Bhi02G001218 (gene) Wax gourd (B227) v1

Overview


Name	Bhi02G001218
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Ribulose bisphosphate carboxylase large chain
Location	chr2: 37952367 .. 37952847 (-)
RNA-Seq Expression	Bhi02G001218
Synteny	Bhi02G001218

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAGCATTACGTTTGTCTGGTGGAGACCATATTCACGCTGGTATCGTAGTAGGTAAACTTGAAGGGGAAAGAGAAATCACTTCAGGCTTTGTTGATTTACTACGTGATGATTTTTTGAAAAAGACCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTCTCTTTACCAGGTGTTCTACCAGTGGCTTCCGGTGATATTCACGTTTGGCATATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTCCTACAATTCGGCGGAGGAACTTTGGGGCACCCTTGGGTAATGTACCTGGTGCCGTAGCTAACCGAGTAGCTCTAAAGCATGTGACAAGCTCGTAATGAGGGACGTGATCTTGCTCATGAGGGTAATGAAATTATCCGTGAAGCTAGTAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGAGATCAAAGTTGAATTTGAGGCAATGGATACTTTGTAA

mRNA sequence

CTAAAGCATTACGTTTGTCTGGTGGAGACCATATTCACGCTGGTATCGTAGTAGACCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTCTCTTTACCAGGTGTTCTACCAGTGGCTTCCGGTGATATTCACGTTTGGCATATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTCCTACAATTCGGCGGAGGAACTTTGGGGCACCCTTGGGGTAATGAAATTATCCGTGAAGCTAGTAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGAGATCAAAGTTGAATTTGAGGCAATGGATACTTTGTAA

Coding sequence (CDS)

CTAAAGCATTACGTTTGTCTGGTGGAGACCATATTCACGCTGGTATCGTAGTAGACCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTCTCTTTACCAGGTGTTCTACCAGTGGCTTCCGGTGATATTCACGTTTGGCATATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTCCTACAATTCGGCGGAGGAACTTTGGGGCACCCTTGGGGTAATGAAATTATCCGTGAAGCTAGTAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGAGATCAAAGTTGAATTTGAGGCAATGGATACTTTGTAA

Protein sequence

KALRLSGGDHIHAGIVVDRSRGIYFTQDWVSLPGVLPVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNEIIREASKWSPELAAACEVWKEIKVEFEAMDTL

Homology

[Close]

BLAST of Bhi02G001218 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases )

HSP 1 Score: 180.6 bits (457), Expect = 6.5e-46
Identity = 96/160 (60.00%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGI+FTQDWVSLPGVL
Sbjct: 316 KALRLSGGDHIHAGTVVGKLEGDRESTLGFVDLLRDDYVEKDRSRGIFFTQDWVSLPGVL 375

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 376 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGR 435

[Close]

BLAST of Bhi02G001218 vs. ExPASy Swiss-Prot
Match: Q33245 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Ulmus alata OX=24736 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-49
Identity = 104/160 (65.00%), Postives = 105/160 (65.62%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 306 KALRLSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVL 365

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 366 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVKARNEGR 425

[Close]

BLAST of Bhi02G001218 vs. ExPASy Swiss-Prot
Match: P28458 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trochodendron aralioides OX=4407 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.1e-49
Identity = 103/160 (64.38%), Postives = 105/160 (65.62%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALR+SGGDHIH+GIVV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 306 KALRMSGGDHIHSGIVVGKLEGERDITLGFVDLLRDDLVEEDRSRGIYFTQDWVSLPGVL 365

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 366 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGR 425

[Close]

BLAST of Bhi02G001218 vs. ExPASy Swiss-Prot
Match: P28430 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Manilkara zapota OX=3741 GN=rbcL PE=3 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 2.7e-49
Identity = 103/160 (64.38%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDH+HAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 306 KALRLSGGDHVHAGTVVGKLEGEREITLGFVDLLRDDYVEKDRSRGIYFTQDWVSLPGVL 365

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 366 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGR 425

[Close]

BLAST of Bhi02G001218 vs. ExPASy Swiss-Prot
Match: P27066 (Ribulose bisphosphate carboxylase large chain OS=Glycine max OX=3847 GN=rbcL PE=1 SV=3)

HSP 1 Score: 195.7 bits (496), Expect = 2.7e-49
Identity = 103/160 (64.38%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDH+HAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 316 KALRLSGGDHVHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVL 375

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 376 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGR 435

[Close]

BLAST of Bhi02G001218 vs. ExPASy Swiss-Prot
Match: O19872 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Bixa orellana OX=66672 GN=rbcL PE=3 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 3.6e-49
Identity = 103/160 (64.38%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGIYFTQDWVSLPGV+
Sbjct: 307 KALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVI 366

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 367 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGR 426

[Close]

BLAST of Bhi02G001218 vs. NCBI nr
Match: KAF8380768.1 (hypothetical protein HHK36_028258 [Tetracentron sinense])

HSP 1 Score: 200.7 bits (509), Expect = 6.5e-48
Identity = 101/135 (74.81%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALR+SG DHIH+G VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 294 KALRMSGRDHIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVL 353

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW----GNEIIREASKWSPELAAACE 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW    GNEIIREASKWSPELAAACE
Sbjct: 354 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGNEIIREASKWSPELAAACE 413

[Close]

BLAST of Bhi02G001218 vs. NCBI nr
Match: QHO49823.1 (Ribulose bisphosphate carboxylase large chain [Arachis hypogaea])

HSP 1 Score: 200.3 bits (508), Expect = 8.5e-48
Identity = 100/136 (73.53%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVVDRSRGIYFTQDWVSLPGVLPVASGDIHVWHMPALTEIFGDDSV 60
           +ALRLSGGDHIHAG VVDRSRGIYFTQDWVSLPGVLPVAS  IHVWHMPALTEIFGDDSV
Sbjct: 21  QALRLSGGDHIHAGTVVDRSRGIYFTQDWVSLPGVLPVASRGIHVWHMPALTEIFGDDSV 80

Query: 61  LQFGGGTLGHPW-----------------------------GNEIIREASKWSPELAAAC 108
           LQFGGGTLGHPW                             GNEIIREASKWSPELAAAC
Sbjct: 81  LQFGGGTLGHPWGNAPGAVSNRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAAC 140

[Close]

BLAST of Bhi02G001218 vs. NCBI nr
Match: Q33245.1 (RecName: Full=Ribulose bisphosphate carboxylase large chain; Short=RuBisCO large subunit [Ulmus alata])

HSP 1 Score: 196.8 bits (499), Expect = 9.4e-47
Identity = 104/160 (65.00%), Postives = 105/160 (65.62%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 306 KALRLSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVL 365

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 366 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVKARNEGR 425

[Close]

BLAST of Bhi02G001218 vs. NCBI nr
Match: AAA20538.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Ulmus alata])

HSP 1 Score: 196.8 bits (499), Expect = 9.4e-47
Identity = 104/160 (65.00%), Postives = 105/160 (65.62%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 316 KALRLSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVL 375

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 376 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVKARNEGR 435

[Close]

BLAST of Bhi02G001218 vs. NCBI nr
Match: BAU22316.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Toxicodendron succedaneum] >BAU22320.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Toxicodendron succedaneum] >BAU22324.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Toxicodendron succedaneum])

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-46
Identity = 104/160 (65.00%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 292 KALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVL 351

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 352 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVKARNEGR 411

[Close]

BLAST of Bhi02G001218 vs. ExPASy TrEMBL
Match: A0A251TG16 (Ribulose bisphosphate carboxylase large chain OS=Helianthus annuus OX=4232 GN=RBL PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.4e-50
Identity = 100/131 (76.34%), Postives = 104/131 (79.39%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALR+SGGDHIH+G VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 201 KALRMSGGDHIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVL 260

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNEIIREASKWSPELAAACEVWKE 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNEIIREA+KWSPELAAACEVWKE
Sbjct: 261 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNEIIREATKWSPELAAACEVWKE 320

[Close]

BLAST of Bhi02G001218 vs. ExPASy TrEMBL
Match: A0A6M4SRZ5 (Ribulose bisphosphate carboxylase large chain OS=Hovenia dulcis OX=99292 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.7e-47
Identity = 104/160 (65.00%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 316 KALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVL 375

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 376 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGR 435

[Close]

BLAST of Bhi02G001218 vs. ExPASy TrEMBL
Match: A0A221S5I6 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Paliurus hemsleyanus OX=210383 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.7e-47
Identity = 104/160 (65.00%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 295 KALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVL 354

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 355 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGR 414

[Close]

BLAST of Bhi02G001218 vs. ExPASy TrEMBL
Match: Q6R616 (Ribulose bisphosphate carboxylase large chain OS=Toxicodendron sylvestre OX=269722 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.7e-47
Identity = 104/160 (65.00%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 316 KALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVL 375

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 376 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGR 435

[Close]

BLAST of Bhi02G001218 vs. ExPASy TrEMBL
Match: A0A345WK52 (Ribulose bisphosphate carboxylase large chain OS=Euryodendron excelsum OX=194712 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.7e-47
Identity = 104/160 (65.00%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 1   KALRLSGGDHIHAGIVV------------------------DRSRGIYFTQDWVSLPGVL 60
           KALRLSGGDHIHAG VV                        DRSRGIYFTQDWVSLPGVL
Sbjct: 316 KALRLSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVL 375

Query: 61  PVASGDIHVWHMPALTEIFGDDSVLQFGGGTLGHPW------------------------ 108
           PVASG IHVWHMPALTEIFGDDSVLQFGGGTLGHPW                        
Sbjct: 376 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGR 435

The following BLAST results are available for this feature:

BLAST of Bhi02G001218 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00490.1	6.5e-46	60.00	ribulose-bisphosphate carboxylases	[more]

BLAST of Bhi02G001218 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q33245	1.2e-49	65.00	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Ulmus alata OX=24736...	[more]
P28458	2.1e-49	64.38	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trochodendron aralio...	[more]
P28430	2.7e-49	64.38	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Manilkara zapota OX=...	[more]
P27066	2.7e-49	64.38	Ribulose bisphosphate carboxylase large chain OS=Glycine max OX=3847 GN=rbcL PE=...	[more]
O19872	3.6e-49	64.38	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Bixa orellana OX=666...	[more]

BLAST of Bhi02G001218 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF8380768.1	6.5e-48	74.81	hypothetical protein HHK36_028258 [Tetracentron sinense]	[more]
QHO49823.1	8.5e-48	73.53	Ribulose bisphosphate carboxylase large chain [Arachis hypogaea]	[more]
Q33245.1	9.4e-47	65.00	RecName: Full=Ribulose bisphosphate carboxylase large chain; Short=RuBisCO large...	[more]
AAA20538.1	9.4e-47	65.00	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Ulmus al...	[more]
BAU22316.1	1.6e-46	65.00	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Toxicode...	[more]

BLAST of Bhi02G001218 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A251TG16	3.4e-50	76.34	Ribulose bisphosphate carboxylase large chain OS=Helianthus annuus OX=4232 GN=RB...	[more]
A0A6M4SRZ5	7.7e-47	65.00	Ribulose bisphosphate carboxylase large chain OS=Hovenia dulcis OX=99292 GN=rbcL...	[more]
A0A221S5I6	7.7e-47	65.00	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Paliurus hemsleyanus...	[more]
Q6R616	7.7e-47	65.00	Ribulose bisphosphate carboxylase large chain OS=Toxicodendron sylvestre OX=2697...	[more]
A0A345WK52	7.7e-47	65.00	Ribulose bisphosphate carboxylase large chain OS=Euryodendron excelsum OX=194712...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000685	Ribulose bisphosphate carboxylase, large subunit, C-terminal	PFAM	PF00016	RuBisCO_large	coord: 17..74 e-value: 8.3E-19 score: 67.9
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	GENE3D	3.20.20.110		coord: 1..107 e-value: 3.0E-31 score: 110.5
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	SUPERFAMILY	51649	RuBisCo, C-terminal domain	coord: 1..106
None	No IPR available	PANTHER	PTHR42704:SF8	RIBULOSE BISPHOSPHATE CARBOXYLASE, LARGE SUBUNIT-RELATED	coord: 73..106
None	No IPR available	PANTHER	PTHR42704:SF8	RIBULOSE BISPHOSPHATE CARBOXYLASE, LARGE SUBUNIT-RELATED	coord: 18..74
IPR033966	RuBisCO	PANTHER	PTHR42704	RIBULOSE BISPHOSPHATE CARBOXYLASE	coord: 18..74 coord: 73..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001218	Bhi02M001218	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0043229	intracellular organelle
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0000287	magnesium ion binding