Bhi02G000673 (gene) Wax gourd (B227) v1

Overview
NameBhi02G000673
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr2: 18250024 .. 18250326 (-)
RNA-Seq ExpressionBhi02G000673
SyntenyBhi02G000673
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAATCAACGAAAGAATCGCAAAGCAAATGTTCGAGAAAGAAACCGCCACAATATAACCTTGGGAGGAATTCCGGGACGCGGGTTGCCTAGCACGTTGGCGTTCGCATCTTCTGCGTTTCCTAATCGAAACGCGATGAGATCTGAAGCTTTTGAGAGAGAGTCTGGTGGCATGTTCTTCAATTATTGCTTTGGCATTGTTTCGGGTGGCTCTTTGGTTGTTGCGAGGTGGAGGAAGATGCGGATCGGAGGAAGAGAGCCGTCCTCCATTGGCTGTTTGTTGGGGAAGATTGGGAGTTGA

mRNA sequence

ATGCAGAATCAACGAAAGAATCGCAAAGCAAATGTTCGAGAAAGAAACCGCCACAATATAACCTTGGGAGGAATTCCGGGACGCGGGTTGCCTAGCACGTTGGCGTTCGCATCTTCTGCGTTTCCTAATCGAAACGCGATGAGATCTGAAGCTTTTGAGAGAGAGTCTGGTGGCATGTTCTTCAATTATTGCTTTGGCATTGTTTCGGGTGGCTCTTTGGTTGTTGCGAGGTGGAGGAAGATGCGGATCGGAGGAAGAGAGCCGTCCTCCATTGGCTGTTTGTTGGGGAAGATTGGGAGTTGA

Coding sequence (CDS)

ATGCAGAATCAACGAAAGAATCGCAAAGCAAATGTTCGAGAAAGAAACCGCCACAATATAACCTTGGGAGGAATTCCGGGACGCGGGTTGCCTAGCACGTTGGCGTTCGCATCTTCTGCGTTTCCTAATCGAAACGCGATGAGATCTGAAGCTTTTGAGAGAGAGTCTGGTGGCATGTTCTTCAATTATTGCTTTGGCATTGTTTCGGGTGGCTCTTTGGTTGTTGCGAGGTGGAGGAAGATGCGGATCGGAGGAAGAGAGCCGTCCTCCATTGGCTGTTTGTTGGGGAAGATTGGGAGTTGA

Protein sequence

MQNQRKNRKANVRERNRHNITLGGIPGRGLPSTLAFASSAFPNRNAMRSEAFERESGGMFFNYCFGIVSGGSLVVARWRKMRIGGREPSSIGCLLGKIGS
Homology
[Close]
BLAST of Bhi02G000673 vs. NCBI nr
Match: KAE8653059.1 (hypothetical protein Csa_019911 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-09
Identity = 47/81 (58.02%), Postives = 51/81 (62.96%), Query Frame = 0 

Query: 22  LGGIPGRGLPSTLAFASSAFPNRNAMRSEAFERE-SGGMFFNYCFG-IVSGGSLVVARWR 81
           +GGI     PSTL  ASS FPNR   RS+AFER+ S        FG IVS  SLV  RWR
Sbjct: 1   MGGIVAT-TPSTLVIASSTFPNRITARSQAFERDFSTSELMRMRFGLIVSSSSLVAKRWR 60

Query: 82  KMRIGGREP-SSIGCLLGKIG 100
           KM IGGRE    +GCLLGKIG
Sbjct: 61  KMWIGGREVFFFVGCLLGKIG 80

The following BLAST results are available for this feature:
BLAST of Bhi02G000673 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi02G000673 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi02G000673 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653059.11.9e-0958.02hypothetical protein Csa_019911 [Cucumis sativus][more]
BLAST of Bhi02G000673 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000673Bhi02M000673mRNA