Bhi02G001413 (gene) Wax gourd (B227) v1

Overview
NameBhi02G001413
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr2: 45942184 .. 45942990 (+)
RNA-Seq ExpressionBhi02G001413
SyntenyBhi02G001413
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCAAGTGTATTTGGAGCTTTAGGAGGAGGATTTGATGTTGTCAGTGTTAAGAAGCTCAAAAGGAGAACCACCGGACATTGGCCAGAAGAAGGTATTTATGACATATGGACCTCATGAGGGGGACCATATGCCTTCAAATCCGAGCACGAGTCTTGCCATGAAGAGGAATTCGAGACACATGACTCAGATAGTTGTGTACTAGAGCCAAATGTCAAGTCAAACAAGACGAGGGTTCAGTGTACAAACTACTTGCAAATCTTAGATGAGGGGGTCTCGAGAGTGAAGACTACATTAGGGGATGTGAAGTCTGATTTGGGGGAGATGAAGGTACAACTGCGGGCAATCACTGAGATATTGCAAACATTCTATCGGGTATGTATATTTCATGATTTGCATTTTGTACTAAGGAAATTGTGTAATTGTGTAGAACAATGGGGAGGACGAGCCACATGACCATGATGGGGAGGATAAGCCACGTGATGATCATGATGGGGTGGACGTGCCACGATGGTGTTGACGAACAATATGTCGAGAGGAATACTAATATTCACTCTATTACCACCGATGCCATCCTCTCCAGAATCACTCCCATCGACCCTATCGCCGATCCCACCCTTATTGGGACCACTCCCATCGAGTATACTTTTGAGTTGATCACCATCACTGCCATCGTTCCTATAACAACCACGACTCTCACCTTCTCCAACACCACTCCCATCAACCCTAATGCCAATGCCTCCTTCATCGGGACCATTCCTATTGAGCATACCTCTGAGCCTATCACTACCAGTACCATGGTGC

mRNA sequence

ATGAATGCAAGTGTATTTGGAGCTTTAGGAGGAGGATTTGATGTTGTCAGTGTTAAGAAGCTCAAAAGGAGAACCACCGGACATTGGCCAGAAGAAGGGGGACCATATGCCTTCAAATCCGAGCACGAGTCTTGCCATGAAGAGGAATTCGAGACACATGACTCAGATAGTTGTGTACTAGAGCCAAATGTCAAGTCAAACAAGACGAGGGTTCAGTGTACAAACTACTTGCAAATCTTAGATGAGGGGGTCTCGAGAGTGAAGACTACATTAGGGGATGTGAAGTCTGATTTGGGGGAGATGAAGGTACAACTGCGGGCAATCACTGAGATATTGCAAACATTCTATCGGCCACATGACCATGATGGGGAGGATAAGCCACGTGATGATCATGATGGGGTGGACAGGAATACTAATATTCACTCTATTACCACCGATGCCATCCTCTCCAGAATCACTCCCATCGACCCTATCGCCGATCCCACCCTTATTGGGACCACTCCCATCGAGTATACTTTTGAGTTGATCACCATCACTGCCATCGTTCCTATAACAACCACGACTCTCACCTTCTCCAACACCACTCCCATCAACCCTAATGCCAATGCCTCCTTCATCGGGACCATTCCTATTGAGCATACCTCTGAGCCTATCACTACCAGTACCATGGTGC

Coding sequence (CDS)

ATGAATGCAAGTGTATTTGGAGCTTTAGGAGGAGGATTTGATGTTGTCAGTGTTAAGAAGCTCAAAAGGAGAACCACCGGACATTGGCCAGAAGAAGGGGGACCATATGCCTTCAAATCCGAGCACGAGTCTTGCCATGAAGAGGAATTCGAGACACATGACTCAGATAGTTGTGTACTAGAGCCAAATGTCAAGTCAAACAAGACGAGGGTTCAGTGTACAAACTACTTGCAAATCTTAGATGAGGGGGTCTCGAGAGTGAAGACTACATTAGGGGATGTGAAGTCTGATTTGGGGGAGATGAAGGTACAACTGCGGGCAATCACTGAGATATTGCAAACATTCTATCGGCCACATGACCATGATGGGGAGGATAAGCCACGTGATGATCATGATGGGGTGGACAGGAATACTAATATTCACTCTATTACCACCGATGCCATCCTCTCCAGAATCACTCCCATCGACCCTATCGCCGATCCCACCCTTATTGGGACCACTCCCATCGAGTATACTTTTGAGTTGATCACCATCACTGCCATCGTTCCTATAACAACCACGACTCTCACCTTCTCCAACACCACTCCCATCAACCCTAATGCCAATGCCTCCTTCATCGGGACCATTCCTATTGAGCATACCTCTGAGCCTATCACTACCAGTACCATGGTGC

Protein sequence

MNASVFGALGGGFDVVSVKKLKRRTTGHWPEEGGPYAFKSEHESCHEEEFETHDSDSCVLEPNVKSNKTRVQCTNYLQILDEGVSRVKTTLGDVKSDLGEMKVQLRAITEILQTFYRPHDHDGEDKPRDDHDGVDRNTNIHSITTDAILSRITPIDPIADPTLIGTTPIEYTFELITITAIVPITTTTLTFSNTTPINPNANASFIGTIPIEHTSEPITTSTMV
Homology
[Close]
BLAST of Bhi02G001413 vs. NCBI nr
Match: XP_038902208.1 (uncharacterized protein LOC120088836 [Benincasa hispida])

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-16
Identity = 76/186 (40.86%), Postives = 98/186 (52.69%), Query Frame = 0 

Query: 38  FKSEHESCHEEEFETHDSDSCVLEPNVKSNKTRVQCTNYLQILDEGVSRVKTTLG----- 97
           F+ EHE   +    +      V EP+V  N+  ++  +YLQILDE VSRV TTL      
Sbjct: 3   FQFEHEFATKRNLRS--VSRRVPEPDVNLNRINIRSKDYLQILDERVSRVVTTLREVKSD 62

Query: 98  --DVKSDLGEMKVQLRAITEILQTFYR------PHDHDGEDKPRDDHDGVDRNTNIHSIT 157
             +VKSDLGE+KVQLR ITEILQT  R        DHDGED+  DD DG D  ++   + 
Sbjct: 63  LVEVKSDLGEVKVQLREITEILQTLCRNNAEDESRDHDGEDEQHDD-DGEDERSDHDRVD 122

Query: 158 TDAILSRITPIDPIADPTLIGTTPIE----------------YTFELITITAIVPITTTT 195
            + +  +  PIDPI+DP L  TTP+                 +   L +  AIVPITTT 
Sbjct: 123 EEHV--KRNPIDPISDPNLSSTTPVNPISNPNISSSTHNDPIFNPSLSSTIAIVPITTTN 182

The following BLAST results are available for this feature:
BLAST of Bhi02G001413 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi02G001413 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi02G001413 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038902208.12.1e-1640.86uncharacterized protein LOC120088836 [Benincasa hispida][more]
BLAST of Bhi02G001413 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..138

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001413Bhi02M001413mRNA