Bhi02G000967 (gene) Wax gourd (B227) v1

Overview
NameBhi02G000967
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr2: 26671744 .. 26672492 (+)
RNA-Seq ExpressionBhi02G000967
SyntenyBhi02G000967
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCCAAAGAAGAAGGAAGGAGAGGTGCACGAGTTGAGCTCGACCCAAAGAACAACAACATATATATCCTTACCAATTGTTGGACAAACAAATTATTCTTCTAACCATTAGAATGGAGGACAAAATCAATTTATCAATCAAATCAGAGACATGCAAGGAATAATTGAAAGCAAACCCGCTTTGTTCCTATACCCATGTCATATATAGAACATTTCCCATGATTATTAAAGAATCATCAAGTAGCCATTACACCTCAAGAGCCTCTACAACCATCGTATCCTAAGTGGTACGACCCAAGTGCAAGGTATGAATATCGTGCTGGGACAGTGGGGCACTCTGCTGAGAATTGTTATCCTTTGAAAGCTAAAGTACAAAGTCTAGTTAAGGTCGAATGGTTGAAATTCAAGAAGATTGGTGAAGAACTAGATGTCAACCAAAACTCATTTCCAAACCATGAAAATCCTATCGTAAATGTTGTTGATACACCCTCGGAATGTTGCAAGGATAATGTTCATGATTTTACCACACCGATGGAGACTCTTTTCCTAATTCTTCATAAAGTTGGATATATATCATCGAGAGTTGACAGTAATGACGTAGGTAGAATGAGATGCGTTGGTAAAAAGCGATGTTCGTTTCACCCTGGAATAAATGGACATTCCATAGAGAATTATGTCGAATTCAAAAGAGAAGTACAGAAATTGATGGATGCAAAAATTTTGATAGTAAGTCAAGCAGACATGTAG

mRNA sequence

ATGACTCCAAAGAAGAAGGAAGGAGAGAATCATCAAGTAGCCATTACACCTCAAGAGCCTCTACAACCATCGTATCCTAAGTGGTACGACCCAAGTGCAAGGTATGAATATCGTGCTGGGACAGTGGGGCACTCTGCTGAGAATTGTTATCCTTTGAAAGCTAAAGTACAAAGTCTAGTTAAGGTCGAATGGTTGAAATTCAAGAAGATTGGTGAAGAACTAGATGTCAACCAAAACTCATTTCCAAACCATGAAAATCCTATCGTAAATGTTGTTGATACACCCTCGGAATGTTGCAAGGATAATGTTCATGATTTTACCACACCGATGGAGACTCTTTTCCTAATTCTTCATAAAGTTGGATATATATCATCGAGAGTTGACAGTAATGACGTAGGTAGAATGAGATGCGTTGGTAAAAAGCGATGTTCGTTTCACCCTGGAATAAATGGACATTCCATAGAGAATTATGTCGAATTCAAAAGAGAAGTACAGAAATTGATGGATGCAAAAATTTTGATAGTAAGTCAAGCAGACATGTAG

Coding sequence (CDS)

ATGACTCCAAAGAAGAAGGAAGGAGAGAATCATCAAGTAGCCATTACACCTCAAGAGCCTCTACAACCATCGTATCCTAAGTGGTACGACCCAAGTGCAAGGTATGAATATCGTGCTGGGACAGTGGGGCACTCTGCTGAGAATTGTTATCCTTTGAAAGCTAAAGTACAAAGTCTAGTTAAGGTCGAATGGTTGAAATTCAAGAAGATTGGTGAAGAACTAGATGTCAACCAAAACTCATTTCCAAACCATGAAAATCCTATCGTAAATGTTGTTGATACACCCTCGGAATGTTGCAAGGATAATGTTCATGATTTTACCACACCGATGGAGACTCTTTTCCTAATTCTTCATAAAGTTGGATATATATCATCGAGAGTTGACAGTAATGACGTAGGTAGAATGAGATGCGTTGGTAAAAAGCGATGTTCGTTTCACCCTGGAATAAATGGACATTCCATAGAGAATTATGTCGAATTCAAAAGAGAAGTACAGAAATTGATGGATGCAAAAATTTTGATAGTAAGTCAAGCAGACATGTAG

Protein sequence

MTPKKKEGENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFKKIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVDSNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM
Homology
BLAST of Bhi02G000967 vs. NCBI nr
Match: KAA0045605.1 (Gag-pro-like protein [Cucumis melo var. makuwa] >TYK02652.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.8 bits (582), Expect = 3.7e-56
Identity = 112/172 (65.12%), Postives = 129/172 (75.00%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+AR EY AGTVGHS ENC+PLKAKVQSLVK  WLKFK
Sbjct: 12  KSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSLVKAGWLKFK 71

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           K GEELDVNQN  PNHE P +NVVDT +E  K+ V   TT M TLF ILH  GY+S R +
Sbjct: 72  KTGEELDVNQNPLPNHEGPAINVVDTFTERNKNMVSGVTTSMNTLFQILHGAGYLSPRFN 131

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           ++D  ++ CV K+ C F+   N HSIE+  EFK  VQKLMDAKIL+V Q  M
Sbjct: 132 NDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQISM 183

BLAST of Bhi02G000967 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 106/172 (61.63%), Postives = 128/172 (74.42%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+A+ EY AG VGHS ENC+PLKAKVQSLVK  WL+FK
Sbjct: 409 KSHQVAIVPQEPLQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFK 468

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           K GEE DVNQN  PNHE PI+N VDT  +  K+ V D  T M+TLF ILH  GY+S R +
Sbjct: 469 KTGEEPDVNQNPLPNHEGPIINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFN 528

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           ++D  ++ C   ++C FHP  N HSIE+  EFK EVQKLMD+KIL++ Q  M
Sbjct: 529 NDDREKIGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSM 580

BLAST of Bhi02G000967 vs. NCBI nr
Match: KAA0055146.1 (uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55
Identity = 107/172 (62.21%), Postives = 128/172 (74.42%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+ + EY AG VGHS ENC+PLKAKVQSLVK  WLKFK
Sbjct: 415 KSHQVAIVPQEPLQPPYPKWYDPNVKCEYHAGVVGHSTENCFPLKAKVQSLVKAGWLKFK 474

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           KI EE DVNQN  PNHE P +N+VDT +E  K+ V D TT M TLF IL + GY+S R +
Sbjct: 475 KIEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRRAGYLSPRFN 534

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           +++  +  C  +K+C FHP I+ H IE+  EFK EVQKLMDAKIL+V Q  M
Sbjct: 535 NDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVGQMSM 586

BLAST of Bhi02G000967 vs. NCBI nr
Match: KAA0059731.1 (uncharacterized protein E6C27_scaffold551G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 224.9 bits (572), Expect = 5.4e-55
Identity = 106/172 (61.63%), Postives = 130/172 (75.58%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+A+ EY AG +GHS EN +PLKAKVQSLVK  WLKFK
Sbjct: 79  KSHQVAIIPQEPLQPPYPKWYDPNAKCEYHAGAIGHSMENYFPLKAKVQSLVKAGWLKFK 138

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           K GEE DVNQNS PNHE P +NVV+T ++  K+ V   TT M+TLF ILH  GY+S R +
Sbjct: 139 KTGEEPDVNQNSLPNHEGPAINVVNTFTQRHKNRVSGITTSMKTLFQILHGAGYLSPRFN 198

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           ++D  ++ C  K++C FHP  N HSIE+  EFK EVQKL+DAKIL++ Q  M
Sbjct: 199 NDDREKIGCTNKEQCLFHPETNDHSIEDCCEFKNEVQKLLDAKILLIGQMSM 250

BLAST of Bhi02G000967 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 224.6 bits (571), Expect = 7.1e-55
Identity = 105/172 (61.05%), Postives = 127/172 (73.84%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+A+ EY AG VGHS ENC+PLKAKVQSLVK  WL+FK
Sbjct: 409 KSHQVAIVPQEPLQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFK 468

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           K GEE DVNQN  PNHE P +N VDT  +  K+ V D  T M+TLF ILH  GY+S R +
Sbjct: 469 KTGEEPDVNQNPLPNHEGPSINAVDTFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFN 528

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           ++D  ++ C   ++C FHP  N HSIE+  EFK EVQKLMD+KIL++ Q  M
Sbjct: 529 NDDREKIGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSM 580

BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match: A0A5A7TW53 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00640 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.8e-56
Identity = 112/172 (65.12%), Postives = 129/172 (75.00%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+AR EY AGTVGHS ENC+PLKAKVQSLVK  WLKFK
Sbjct: 12  KSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSLVKAGWLKFK 71

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           K GEELDVNQN  PNHE P +NVVDT +E  K+ V   TT M TLF ILH  GY+S R +
Sbjct: 72  KTGEELDVNQNPLPNHEGPAINVVDTFTERNKNMVSGVTTSMNTLFQILHGAGYLSPRFN 131

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           ++D  ++ CV K+ C F+   N HSIE+  EFK  VQKLMDAKIL+V Q  M
Sbjct: 132 NDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQISM 183

BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.3e-56
Identity = 106/172 (61.63%), Postives = 128/172 (74.42%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+A+ EY AG VGHS ENC+PLKAKVQSLVK  WL+FK
Sbjct: 409 KSHQVAIVPQEPLQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFK 468

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           K GEE DVNQN  PNHE PI+N VDT  +  K+ V D  T M+TLF ILH  GY+S R +
Sbjct: 469 KTGEEPDVNQNPLPNHEGPIINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFN 528

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           ++D  ++ C   ++C FHP  N HSIE+  EFK EVQKLMD+KIL++ Q  M
Sbjct: 529 NDDREKIGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSM 580

BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match: A0A5A7ULI2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00770 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 107/172 (62.21%), Postives = 128/172 (74.42%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+ + EY AG VGHS ENC+PLKAKVQSLVK  WLKFK
Sbjct: 415 KSHQVAIVPQEPLQPPYPKWYDPNVKCEYHAGVVGHSTENCFPLKAKVQSLVKAGWLKFK 474

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           KI EE DVNQN  PNHE P +N+VDT +E  K+ V D TT M TLF IL + GY+S R +
Sbjct: 475 KIEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRRAGYLSPRFN 534

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           +++  +  C  +K+C FHP I+ H IE+  EFK EVQKLMDAKIL+V Q  M
Sbjct: 535 NDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVGQMSM 586

BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match: A0A5A7V1X3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold551G00070 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.6e-55
Identity = 106/172 (61.63%), Postives = 130/172 (75.58%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+A+ EY AG +GHS EN +PLKAKVQSLVK  WLKFK
Sbjct: 79  KSHQVAIIPQEPLQPPYPKWYDPNAKCEYHAGAIGHSMENYFPLKAKVQSLVKAGWLKFK 138

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           K GEE DVNQNS PNHE P +NVV+T ++  K+ V   TT M+TLF ILH  GY+S R +
Sbjct: 139 KTGEEPDVNQNSLPNHEGPAINVVNTFTQRHKNRVSGITTSMKTLFQILHGAGYLSPRFN 198

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           ++D  ++ C  K++C FHP  N HSIE+  EFK EVQKL+DAKIL++ Q  M
Sbjct: 199 NDDREKIGCTNKEQCLFHPETNDHSIEDCCEFKNEVQKLLDAKILLIGQMSM 250

BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.4e-55
Identity = 105/172 (61.05%), Postives = 127/172 (73.84%), Query Frame = 0

Query: 9   ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
           ++HQVAI PQEPLQP YPKWYDP+A+ EY AG VGHS ENC+PLKAKVQSLVK  WL+FK
Sbjct: 409 KSHQVAIVPQEPLQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFK 468

Query: 69  KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
           K GEE DVNQN  PNHE P +N VDT  +  K+ V D  T M+TLF ILH  GY+S R +
Sbjct: 469 KTGEEPDVNQNPLPNHEGPSINAVDTFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFN 528

Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
           ++D  ++ C   ++C FHP  N HSIE+  EFK EVQKLMD+KIL++ Q  M
Sbjct: 529 NDDREKIGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSM 580

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0045605.13.7e-5665.12Gag-pro-like protein [Cucumis melo var. makuwa] >TYK02652.1 Gag-pro-like protein... [more]
KAA0065293.11.1e-5561.63uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa][more]
KAA0055146.12.4e-5562.21uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa][more]
KAA0059731.15.4e-5561.63uncharacterized protein E6C27_scaffold551G00070 [Cucumis melo var. makuwa][more]
KAA0061241.17.1e-5561.05uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5A7TW531.8e-5665.12Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280... [more]
A0A5A7VAU55.3e-5661.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7ULI21.2e-5562.21Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7V1X32.6e-5561.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V6813.4e-5561.05Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000967Bhi02M000967mRNA