWERLNRLMMC 68

Query: 61 FLMFSIASSIKPSQPKTEKVREILAEIKK 90
          FL  SIA +IK S PKTE VRE + +IKK
Sbjct: 69 FLKLSIAPNIKLSHPKTENVREFVPKIKK 97

[Close]

BLAST of Bhi02G001629 vs. ExPASy TrEMBL
Match: A0A6A2WWC2 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112530pilonHSYRG00240 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 7   NYDDWIKYVNLNAGFLGLNSALVMDESTKLINISSEVDKKLWENWERSNKLLMSFLMFSI 66
           N DDWI+YV LNAG LGL+ A+VM+E TKL + S E DKKLWENWERSN+L+MSFL  SI
Sbjct: 164 NCDDWIEYVKLNAGLLGLDLAIVMNEPTKLTDTSPEADKKLWENWERSNRLMMSFLKLSI 223

Query: 67  ASSIKPSQPKTEKVREILAEIKK 90
             +I  SQPKTE VR+ +AEIKK
Sbjct: 224 VPNINLSQPKTENVRDFVAEIKK 246

[Close]

BLAST of Bhi02G001629 vs. ExPASy TrEMBL
Match: A0A6A5MVH0 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00047783 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.9e-15
Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 1   IKFNGQNYDDWIKYVNLNAGFLGLNSALVMDESTKLINISSEVDKKLWENWERSNKLLMS 60
           +KFNG NY DW + +  + G + L+ A++MD    +   SSE DK L+E WERSN+L +S
Sbjct: 15  VKFNGLNYADWSEQIQFSLGVMELDLAIIMDNVPTITETSSEADKTLYEAWERSNRLSLS 74

Query: 61  FLMFSIASSIKPSQPKTEKVREILAEIKKY 91
            +  SI+ ++KPS PKT+  RE +  IK+Y
Sbjct: 75  LMKMSISDNVKPSMPKTDNAREFMRMIKEY 104

[Close]

BLAST of Bhi02G001629 vs. ExPASy TrEMBL
Match: A0A6N2L2G7 (CCHC-type domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS155875 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.9e-14
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 1   IKFNGQNYDDWIKYVNLNAGFLGLNSALVMDESTKLI-NISSEVDKKLWENWERSNKLLM 60
           +KFNG NY++W + +  + G + L+ A++ DE    I + SSE++K  +E WERSN+L +
Sbjct: 31  VKFNGLNYEEWSEQIRFSLGVMSLDQAILTDEELAAITDESSELEKSRYETWERSNRLCL 90

Query: 61  SFLMFSIASSIKPSQPKTEKVREILAEIK 89
           + L  S+A SIKPS PKTEK RE + +IK
Sbjct: 91  NLLRMSMAESIKPSMPKTEKAREFILKIK 119

The following BLAST results are available for this feature:

BLAST of Bhi02G001629 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi02G001629 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi02G001629 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8707246.1	2.9e-25	70.79	hypothetical protein F3Y22_tig00110384pilonHSYRG00078 [Hibiscus syriacus]	[more]
KAE8728730.1	4.7e-23	64.04	hypothetical protein F3Y22_tig00004072pilonHSYRG00021 [Hibiscus syriacus]	[more]
KAE8665748.1	2.3e-22	67.47	hypothetical protein F3Y22_tig00112530pilonHSYRG00240 [Hibiscus syriacus]	[more]
KAF9660576.1	6.2e-15	46.67	hypothetical protein SADUNF_SadunfUnG0010900 [Salix dunnii]	[more]
KAF1879111.1	8.0e-15	44.44	hypothetical protein Lal_00047783 [Lupinus albus]	[more]

BLAST of Bhi02G001629 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A3ASJ6	1.4e-25	70.79	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110384pilon...	[more]
A0A6A3CHG6	2.3e-23	64.04	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00004072pilon...	[more]
A0A6A2WWC2	1.1e-22	67.47	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112530pilon...	[more]
A0A6A5MVH0	3.9e-15	44.44	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00047783 PE=4 SV=1	[more]
A0A6N2L2G7	1.9e-14	46.07	CCHC-type domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS155...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35317:SF4	SUBFAMILY NOT NAMED	coord: 4..91
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 4..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001629	Bhi02M001629	mRNA