Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCCAAAGAAGAAGGAAGGAGAGGTGCACGAGTTGAGCTCGACCCAAAGAACAACAACATATATATCCTTACCAATTGTTGGACAAACAAATTATTCTTCTAACCATTAGAATGGAGGACAAAATCAATTTATCAATCAAATCAGAGACATGCAAGGAATAATTGAAAGCAAACCCGCTTTGTTCCTATACCCATGTCATATATAGAACATTTCCCATGATTATTAAAGAATCATCAAGTAGCCATTACACCTCAAGAGCCTCTACAACCATCGTATCCTAAGTGGTACGACCCAAGTGCAAGGTATGAATATCGTGCTGGGACAGTGGGGCACTCTGCTGAGAATTGTTATCCTTTGAAAGCTAAAGTACAAAGTCTAGTTAAGGTCGAATGGTTGAAATTCAAGAAGATTGGTGAAGAACTAGATGTCAACCAAAACTCATTTCCAAACCATGAAAATCCTATCGTAAATGTTGTTGATACACCCTCGGAATGTTGCAAGGATAATGTTCATGATTTTACCACACCGATGGAGACTCTTTTCCTAATTCTTCATAAAGTTGGATATATATCATCGAGAGTTGACAGTAATGACGTAGGTAGAATGAGATGCGTTGGTAAAAAGCGATGTTCGTTTCACCCTGGAATAAATGGACATTCCATAGAGAATTATGTCGAATTCAAAAGAGAAGTACAGAAATTGATGGATGCAAAAATTTTGATAGTAAGTCAAGCAGACATGTAG
mRNA sequence
ATGACTCCAAAGAAGAAGGAAGGAGAGAATCATCAAGTAGCCATTACACCTCAAGAGCCTCTACAACCATCGTATCCTAAGTGGTACGACCCAAGTGCAAGGTATGAATATCGTGCTGGGACAGTGGGGCACTCTGCTGAGAATTGTTATCCTTTGAAAGCTAAAGTACAAAGTCTAGTTAAGGTCGAATGGTTGAAATTCAAGAAGATTGGTGAAGAACTAGATGTCAACCAAAACTCATTTCCAAACCATGAAAATCCTATCGTAAATGTTGTTGATACACCCTCGGAATGTTGCAAGGATAATGTTCATGATTTTACCACACCGATGGAGACTCTTTTCCTAATTCTTCATAAAGTTGGATATATATCATCGAGAGTTGACAGTAATGACGTAGGTAGAATGAGATGCGTTGGTAAAAAGCGATGTTCGTTTCACCCTGGAATAAATGGACATTCCATAGAGAATTATGTCGAATTCAAAAGAGAAGTACAGAAATTGATGGATGCAAAAATTTTGATAGTAAGTCAAGCAGACATGTAG
Coding sequence (CDS)
ATGACTCCAAAGAAGAAGGAAGGAGAGAATCATCAAGTAGCCATTACACCTCAAGAGCCTCTACAACCATCGTATCCTAAGTGGTACGACCCAAGTGCAAGGTATGAATATCGTGCTGGGACAGTGGGGCACTCTGCTGAGAATTGTTATCCTTTGAAAGCTAAAGTACAAAGTCTAGTTAAGGTCGAATGGTTGAAATTCAAGAAGATTGGTGAAGAACTAGATGTCAACCAAAACTCATTTCCAAACCATGAAAATCCTATCGTAAATGTTGTTGATACACCCTCGGAATGTTGCAAGGATAATGTTCATGATTTTACCACACCGATGGAGACTCTTTTCCTAATTCTTCATAAAGTTGGATATATATCATCGAGAGTTGACAGTAATGACGTAGGTAGAATGAGATGCGTTGGTAAAAAGCGATGTTCGTTTCACCCTGGAATAAATGGACATTCCATAGAGAATTATGTCGAATTCAAAAGAGAAGTACAGAAATTGATGGATGCAAAAATTTTGATAGTAAGTCAAGCAGACATGTAG
Protein sequence
MTPKKKEGENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFKKIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVDSNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM
Homology
BLAST of Bhi02G000967 vs. NCBI nr
Match:
KAA0045605.1 (Gag-pro-like protein [Cucumis melo var. makuwa] >TYK02652.1 Gag-pro-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 228.8 bits (582), Expect = 3.7e-56
Identity = 112/172 (65.12%), Postives = 129/172 (75.00%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+AR EY AGTVGHS ENC+PLKAKVQSLVK WLKFK
Sbjct: 12 KSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSLVKAGWLKFK 71
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
K GEELDVNQN PNHE P +NVVDT +E K+ V TT M TLF ILH GY+S R +
Sbjct: 72 KTGEELDVNQNPLPNHEGPAINVVDTFTERNKNMVSGVTTSMNTLFQILHGAGYLSPRFN 131
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
++D ++ CV K+ C F+ N HSIE+ EFK VQKLMDAKIL+V Q M
Sbjct: 132 NDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQISM 183
BLAST of Bhi02G000967 vs. NCBI nr
Match:
KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 106/172 (61.63%), Postives = 128/172 (74.42%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+A+ EY AG VGHS ENC+PLKAKVQSLVK WL+FK
Sbjct: 409 KSHQVAIVPQEPLQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFK 468
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
K GEE DVNQN PNHE PI+N VDT + K+ V D T M+TLF ILH GY+S R +
Sbjct: 469 KTGEEPDVNQNPLPNHEGPIINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFN 528
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
++D ++ C ++C FHP N HSIE+ EFK EVQKLMD+KIL++ Q M
Sbjct: 529 NDDREKIGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSM 580
BLAST of Bhi02G000967 vs. NCBI nr
Match:
KAA0055146.1 (uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa])
HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55
Identity = 107/172 (62.21%), Postives = 128/172 (74.42%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+ + EY AG VGHS ENC+PLKAKVQSLVK WLKFK
Sbjct: 415 KSHQVAIVPQEPLQPPYPKWYDPNVKCEYHAGVVGHSTENCFPLKAKVQSLVKAGWLKFK 474
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
KI EE DVNQN PNHE P +N+VDT +E K+ V D TT M TLF IL + GY+S R +
Sbjct: 475 KIEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRRAGYLSPRFN 534
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
+++ + C +K+C FHP I+ H IE+ EFK EVQKLMDAKIL+V Q M
Sbjct: 535 NDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVGQMSM 586
BLAST of Bhi02G000967 vs. NCBI nr
Match:
KAA0059731.1 (uncharacterized protein E6C27_scaffold551G00070 [Cucumis melo var. makuwa])
HSP 1 Score: 224.9 bits (572), Expect = 5.4e-55
Identity = 106/172 (61.63%), Postives = 130/172 (75.58%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+A+ EY AG +GHS EN +PLKAKVQSLVK WLKFK
Sbjct: 79 KSHQVAIIPQEPLQPPYPKWYDPNAKCEYHAGAIGHSMENYFPLKAKVQSLVKAGWLKFK 138
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
K GEE DVNQNS PNHE P +NVV+T ++ K+ V TT M+TLF ILH GY+S R +
Sbjct: 139 KTGEEPDVNQNSLPNHEGPAINVVNTFTQRHKNRVSGITTSMKTLFQILHGAGYLSPRFN 198
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
++D ++ C K++C FHP N HSIE+ EFK EVQKL+DAKIL++ Q M
Sbjct: 199 NDDREKIGCTNKEQCLFHPETNDHSIEDCCEFKNEVQKLLDAKILLIGQMSM 250
BLAST of Bhi02G000967 vs. NCBI nr
Match:
KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])
HSP 1 Score: 224.6 bits (571), Expect = 7.1e-55
Identity = 105/172 (61.05%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+A+ EY AG VGHS ENC+PLKAKVQSLVK WL+FK
Sbjct: 409 KSHQVAIVPQEPLQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFK 468
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
K GEE DVNQN PNHE P +N VDT + K+ V D T M+TLF ILH GY+S R +
Sbjct: 469 KTGEEPDVNQNPLPNHEGPSINAVDTFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFN 528
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
++D ++ C ++C FHP N HSIE+ EFK EVQKLMD+KIL++ Q M
Sbjct: 529 NDDREKIGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSM 580
BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match:
A0A5A7TW53 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00640 PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 1.8e-56
Identity = 112/172 (65.12%), Postives = 129/172 (75.00%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+AR EY AGTVGHS ENC+PLKAKVQSLVK WLKFK
Sbjct: 12 KSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSLVKAGWLKFK 71
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
K GEELDVNQN PNHE P +NVVDT +E K+ V TT M TLF ILH GY+S R +
Sbjct: 72 KTGEELDVNQNPLPNHEGPAINVVDTFTERNKNMVSGVTTSMNTLFQILHGAGYLSPRFN 131
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
++D ++ CV K+ C F+ N HSIE+ EFK VQKLMDAKIL+V Q M
Sbjct: 132 NDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQISM 183
BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match:
A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)
HSP 1 Score: 227.3 bits (578), Expect = 5.3e-56
Identity = 106/172 (61.63%), Postives = 128/172 (74.42%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+A+ EY AG VGHS ENC+PLKAKVQSLVK WL+FK
Sbjct: 409 KSHQVAIVPQEPLQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFK 468
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
K GEE DVNQN PNHE PI+N VDT + K+ V D T M+TLF ILH GY+S R +
Sbjct: 469 KTGEEPDVNQNPLPNHEGPIINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFN 528
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
++D ++ C ++C FHP N HSIE+ EFK EVQKLMD+KIL++ Q M
Sbjct: 529 NDDREKIGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSM 580
BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match:
A0A5A7ULI2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00770 PE=4 SV=1)
HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 107/172 (62.21%), Postives = 128/172 (74.42%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+ + EY AG VGHS ENC+PLKAKVQSLVK WLKFK
Sbjct: 415 KSHQVAIVPQEPLQPPYPKWYDPNVKCEYHAGVVGHSTENCFPLKAKVQSLVKAGWLKFK 474
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
KI EE DVNQN PNHE P +N+VDT +E K+ V D TT M TLF IL + GY+S R +
Sbjct: 475 KIEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRRAGYLSPRFN 534
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
+++ + C +K+C FHP I+ H IE+ EFK EVQKLMDAKIL+V Q M
Sbjct: 535 NDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVGQMSM 586
BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match:
A0A5A7V1X3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold551G00070 PE=4 SV=1)
HSP 1 Score: 224.9 bits (572), Expect = 2.6e-55
Identity = 106/172 (61.63%), Postives = 130/172 (75.58%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+A+ EY AG +GHS EN +PLKAKVQSLVK WLKFK
Sbjct: 79 KSHQVAIIPQEPLQPPYPKWYDPNAKCEYHAGAIGHSMENYFPLKAKVQSLVKAGWLKFK 138
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
K GEE DVNQNS PNHE P +NVV+T ++ K+ V TT M+TLF ILH GY+S R +
Sbjct: 139 KTGEEPDVNQNSLPNHEGPAINVVNTFTQRHKNRVSGITTSMKTLFQILHGAGYLSPRFN 198
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
++D ++ C K++C FHP N HSIE+ EFK EVQKL+DAKIL++ Q M
Sbjct: 199 NDDREKIGCTNKEQCLFHPETNDHSIEDCCEFKNEVQKLLDAKILLIGQMSM 250
BLAST of Bhi02G000967 vs. ExPASy TrEMBL
Match:
A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)
HSP 1 Score: 224.6 bits (571), Expect = 3.4e-55
Identity = 105/172 (61.05%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 9 ENHQVAITPQEPLQPSYPKWYDPSARYEYRAGTVGHSAENCYPLKAKVQSLVKVEWLKFK 68
++HQVAI PQEPLQP YPKWYDP+A+ EY AG VGHS ENC+PLKAKVQSLVK WL+FK
Sbjct: 409 KSHQVAIVPQEPLQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFK 468
Query: 69 KIGEELDVNQNSFPNHENPIVNVVDTPSECCKDNVHDFTTPMETLFLILHKVGYISSRVD 128
K GEE DVNQN PNHE P +N VDT + K+ V D T M+TLF ILH GY+S R +
Sbjct: 469 KTGEEPDVNQNPLPNHEGPSINAVDTFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFN 528
Query: 129 SNDVGRMRCVGKKRCSFHPGINGHSIENYVEFKREVQKLMDAKILIVSQADM 181
++D ++ C ++C FHP N HSIE+ EFK EVQKLMD+KIL++ Q M
Sbjct: 529 NDDREKIGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSM 580
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0045605.1 | 3.7e-56 | 65.12 | Gag-pro-like protein [Cucumis melo var. makuwa] >TYK02652.1 Gag-pro-like protein... | [more] |
KAA0065293.1 | 1.1e-55 | 61.63 | uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa] | [more] |
KAA0055146.1 | 2.4e-55 | 62.21 | uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa] | [more] |
KAA0059731.1 | 5.4e-55 | 61.63 | uncharacterized protein E6C27_scaffold551G00070 [Cucumis melo var. makuwa] | [more] |
KAA0061241.1 | 7.1e-55 | 61.05 | uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TW53 | 1.8e-56 | 65.12 | Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280... | [more] |
A0A5A7VAU5 | 5.3e-56 | 61.63 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7ULI2 | 1.2e-55 | 62.21 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7V1X3 | 2.6e-55 | 61.63 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7V681 | 3.4e-55 | 61.05 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |