Bhi02G001620 (gene) Wax gourd (B227) v1

Overview
NameBhi02G001620
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionProgrammed cell death protein 4-like
Locationchr2: 52577071 .. 52579063 (+)
RNA-Seq ExpressionBhi02G001620
SyntenyBhi02G001620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTGTTTTAAAATATAAATTAAAAATTATATTATATTATATCTTAAAAATTATGTAAACATGAAGGACAAAATTGTACTTTTAACCAAAAGATATTATCCGGTCATACAAATCTAGCATACGCTTGAGAGTAGAGGAACATTTCTACCGTAAACCATGGCGTTCTTATCCGCTTGAAACGAATCAGTAAAAACCACACATCAGCACAAACGCCCACAGATCGCGTGATCTCACTCGGTCGGTCCTTTGTATAAAATGGTACTTCGCTTCAATCTTCACTCACACTCATCCATTGAGAAAGAATCGAATCGGCGATAACGAGATGAAGAAGTCAGAGAAGAGCTCGAAGCCCAGCGGAAAATCCGATGCGAGGAAGGATCGCAAATCGGCGACGGGAATGAACGGATCACCGAAGAAAGGAGGCCACGGCGGCAAGTTCACTTGGGCGGGAGACGGTTACTCTCCGGCCGAGATCGGGTTCAAGGCTGAAGTTATGGACGTGAAGGACCCTAACTTTGAAGATCTGGATGAACCGGTGGCGATTTGATTACGAGGATGGCGTATTAGGTCATTTCGTGTCTGAGATTTGTAAATAGTCGTCGTCTTCATGGACGGTAATCCGTGGTTTTCCATTTCAATAAAATCACGCATCTTGTGTATAGCTTATTGATATTTTGAAATTTCAATGTGGAGCTTTGTTTCTTTTGTGTTGGACGGTGTTTGAGGTATGAAGAAAAATGGAAAAACAGAGGGAAAATGTTTATGCGTAAGCGTACCTCAGAGATCTCTGCAAATTTACCTTCGTCTCTTCAGTAATTGATGGCGGTAATGAGGTTTTTGGGTTTACTTGTTTCAATTTGTTTCGATCTGATTTGTAATGGTTATTATGATTTATGATGAGCGGAAGATTAAAGAATGGGAATGCGTGAGGGTTACGCTGTGGATCGCGAGAAAGGAGTTTCGTTTTTTGTTTTTTTTCTTTTTTAATTGTTATTGTTTTGTTAGGGTTGTTTTTCTTGGTCAAACGATTTTGTGCTTGGAGATCACGGTGGAATTCAAACTCAACTGTTCTGTTCAAGATAGTTCTTGACGTGTGTATTTCGATCTGCGATACGAGTCTGTGAGCTAATAGGTGTTGGGGATGGGAGAAGAAAATTTAAGATGGGACTGTTTCGAAATTTTTGTACCAATGATCTAATAATGCTATTAACTTGGCAAAAATCTATGTCACCCCAATCGGGGTGAGGAATCCCCGGTTTGATCGGGATGGATCAAACGGGGTATTCGATTAGGACGGTGCAGGGACTTGGTATCCCGTCTTCGAAGACCCGAGCAAAAAGTGACTAAGCATGAGTTTTTTAATATTTTACCATTTTTCATCTATATATGCAATTATTTTATCTTTATACTACAATATATTTTATTGACAAAATTGGGGTAGTGAAATCGTGTATGAGATACACGTGTGGCAAAACTCGTGTTGGTTGACTAGTCAGATACAAACTTTTTAAGGTGTGTTGACTAATTATTATTTTTTAATGGGAGATGTATAACAATATTAAGACTTTAGGAATGGGTCAACAAATTCCTTTATTATTAAACTTAATTATATATTTAATCAGAATGAAAACATAATTATATTGCATTCATATTTAAAAAAATGTCATGATATTCAAAAATATTTACAATTAATTCTTTAATTTACAATTTGAAAATGTAAAATTAAATGAAATTTAAAAACGACCCCTAGTCCTTACCCCTCACCGTCTTTGTGTCCCTCTAAATTAGGTTTACTGATACATTAAACCCAAGTCTGGTAAGTTGTTTGAATATTGTTAAACATCGCTAGTAAAATTATTGTGTACAATCCAAAAAATAAATATTAAACAATATTCATATAATATATATGGAAAATGTCTGATTTTAAATCTCTTGTCATGTGGTAATAGTAAGCGTCGTTAGATGTGATGCCTCATGATTTAATTGTACCATG

mRNA sequence

TATTGTTTTAAAATATAAATTAAAAATTATATTATATTATATCTTAAAAATTATGTAAACATGAAGGACAAAATTGTACTTTTAACCAAAAGATATTATCCGGTCATACAAATCTAGCATACGCTTGAGAGTAGAGGAACATTTCTACCGTAAACCATGGCGTTCTTATCCGCTTGAAACGAATCAGTAAAAACCACACATCAGCACAAACGCCCACAGATCGCGTGATCTCACTCGGTCGGTCCTTTGTATAAAATGGTACTTCGCTTCAATCTTCACTCACACTCATCCATTGAGAAAGAATCGAATCGGCGATAACGAGATGAAGAAGTCAGAGAAGAGCTCGAAGCCCAGCGGAAAATCCGATGCGAGGAAGGATCGCAAATCGGCGACGGGAATGAACGGATCACCGAAGAAAGGAGGCCACGGCGGCAAGTTCACTTGGGCGGGAGACGGTTACTCTCCGGCCGAGATCGGGTTCAAGGCTGAAGTTATGGACGTGAAGGACCCTAACTTTGAAGATCTGGATGAACCGGTGGCGATTTGATTACGAGGATGGCGTATTAGGTCATTTCGTGTCTGAGATTTGTAAATAGTCGTCGTCTTCATGGACGGTAATCCGTGGTTTTCCATTTCAATAAAATCACGCATCTTGTGTATAGCTTATTGATATTTTGAAATTTCAATGTGGAGCTTTGTTTCTTTTGTGTTGGACGGTGTTTGAGGTATGAAGAAAAATGGAAAAACAGAGGGAAAATGTTTATGCGTAAGCGTACCTCAGAGATCTCTGCAAATTTACCTTCGTCTCTTCAGTAATTGATGGCGGTAATGAGGTTTTTGGGTTTACTTGTTTCAATTTGTTTCGATCTGATTTGTAATGGTTATTATGATTTATGATGAGCGGAAGATTAAAGAATGGGAATGCGTGAGGGTTACGCTGTGGATCGCGAGAAAGGAGTTTCGTTTTTTGTTTTTTTTCTTTTTTAATTGTTATTGTTTTGTTAGGGTTGTTTTTCTTGGTCAAACGATTTTGTGCTTGGAGATCACGGTGGAATTCAAACTCAACTGTTCTGTTCAAGATAGTTCTTGACGTGTGTATTTCGATCTGCGATACGAGTCTGTGAGCTAATAGGTGTTGGGGATGGGAGAAGAAAATTTAAGATGGGACTGTTTCGAAATTTTTGTACCAATGATCTAATAATGCTATTAACTTGGCAAAAATCTATGTCACCCCAATCGGGGTGAGGAATCCCCGGTTTGATCGGGATGGATCAAACGGGGTATTCGATTAGGACGGTGCAGGGACTTGGTATCCCGTCTTCGAAGACCCGAGCAAAAAGTGACTAAGCATGAGTTTTTTAATATTTTACCATTTTTCATCTATATATGCAATTATTTTATCTTTATACTACAATATATTTTATTGACAAAATTGGGGTAGTGAAATCGTGTATGAGATACACGTGTGGCAAAACTCGTGTTGGTTGACTAGTCAGATACAAACTTTTTAAGGTGTGTTGACTAATTATTATTTTTTAATGGGAGATGTATAACAATATTAAGACTTTAGGAATGGGTCAACAAATTCCTTTATTATTAAACTTAATTATATATTTAATCAGAATGAAAACATAATTATATTGCATTCATATTTAAAAAAATGTCATGATATTCAAAAATATTTACAATTAATTCTTTAATTTACAATTTGAAAATGTAAAATTAAATGAAATTTAAAAACGACCCCTAGTCCTTACCCCTCACCGTCTTTGTGTCCCTCTAAATTAGGTTTACTGATACATTAAACCCAAGTCTGGTAAGTTGTTTGAATATTGTTAAACATCGCTAGTAAAATTATTGTGTACAATCCAAAAAATAAATATTAAACAATATTCATATAATATATATGGAAAATGTCTGATTTTAAATCTCTTGTCATGTGGTAATAGTAAGCGTCGTTAGATGTGATGCCTCATGATTTAATTGTACCATG

Coding sequence (CDS)

ATGAAGAAGTCAGAGAAGAGCTCGAAGCCCAGCGGAAAATCCGATGCGAGGAAGGATCGCAAATCGGCGACGGGAATGAACGGATCACCGAAGAAAGGAGGCCACGGCGGCAAGTTCACTTGGGCGGGAGACGGTTACTCTCCGGCCGAGATCGGGTTCAAGGCTGAAGTTATGGACGTGAAGGACCCTAACTTTGAAGATCTGGATGAACCGGTGGCGATTTGA

Protein sequence

MKKSEKSSKPSGKSDARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDLDEPVAI
Homology
BLAST of Bhi02G001620 vs. NCBI nr
Match: TYK10141.1 (programmed cell death protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 133.7 bits (335), Expect = 6.7e-28
Identity = 67/74 (90.54%), Postives = 72/74 (97.30%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKSDARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDV 60
          MKKSEKSSKP+GKS+ RKDRKSATGMNGSPKKGGHGGKFTW+GDGYSPAEIGFKAEVMDV
Sbjct: 1  MKKSEKSSKPTGKSEVRKDRKSATGMNGSPKKGGHGGKFTWSGDGYSPAEIGFKAEVMDV 60

Query: 61 KDPNFEDLDEPVAI 75
          KDPNFEDL+E VA+
Sbjct: 61 KDPNFEDLEEAVAV 74

BLAST of Bhi02G001620 vs. NCBI nr
Match: KAG6588005.1 (hypothetical protein SDJN03_16570, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021899.1 hypothetical protein SDJN02_15627, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122.5 bits (306), Expect = 1.6e-24
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKSDARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDV 60
          MKK EKS KPSGKSD RKDRKSATGM+GSPKKGGHGGKFTWAGDGYSPAEI F+AE MDV
Sbjct: 1  MKKPEKSLKPSGKSDVRKDRKSATGMSGSPKKGGHGGKFTWAGDGYSPAEISFRAEDMDV 60

Query: 61 KDPNFEDLDEPVAI 75
          KDPNFED +E VA+
Sbjct: 61 KDPNFEDPEEAVAV 74

BLAST of Bhi02G001620 vs. NCBI nr
Match: KAE8653402.1 (hypothetical protein Csa_007013 [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-20
Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKSDARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMD 60
          MKKSEKSSKPSGKS+ RKDRKSATGMNGSPKKGGHGGKFTW+GDGYSPAEIGFKAEVMD
Sbjct: 1  MKKSEKSSKPSGKSEVRKDRKSATGMNGSPKKGGHGGKFTWSGDGYSPAEIGFKAEVMD 59

BLAST of Bhi02G001620 vs. NCBI nr
Match: MBA0854349.1 (hypothetical protein [Gossypium schwendimanii])

HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20
Identity = 59/80 (73.75%), Postives = 65/80 (81.25%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKS------DARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFK 60
          MK S KSSK +GKS      DARKDRKS TGM+GSPKKGGHGGK+TWAGDG SPAEIGF+
Sbjct: 1  MKNSGKSSKGNGKSSSSSAADARKDRKSGTGMSGSPKKGGHGGKYTWAGDGLSPAEIGFE 60

Query: 61 AEVMDVKDPNFEDLDEPVAI 75
           EV+DVKDPNFED DE V +
Sbjct: 61 KEVIDVKDPNFEDADEIVTV 80

BLAST of Bhi02G001620 vs. NCBI nr
Match: EOY30624.1 (Uncharacterized protein TCM_037765 [Theobroma cacao])

HSP 1 Score: 107.5 bits (267), Expect = 5.2e-20
Identity = 56/72 (77.78%), Postives = 61/72 (84.72%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKSDARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDV 60
          MK + KSSK +GKSD RKDRKS TGM+GSPKKGGHGGK+TW GDG SPAEIGF  EV+DV
Sbjct: 1  MKNAGKSSKGNGKSDVRKDRKSGTGMSGSPKKGGHGGKYTWVGDGLSPAEIGFDKEVVDV 60

Query: 61 KDPNFEDLDEPV 73
          KDPNFED DE V
Sbjct: 61 KDPNFEDPDEIV 72

BLAST of Bhi02G001620 vs. ExPASy TrEMBL
Match: A0A5D3CE82 (Programmed cell death protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002840 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.3e-28
Identity = 67/74 (90.54%), Postives = 72/74 (97.30%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKSDARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDV 60
          MKKSEKSSKP+GKS+ RKDRKSATGMNGSPKKGGHGGKFTW+GDGYSPAEIGFKAEVMDV
Sbjct: 1  MKKSEKSSKPTGKSEVRKDRKSATGMNGSPKKGGHGGKFTWSGDGYSPAEIGFKAEVMDV 60

Query: 61 KDPNFEDLDEPVAI 75
          KDPNFEDL+E VA+
Sbjct: 61 KDPNFEDLEEAVAV 74

BLAST of Bhi02G001620 vs. ExPASy TrEMBL
Match: A0A0A0LWP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575040 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKSDARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDV 60
          MKKSEKSSKPSGKS+ RKDRKSATGMNGSPKKGGHGGKFTW+GDGYSPAEIGFKAEVMDV
Sbjct: 1  MKKSEKSSKPSGKSEVRKDRKSATGMNGSPKKGGHGGKFTWSGDGYSPAEIGFKAEVMDV 60

Query: 61 KDPNFEDLDE 71
          KDPNFEDL+E
Sbjct: 61 KDPNFEDLEE 70

BLAST of Bhi02G001620 vs. ExPASy TrEMBL
Match: A0A803NU54 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.6e-21
Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKSDARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDV 60
          MK + K SK +GKS+ +KDRKS TG+NGSPKKGGHGGKFTWAGDGYSP+E+GF+ EVMDV
Sbjct: 1  MKSAGKGSKGNGKSEVKKDRKSGTGINGSPKKGGHGGKFTWAGDGYSPSEMGFQKEVMDV 60

Query: 61 KDPNFEDLDEPVAI 75
          KDPNFED +E V +
Sbjct: 61 KDPNFEDPEEEVIV 74

BLAST of Bhi02G001620 vs. ExPASy TrEMBL
Match: A0A7J9L7H0 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_029352 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20
Identity = 59/80 (73.75%), Postives = 65/80 (81.25%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKS------DARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFK 60
          MK S KSSK +GKS      DARKDRKS TGM+GSPKKGGHGGK+TWAGDG SPAEIGF+
Sbjct: 1  MKNSGKSSKGNGKSSSSSAADARKDRKSGTGMSGSPKKGGHGGKYTWAGDGLSPAEIGFE 60

Query: 61 AEVMDVKDPNFEDLDEPVAI 75
           EV+DVKDPNFED DE V +
Sbjct: 61 KEVIDVKDPNFEDADEIVTV 80

BLAST of Bhi02G001620 vs. ExPASy TrEMBL
Match: A0A061GU30 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037765 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20
Identity = 56/72 (77.78%), Postives = 61/72 (84.72%), Query Frame = 0

Query: 1  MKKSEKSSKPSGKSDARKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDV 60
          MK + KSSK +GKSD RKDRKS TGM+GSPKKGGHGGK+TW GDG SPAEIGF  EV+DV
Sbjct: 1  MKNAGKSSKGNGKSDVRKDRKSGTGMSGSPKKGGHGGKYTWVGDGLSPAEIGFDKEVVDV 60

Query: 61 KDPNFEDLDEPV 73
          KDPNFED DE V
Sbjct: 61 KDPNFEDPDEIV 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TYK10141.16.7e-2890.54programmed cell death protein 4-like [Cucumis melo var. makuwa][more]
KAG6588005.11.6e-2485.14hypothetical protein SDJN03_16570, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8653402.11.0e-2094.92hypothetical protein Csa_007013 [Cucumis sativus][more]
MBA0854349.14.0e-2073.75hypothetical protein [Gossypium schwendimanii][more]
EOY30624.15.2e-2077.78Uncharacterized protein TCM_037765 [Theobroma cacao][more]
Match NameE-valueIdentityDescription
A0A5D3CE823.3e-2890.54Programmed cell death protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A0A0LWP42.1e-2794.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575040 PE=4 SV=1[more]
A0A803NU546.6e-2172.97Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A7J9L7H01.9e-2073.75Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_029352 PE=4... [more]
A0A061GU302.5e-2077.78Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037765 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001620Bhi02M001620mRNA