Bhi02G000678 (gene) Wax gourd (B227) v1

Overview
NameBhi02G000678
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionNucleoid-associated protein
Locationchr2: 18282308 .. 18287516 (+)
RNA-Seq ExpressionBhi02G000678
SyntenyBhi02G000678
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGGTCTGTCTTTATGAAATATAACCGGCGGGTGATGTTTAAGCGTGGTCTCTTCCTGAGAAAATCTACTTTATAGTTTATCCTCTCGACTCTCTTTTCAGCATATTCACAGCAGCTTTGAGCAATGGCGTCGACGATATCACTGAGTGCTCAATTGCCAAATCTCCGAGGAATGTCTGATTTCAAAAAACGAAGTTAGTTCCATTCTGTAACTCTTTTTCTCCTTTTCATTTTCTTTGGTTGCTGAGACCTTGGGAAATTGAGTTTCGGATTGATTGCTATATCTCTGAATTGAATTGAATTGGTTGCTTGGGACTTACTTTTGTATTGTATAGCATGTAGCTATTTCGTAACCACTCAATCTAACGGAAGGATCTAAGTTGGTGGGGATGGTTAGTATGGCTTTGTTCATTGGGAAGATTTGCCGATCGGTTGAAGTTTAGACCTAAAATAGAATTGTCTGGCGGTGTCCTCAGTTCTAATTACTGCATGGGTTAGGTTCATTTCTGTCTAAGAATTATTGTTTTCTTAGTAGAATCGAAGTAAAATTGTGATAGGTGAGTGGGGGAGATTCTCTTAATTTGAACTTGAAGGCAGATGCGTTCTATGTACATAATTGTGTGAAGAACATGAAAGAAGAAGGCTGTGATCTGGGAAATTTACTTCAAAACTATTTAATTAGTTTGGATAAGCCTCAAAACTTTCTACTACTAGGGTTACTTAGCAGTAAGATTATCCTCCTGAAAAACTGTTTATTGAGAATGAATGACATGAACCAGTCAAGTTTAATTCTTAGTTTGTAACCTAGACTGAAGCTGGTTGCATATCTGATAATGCCAATATTAAAACTGAATAAATCCCCTGTCTACTTCATTAGTAGAACTCTTCAACAAGCTAGATGTATCAAAAGAAGCAGCGCTGTTTTGGAATGACTTTTTTAAGTGCTGAAAAAAGTATTTTCAAGTGCAAAAAATATGCGTTTTTAAGTACTTAGGAAGTTATTCCAAACAGGCCCTTCGCTGTGCAAGACGGTTTAAGAATTTAATGTTTTGTTTTTTATAATTTGAAATTTGAATATAATACTTTTGAGTTTGCACAATAGAAATTTCCAATTTTTATTCTGGAATTGGAGATGAATTCCACTTTTTGTGACATTTGATTGTACACACTATACTTATTAATGTATAATTTATCCTTTTCTGGCTGCATGCCTCTTACAGGCAACCTAAATTCAGTGTCAAATATTATTGGTGTGCGGATCTCACCTTATGGTCCTTGGAAAGTTGAGAAACATAACAGATCTCTTTGCGTTTATGGTCTATTTGGAGGAAAAAAGGATAATGAGGAGAAGAGTGATGATGCGCCTTCAAAGGTAGAACTTTTATCTGTAATATGTTAAAACAGTATAAATTTTGAGACCAAATAGAAATGTCTCTCAAAGTTGAAGTGACTTTTCCTTGCAAGTGAGGTGAAACCATCGTTACTTACATGCTAACTTTTTTTTAGGCAGGAATCTTTGGGAACATGCAGAAGTTATATGAAACTGTGAGGACAGCACAAAAGGTTGTCCAAGTAGAGGCAGTGCGTGTACAAAAAGAACTTGCGGCGTAAGACCAAACAAGTTAATTAAATGTATTGTTGCTTGATGATGTTTTTCTCTGTTTTGTGAAGTTGTCTGAACTTTTTTTATTCCTTCTATGTTTCTGTTTTCCAGGGCAGAGTTTGATGGCTACTGTGAAGGAGAGCTAATAAAGGTATGTTCTGCCTCTCTCTCTTGCGCCAAGTTCATCTTCACTTTGCCCAGAACTATGCGATCACAAAGGTTGTTAGAGAAGTGAAAGTGTTGCTTAAGATTGTAAATATGTTTTCCCTCTTGATTTTAGGTAGCTAGTAAATAAAGTACAGATTCTAGAGTAATGGCCTGTATTTATTTTGGGTGTTACAAGGGTGAACAGGTCTAAAGTTTGTGATTACTAATCTTCCTTTCTCGTTTTAAGATGATAAGCATATCCAATTTCTTTATATTCAACCGGGTTGTAGTGGATTTAAAATCTCTTGGGGCCATCTCCTTGAGATGTTAATCATTACAAAATATTTTTGTAGTATCAATGATAGTTCAGGGAATTTTGAAAGAGAAAAAATCATGATTTATGAAAAGAATTATAGAAGTATCGAGCTCGCAACAAAAGGTTATGGATCTGACATTTGGTTTCATGCAAGGCCTAGCATAGCCTTTCCATTTAATGAGAATTATGGTATAAAAGAATGTGTTCATATCATGTTTGAATATCACCTCATATCTGCCCTAATATTTTTCTGTCGACTAATATAGGTGACATTATCCGGGAATCAGCAACCTCTTCGTACAGAGATTACCGAGGCTGCAATGGAATTAGGACCAGAGGTGAGTATTCACGATGCTGTGGTGCACTTTCACATTTAAAATGGCATTGCTCGTAATTAGCATTTTTACATTGAACTTCCATTAACATCCTCAATTCACAACTTACACGACTTAATGCTTGCCCCACCTGTCCTGTCCTCGATCCAAGCTTGGAGTATATCTTCTGTTGGTGCTCGGTGGAATTATGACTCTTAACACCACGAGTTTGAAAATTGGCTGGCTATAGGACTAAGACCCGCCTACATTGGCATGTGGCTCAAAAAAGTTTGACAACCATACTTGAATATTTTTAAAAATAGTTATTAGTTACCAGTAACATTGTAAAAGATATGTTTCCTAGGATATTTCTTGAATGGGTGGTTTCCATAGTGAAATAATTTCCATTAAAATTTCTGATTGTGCTTGTGATGGATAGTCCAAATATTCAGATCTTTACTTTCTTATGCAGAAACTTTCCCTTCTAGTTACTGAAGCTTATCAGGACGCACATCAGAAGAGCGTTCAGGCAAGACTTATTCCAATATTAATTTAATTACCAAGTTTTATTTCTGCATAACTGACAGTTAGCCCTTTGATTCTCAGGCCATGAAACAAAGAATGAGTGATCTTGCCCAGAGCTTAGGTATGCCCCAGGGGCTCAGTGAGGGATTAAAGTAGACGTTTTATGTCTGTCGAGCATCAGTTTTGTGGACACAGCGGCAGTGGGACGACTTAATTGTAATCTGACCTTTGCAGTGAATTCCATATTAGTTTTTACTGGTGAACTAAATGTTTGGGAACAAACCTTGTTCTCCATCTCTGAATGTAAAAAAGACAAGCTGTGATATTTATTGTGGTATCAGTACAAAGAATCAAAAGAATGAGATGAGAATGAGATTTCCAATTGGAATCTTCTGTAGGAGCAATATCGACAATGGCATTTGGGTTTGCTAAGGGGAAAGGAAAGTTATTTGATAATGTATGGAAATTTGATCTCTTGAAAAAAAAAGAGCTTAAAACTTTTAGATGTTAGTAAAATAATCTTTGTTCAACCTTTTCATCTGGAACTTGAAATGGGCAATAACATTGACATGGTGTATCCAATATAAATTGTGGAATGAATACCATTCTAGTTCCCTAAATCTCAGCACTGTTGTGTACTGGAATTGTTGGAAATTTATGACCAATATCTAGAAACGAGACAAATGACCAGTTTCTTGTTCTGTGTTCATTGGTCTGTTTCTTTGCAGATAATAAATCAAGATCTTGGCAGATGTTTTCCTGCTAGAAACGATCTGAAGAGTGTCAAAGCTCTCTGTGGTTGGATCAATGGAACTTCATGCCCTGCTCCTCTCACTGTGGCAAAGGTTAGCCCTTCATAAACCTCTGTCCATCCACCAACCTGCTAGGTACATTTCATTCAATTTGATTAAAGCATTTCATTACAAAGAACAAAACAAAAGACAGAGTTCTTCATATGTAACCTGTCTTCTGGAGTACCATGGATACCAGCGAGTTTTAATGGGGAGGTTAAGATGGCTAAGGGCAAATCTTGTGGCTGTCACTGGAACCACTGAATCTGTATCCCCGCTGCATTTTTTCACTTGTAAATGTCACATCGAAGAAGTTTAAGGGCATATAATAATTTATACTAAACTTTGGGTTTATCGATTCAAGTTTTGAACTTTCGTAAGTGTATCAGTTTATAC

mRNA sequence

ATTGGTCTGTCTTTATGAAATATAACCGGCGGGTGATGTTTAAGCGTGGTCTCTTCCTGAGAAAATCTACTTTATAGTTTATCCTCTCGACTCTCTTTTCAGCATATTCACAGCAGCTTTGAGCAATGGCGTCGACGATATCACTGAGTGCTCAATTGCCAAATCTCCGAGGAATGTCTGATTTCAAAAAACGAAGCAACCTAAATTCAGTGTCAAATATTATTGGTGTGCGGATCTCACCTTATGGTCCTTGGAAAGTTGAGAAACATAACAGATCTCTTTGCGTTTATGGTCTATTTGGAGGAAAAAAGGATAATGAGGAGAAGAGTGATGATGCGCCTTCAAAGGCAGGAATCTTTGGGAACATGCAGAAGTTATATGAAACTGTGAGGACAGCACAAAAGGTTGTCCAAGTAGAGGCAGTGCGTGTACAAAAAGAACTTGCGGCGGCAGAGTTTGATGGCTACTGTGAAGGAGAGCTAATAAAGGTGACATTATCCGGGAATCAGCAACCTCTTCGTACAGAGATTACCGAGGCTGCAATGGAATTAGGACCAGAGAAACTTTCCCTTCTAGTTACTGAAGCTTATCAGGACGCACATCAGAAGAGCGTTCAGGCCATGAAACAAAGAATGAGTGATCTTGCCCAGAGCTTAGGTATGCCCCAGGGGCTCAGTGAGGGATTAAAGTAGACGTTTTATGTCTGTCGAGCATCAGTTTTGTGGACACAGCGGCAGTGGGACGACTTAATTGTAATCTGACCTTTGCAGTGAATTCCATATTAGTTTTTACTGGTGAACTAAATGTTTGGGAACAAACCTTGTTCTCCATCTCTGAATGTAAAAAAGACAAGCTGTGATATTTATTGTGGTATCAGTACAAAGAATCAAAAGAATGAGATGAGAATGAGATTTCCAATTGGAATCTTCTGTAGGAGCAATATCGACAATGGCATTTGGGTTTGCTAAGGGGAAAGGAAAGTTATTTGATAATGTATGGAAATTTGATCTCTTGAAAAAAAAAGAGCTTAAAACTTTTAGATGTTAGTAAAATAATCTTTGTTCAACCTTTTCATCTGGAACTTGAAATGGGCAATAACATTGACATGGTGTATCCAATATAAATTGTGGAATGAATACCATTCTAGTTCCCTAAATCTCAGCACTGTTGTGTACTGGAATTGTTGGAAATTTATGACCAATATCTAGAAACGAGACAAATGACCAGTTTCTTGTTCTGTGTTCATTGGTCTGTTTCTTTGCAGATAATAAATCAAGATCTTGGCAGATGTTTTCCTGCTAGAAACGATCTGAAGAGTGTCAAAGCTCTCTGTGGTTGGATCAATGGAACTTCATGCCCTGCTCCTCTCACTGTGGCAAAGAACAAAACAAAAGACAGAGTTCTTCATATGTAACCTGTCTTCTGGAGTACCATGGATACCAGCGAGTTTTAATGGGGAGGTTAAGATGGCTAAGGGCAAATCTTGTGGCTGTCACTGGAACCACTGAATCTGTATCCCCGCTGCATTTTTTCACTTGTAAATGTCACATCGAAGAAGTTTAAGGGCATATAATAATTTATACTAAACTTTGGGTTTATCGATTCAAGTTTTGAACTTTCGTAAGTGTATCAGTTTATAC

Coding sequence (CDS)

ATGGCGTCGACGATATCACTGAGTGCTCAATTGCCAAATCTCCGAGGAATGTCTGATTTCAAAAAACGAAGCAACCTAAATTCAGTGTCAAATATTATTGGTGTGCGGATCTCACCTTATGGTCCTTGGAAAGTTGAGAAACATAACAGATCTCTTTGCGTTTATGGTCTATTTGGAGGAAAAAAGGATAATGAGGAGAAGAGTGATGATGCGCCTTCAAAGGCAGGAATCTTTGGGAACATGCAGAAGTTATATGAAACTGTGAGGACAGCACAAAAGGTTGTCCAAGTAGAGGCAGTGCGTGTACAAAAAGAACTTGCGGCGGCAGAGTTTGATGGCTACTGTGAAGGAGAGCTAATAAAGGTGACATTATCCGGGAATCAGCAACCTCTTCGTACAGAGATTACCGAGGCTGCAATGGAATTAGGACCAGAGAAACTTTCCCTTCTAGTTACTGAAGCTTATCAGGACGCACATCAGAAGAGCGTTCAGGCCATGAAACAAAGAATGAGTGATCTTGCCCAGAGCTTAGGTATGCCCCAGGGGCTCAGTGAGGGATTAAAGTAG

Protein sequence

MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMPQGLSEGLK
Homology
BLAST of Bhi02G000678 vs. TAIR 10
Match: AT2G24020.1 (Uncharacterised BCR, YbaB family COG0718 )

HSP 1 Score: 208.4 bits (529), Expect = 5.1e-54
Identity = 114/147 (77.55%), Postives = 125/147 (85.03%), Query Frame = 0

Query: 43  WKVEKHNRSLCVYGLF-GGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVR 102
           +K +   RSL V GLF GG KDN   S+D  SKAGIFGNMQ +YETV+ AQ VVQVEAVR
Sbjct: 38  YKSKNGYRSLRVNGLFGGGNKDN--NSEDGQSKAGIFGNMQNMYETVKKAQMVVQVEAVR 97

Query: 103 VQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQK 162
           VQKELAAAEFDGYC GEL+KVTLSGNQQP+RT+ITEAAMELG EKLS LVTEAY+DAH K
Sbjct: 98  VQKELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSEKLSQLVTEAYKDAHAK 157

Query: 163 SVQAMKQRMSDLAQSLGMPQGLSEGLK 189
           SV AMK+RMSDLAQSLGMP GLSEG+K
Sbjct: 158 SVVAMKERMSDLAQSLGMPPGLSEGMK 182

BLAST of Bhi02G000678 vs. TAIR 10
Match: AT2G24020.2 (Uncharacterised BCR, YbaB family COG0718 )

HSP 1 Score: 208.4 bits (529), Expect = 5.1e-54
Identity = 114/147 (77.55%), Postives = 125/147 (85.03%), Query Frame = 0

Query: 43  WKVEKHNRSLCVYGLF-GGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVR 102
           +K +   RSL V GLF GG KDN   S+D  SKAGIFGNMQ +YETV+ AQ VVQVEAVR
Sbjct: 36  YKSKNGYRSLRVNGLFGGGNKDN--NSEDGQSKAGIFGNMQNMYETVKKAQMVVQVEAVR 95

Query: 103 VQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQK 162
           VQKELAAAEFDGYC GEL+KVTLSGNQQP+RT+ITEAAMELG EKLS LVTEAY+DAH K
Sbjct: 96  VQKELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSEKLSQLVTEAYKDAHAK 155

Query: 163 SVQAMKQRMSDLAQSLGMPQGLSEGLK 189
           SV AMK+RMSDLAQSLGMP GLSEG+K
Sbjct: 156 SVVAMKERMSDLAQSLGMPPGLSEGMK 180

BLAST of Bhi02G000678 vs. TAIR 10
Match: AT4G30620.1 (Uncharacterised BCR, YbaB family COG0718 )

HSP 1 Score: 204.9 bits (520), Expect = 5.6e-53
Identity = 113/142 (79.58%), Postives = 124/142 (87.32%), Query Frame = 0

Query: 48  HNRSLCVYGLF-GGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKEL 107
           +NRSL V GLF GGKKDN+E   D  SKAGI GNMQ LYETV+ AQ VVQVEAVRVQKEL
Sbjct: 43  NNRSLRVNGLFGGGKKDNKE---DGQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKEL 102

Query: 108 AAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAM 167
           A AEFDGYC+GEL+KVTLSGNQQP+RT+IT+AAMELG EKLSLLVTEAY+DAH KSV AM
Sbjct: 103 AVAEFDGYCQGELVKVTLSGNQQPIRTDITDAAMELGSEKLSLLVTEAYKDAHSKSVLAM 162

Query: 168 KQRMSDLAQSLGMPQGLSEGLK 189
           K+RMSDLAQSLGMP GL +GLK
Sbjct: 163 KERMSDLAQSLGMPPGL-DGLK 180

BLAST of Bhi02G000678 vs. ExPASy Swiss-Prot
Match: O82230 (Nucleoid-associated protein At2g24020, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STIC2 PE=1 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 7.2e-53
Identity = 114/147 (77.55%), Postives = 125/147 (85.03%), Query Frame = 0

Query: 43  WKVEKHNRSLCVYGLF-GGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVR 102
           +K +   RSL V GLF GG KDN   S+D  SKAGIFGNMQ +YETV+ AQ VVQVEAVR
Sbjct: 38  YKSKNGYRSLRVNGLFGGGNKDN--NSEDGQSKAGIFGNMQNMYETVKKAQMVVQVEAVR 97

Query: 103 VQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQK 162
           VQKELAAAEFDGYC GEL+KVTLSGNQQP+RT+ITEAAMELG EKLS LVTEAY+DAH K
Sbjct: 98  VQKELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSEKLSQLVTEAYKDAHAK 157

Query: 163 SVQAMKQRMSDLAQSLGMPQGLSEGLK 189
           SV AMK+RMSDLAQSLGMP GLSEG+K
Sbjct: 158 SVVAMKERMSDLAQSLGMPPGLSEGMK 182

BLAST of Bhi02G000678 vs. ExPASy Swiss-Prot
Match: Q9M098 (Nucleoid-associated protein At4g30620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g30620 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.9e-52
Identity = 113/142 (79.58%), Postives = 124/142 (87.32%), Query Frame = 0

Query: 48  HNRSLCVYGLF-GGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKEL 107
           +NRSL V GLF GGKKDN+E   D  SKAGI GNMQ LYETV+ AQ VVQVEAVRVQKEL
Sbjct: 43  NNRSLRVNGLFGGGKKDNKE---DGQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKEL 102

Query: 108 AAAEFDGYCEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAM 167
           A AEFDGYC+GEL+KVTLSGNQQP+RT+IT+AAMELG EKLSLLVTEAY+DAH KSV AM
Sbjct: 103 AVAEFDGYCQGELVKVTLSGNQQPIRTDITDAAMELGSEKLSLLVTEAYKDAHSKSVLAM 162

Query: 168 KQRMSDLAQSLGMPQGLSEGLK 189
           K+RMSDLAQSLGMP GL +GLK
Sbjct: 163 KERMSDLAQSLGMPPGL-DGLK 180

BLAST of Bhi02G000678 vs. ExPASy Swiss-Prot
Match: Q5N376 (Nucleoid-associated protein syc1054_d OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=syc1054_d PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-14
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0

Query: 79  GNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEA 138
           G M++L +  + AQ+ VQ  A +VQ++L   E +G  +G L+KV +SGNQ+PLR EI   
Sbjct: 11  GKMKELADAFKKAQQ-VQEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAPE 70

Query: 139 AMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 181
           A+  G E LS LV  A +DA+QKS  AMK++M  L   LG+P
Sbjct: 71  ALNEGAEVLSELVAAAMKDAYQKSTAAMKEKMEALTAGLGIP 111

BLAST of Bhi02G000678 vs. ExPASy Swiss-Prot
Match: Q8GMT0 (Nucleoid-associated protein Synpcc7942_0464 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=Synpcc7942_0464 PE=3 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-14
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0

Query: 79  GNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEA 138
           G M++L +  + AQ+ VQ  A +VQ++L   E +G  +G L+KV +SGNQ+PLR EI   
Sbjct: 11  GKMKELADAFKKAQQ-VQEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAPE 70

Query: 139 AMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 181
           A+  G E LS LV  A +DA+QKS  AMK++M  L   LG+P
Sbjct: 71  ALNEGAEVLSELVAAAMKDAYQKSTAAMKEKMEALTAGLGIP 111

BLAST of Bhi02G000678 vs. ExPASy Swiss-Prot
Match: B7K422 (Nucleoid-associated protein PCC8801_2554 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=PCC8801_2554 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-13
Identity = 41/102 (40.20%), Postives = 66/102 (64.71%), Query Frame = 0

Query: 79  GNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPLRTEITEA 138
           G +++L E    AQ+ VQ  A ++Q+EL   E +G+ EG+L+KV +SGNQ+P    I   
Sbjct: 12  GKIKELQEAFAKAQQ-VQAGAQQLQQELEQMEIEGFSEGKLVKVIMSGNQEPRSVTILPE 71

Query: 139 AMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 181
           A+E G ++LS LVT+A +DA+ +S + M+ +M +L   L +P
Sbjct: 72  ALEKGADELSQLVTDAMKDAYTQSTETMRTKMEELTSGLNLP 112

BLAST of Bhi02G000678 vs. NCBI nr
Match: XP_038879413.1 (nucleoid-associated protein At4g30620, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 3.5e-97
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60
           MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60

Query: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI
Sbjct: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180
           KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP
Sbjct: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180

Query: 181 QGLSEGLK 189
           QGLSEGLK
Sbjct: 181 QGLSEGLK 188

BLAST of Bhi02G000678 vs. NCBI nr
Match: XP_038879412.1 (nucleoid-associated protein At4g30620, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 358.6 bits (919), Expect = 3.3e-95
Identity = 188/194 (96.91%), Postives = 188/194 (96.91%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRS------NLNSVSNIIGVRISPYGPWKVEKHNRSLCV 60
           MASTISLSAQLPNLRGMSDFKKRS      NLNSVSNIIGVRISPYGPWKVEKHNRSLCV
Sbjct: 1   MASTISLSAQLPNLRGMSDFKKRSCMPLTGNLNSVSNIIGVRISPYGPWKVEKHNRSLCV 60

Query: 61  YGLFGGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGY 120
           YGLFGGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGY
Sbjct: 61  YGLFGGKKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGY 120

Query: 121 CEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLA 180
           CEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLA
Sbjct: 121 CEGELIKVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLA 180

Query: 181 QSLGMPQGLSEGLK 189
           QSLGMPQGLSEGLK
Sbjct: 181 QSLGMPQGLSEGLK 194

BLAST of Bhi02G000678 vs. NCBI nr
Match: XP_004146679.1 (nucleoid-associated protein At2g24020, chloroplastic [Cucumis sativus] >KGN65167.1 hypothetical protein Csa_019766 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 179/188 (95.21%), Postives = 185/188 (98.40%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60
           MASTISLSAQLPNLRG+SDFKKRSNLNS+SNI+G R+SPYGPWKVEK+NRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDFKKRSNLNSMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KKD EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI
Sbjct: 61  KKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180
           KVTLSGNQQP+RTEITEAAMELGPEKLSLLVTEAYQDAHQKSV AMKQRMSDLAQSLGMP
Sbjct: 121 KVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVLAMKQRMSDLAQSLGMP 180

Query: 181 QGLSEGLK 189
           QGLSEGLK
Sbjct: 181 QGLSEGLK 187

BLAST of Bhi02G000678 vs. NCBI nr
Match: XP_008443852.1 (PREDICTED: nucleoid-associated protein At2g24020, chloroplastic-like [Cucumis melo] >KAA0035094.1 nucleoid-associated protein [Cucumis melo var. makuwa] >TYJ95984.1 nucleoid-associated protein [Cucumis melo var. makuwa])

HSP 1 Score: 344.7 bits (883), Expect = 4.9e-91
Identity = 178/188 (94.68%), Postives = 184/188 (97.87%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60
           MASTISLSAQLPNLRG+SD KKRSNLN +SNI+G R+SPYGPWKVEK+NRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KKD EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI
Sbjct: 61  KKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180
           KVTLSGNQQP+RTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP
Sbjct: 121 KVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180

Query: 181 QGLSEGLK 189
           QGLSEGLK
Sbjct: 181 QGLSEGLK 187

BLAST of Bhi02G000678 vs. NCBI nr
Match: XP_022932159.1 (nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022965200.1 nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 342.4 bits (877), Expect = 2.4e-90
Identity = 175/188 (93.09%), Postives = 184/188 (97.87%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60
           MASTIS+SAQ+PNLRG+SD+KKRSNLNS+S IIG RISPYGPWKVEK+NRSLCV GLFGG
Sbjct: 1   MASTISISAQVPNLRGISDWKKRSNLNSMSKIIGTRISPYGPWKVEKNNRSLCVCGLFGG 60

Query: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KK+NEEKSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELA AEFDGYCEGELI
Sbjct: 61  KKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180
           KVTLSGNQQPLRTEITEAAM+LGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP
Sbjct: 121 KVTLSGNQQPLRTEITEAAMKLGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180

Query: 181 QGLSEGLK 189
           QGLSEGLK
Sbjct: 181 QGLSEGLK 188

BLAST of Bhi02G000678 vs. ExPASy TrEMBL
Match: A0A0A0LWF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256760 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.2e-92
Identity = 179/188 (95.21%), Postives = 185/188 (98.40%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60
           MASTISLSAQLPNLRG+SDFKKRSNLNS+SNI+G R+SPYGPWKVEK+NRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDFKKRSNLNSMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KKD EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI
Sbjct: 61  KKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180
           KVTLSGNQQP+RTEITEAAMELGPEKLSLLVTEAYQDAHQKSV AMKQRMSDLAQSLGMP
Sbjct: 121 KVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVLAMKQRMSDLAQSLGMP 180

Query: 181 QGLSEGLK 189
           QGLSEGLK
Sbjct: 181 QGLSEGLK 187

BLAST of Bhi02G000678 vs. ExPASy TrEMBL
Match: A0A5A7SUZ8 (Nucleoid-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00540 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.4e-91
Identity = 178/188 (94.68%), Postives = 184/188 (97.87%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60
           MASTISLSAQLPNLRG+SD KKRSNLN +SNI+G R+SPYGPWKVEK+NRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KKD EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI
Sbjct: 61  KKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180
           KVTLSGNQQP+RTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP
Sbjct: 121 KVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180

Query: 181 QGLSEGLK 189
           QGLSEGLK
Sbjct: 181 QGLSEGLK 187

BLAST of Bhi02G000678 vs. ExPASy TrEMBL
Match: A0A1S3B9T2 (nucleoid-associated protein At2g24020, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487347 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.4e-91
Identity = 178/188 (94.68%), Postives = 184/188 (97.87%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60
           MASTISLSAQLPNLRG+SD KKRSNLN +SNI+G R+SPYGPWKVEK+NRSLCVYGLFGG
Sbjct: 1   MASTISLSAQLPNLRGISDLKKRSNLNLMSNIVGTRLSPYGPWKVEKNNRSLCVYGLFGG 60

Query: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KKD EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI
Sbjct: 61  KKD-EEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180
           KVTLSGNQQP+RTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP
Sbjct: 121 KVTLSGNQQPIRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180

Query: 181 QGLSEGLK 189
           QGLSEGLK
Sbjct: 181 QGLSEGLK 187

BLAST of Bhi02G000678 vs. ExPASy TrEMBL
Match: A0A6J1HN29 (nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465126 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 175/188 (93.09%), Postives = 184/188 (97.87%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60
           MASTIS+SAQ+PNLRG+SD+KKRSNLNS+S IIG RISPYGPWKVEK+NRSLCV GLFGG
Sbjct: 1   MASTISISAQVPNLRGISDWKKRSNLNSMSKIIGTRISPYGPWKVEKNNRSLCVCGLFGG 60

Query: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KK+NEEKSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELA AEFDGYCEGELI
Sbjct: 61  KKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180
           KVTLSGNQQPLRTEITEAAM+LGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP
Sbjct: 121 KVTLSGNQQPLRTEITEAAMKLGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180

Query: 181 QGLSEGLK 189
           QGLSEGLK
Sbjct: 181 QGLSEGLK 188

BLAST of Bhi02G000678 vs. ExPASy TrEMBL
Match: A0A6J1EW88 (nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438476 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 175/188 (93.09%), Postives = 184/188 (97.87%), Query Frame = 0

Query: 1   MASTISLSAQLPNLRGMSDFKKRSNLNSVSNIIGVRISPYGPWKVEKHNRSLCVYGLFGG 60
           MASTIS+SAQ+PNLRG+SD+KKRSNLNS+S IIG RISPYGPWKVEK+NRSLCV GLFGG
Sbjct: 1   MASTISISAQVPNLRGISDWKKRSNLNSMSKIIGTRISPYGPWKVEKNNRSLCVCGLFGG 60

Query: 61  KKDNEEKSDDAPSKAGIFGNMQKLYETVRTAQKVVQVEAVRVQKELAAAEFDGYCEGELI 120
           KK+NEEKSDDAPSKAGIFGNMQKLYETVRTAQ+VVQVEAVRVQKELA AEFDGYCEGELI
Sbjct: 61  KKENEEKSDDAPSKAGIFGNMQKLYETVRTAQQVVQVEAVRVQKELAVAEFDGYCEGELI 120

Query: 121 KVTLSGNQQPLRTEITEAAMELGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180
           KVTLSGNQQPLRTEITEAAM+LGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP
Sbjct: 121 KVTLSGNQQPLRTEITEAAMKLGPEKLSLLVTEAYQDAHQKSVQAMKQRMSDLAQSLGMP 180

Query: 181 QGLSEGLK 189
           QGLSEGLK
Sbjct: 181 QGLSEGLK 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G24020.15.1e-5477.55Uncharacterised BCR, YbaB family COG0718 [more]
AT2G24020.25.1e-5477.55Uncharacterised BCR, YbaB family COG0718 [more]
AT4G30620.15.6e-5379.58Uncharacterised BCR, YbaB family COG0718 [more]
Match NameE-valueIdentityDescription
O822307.2e-5377.55Nucleoid-associated protein At2g24020, chloroplastic OS=Arabidopsis thaliana OX=... [more]
Q9M0987.9e-5279.58Nucleoid-associated protein At4g30620, chloroplastic OS=Arabidopsis thaliana OX=... [more]
Q5N3762.9e-1446.08Nucleoid-associated protein syc1054_d OS=Synechococcus sp. (strain ATCC 27144 / ... [more]
Q8GMT02.9e-1446.08Nucleoid-associated protein Synpcc7942_0464 OS=Synechococcus elongatus (strain P... [more]
B7K4223.3e-1340.20Nucleoid-associated protein PCC8801_2554 OS=Rippkaea orientalis (strain PCC 8801... [more]
Match NameE-valueIdentityDescription
XP_038879413.13.5e-97100.00nucleoid-associated protein At4g30620, chloroplastic isoform X2 [Benincasa hispi... [more]
XP_038879412.13.3e-9596.91nucleoid-associated protein At4g30620, chloroplastic isoform X1 [Benincasa hispi... [more]
XP_004146679.11.3e-9195.21nucleoid-associated protein At2g24020, chloroplastic [Cucumis sativus] >KGN65167... [more]
XP_008443852.14.9e-9194.68PREDICTED: nucleoid-associated protein At2g24020, chloroplastic-like [Cucumis me... [more]
XP_022932159.12.4e-9093.09nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 [Cucurbita ... [more]
Match NameE-valueIdentityDescription
A0A0A0LWF86.2e-9295.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256760 PE=4 SV=1[more]
A0A5A7SUZ82.4e-9194.68Nucleoid-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3B9T22.4e-9194.68nucleoid-associated protein At2g24020, chloroplastic-like OS=Cucumis melo OX=365... [more]
A0A6J1HN291.2e-9093.09nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbit... [more]
A0A6J1EW881.2e-9093.09nucleoid-associated protein At4g30620, chloroplastic-like isoform X1 OS=Cucurbit... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004401Nucleoid-associated protein YbaB/EbfC familyPFAMPF02575YbaB_DNA_bdcoord: 92..176
e-value: 4.8E-17
score: 62.0
IPR004401Nucleoid-associated protein YbaB/EbfC familyPANTHERPTHR33449NUCLEOID-ASSOCIATED PROTEIN YBABcoord: 3..188
IPR036894Nucleoid-associated protein YbaB-like domain superfamilyGENE3D3.30.1310.10coord: 77..185
e-value: 3.0E-31
score: 109.6
IPR036894Nucleoid-associated protein YbaB-like domain superfamilySUPERFAMILY82607YbaB-likecoord: 93..181
NoneNo IPR availablePANTHERPTHR33449:SF6SUBFAMILY NOT NAMEDcoord: 3..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000678Bhi02M000678mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding