Bhi02G000351 (gene) Wax gourd (B227) v1

Overview


Name	Bhi02G000351
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Plant transposase
Location	chr2: 8758635 .. 8758982 (-)
RNA-Seq Expression	Bhi02G000351
Synteny	Bhi02G000351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTATGACCACCTACTAAAAGAGGTAGGGGTCCAGAGGAAAAAATCAAATGCATCTAAACATGATAATGATAGTTTGCCTCTTCTGAATGACCACCCTAAATATTTCTCTCCCAATCCTAGTGAGAAGATAACTAAATGTAATCCTATTTTAATTCCTACATTAGACTCATCGGCTGCTCGAACAAGATTAGCAATTCGTAGGCAAACAATAACTTCTAATGCAAACAGACTTGAAAATGAAGATCACATAGTCAATGAACCCCCATCTGAAACAACGACTTTGCCAAAAAGAACAAGGGGCCCTACAAAGACGAAGACAATAGCCGTTGATAAACAACCTTGA

mRNA sequence

ATGTTGTATGACCACCTACTAAAAGAGGTAGGGGTCCAGAGGAAAAAATCAAATGCATCTAAACATGATAATGATAGTTTGCCTCTTCTGAATGACCACCCTAAATATTTCTCTCCCAATCCTAGTGAGAAGATAACTAAATGTAATCCTATTTTAATTCCTACATTAGACTCATCGGCTGCTCGAACAAGATTAGCAATTCGTAGGCAAACAATAACTTCTAATGCAAACAGACTTGAAAATGAAGATCACATAGTCAATGAACCCCCATCTGAAACAACGACTTTGCCAAAAAGAACAAGGGGCCCTACAAAGACGAAGACAATAGCCGTTGATAAACAACCTTGA

Coding sequence (CDS)

ATGTTGTATGACCACCTACTAAAAGAGGTAGGGGTCCAGAGGAAAAAATCAAATGCATCTAAACATGATAATGATAGTTTGCCTCTTCTGAATGACCACCCTAAATATTTCTCTCCCAATCCTAGTGAGAAGATAACTAAATGTAATCCTATTTTAATTCCTACATTAGACTCATCGGCTGCTCGAACAAGATTAGCAATTCGTAGGCAAACAATAACTTCTAATGCAAACAGACTTGAAAATGAAGATCACATAGTCAATGAACCCCCATCTGAAACAACGACTTTGCCAAAAAGAACAAGGGGCCCTACAAAGACGAAGACAATAGCCGTTGATAAACAACCTTGA

Protein sequence

MLYDHLLKEVGVQRKKSNASKHDNDSLPLLNDHPKYFSPNPSEKITKCNPILIPTLDSSAARTRLAIRRQTITSNANRLENEDHIVNEPPSETTTLPKRTRGPTKTKTIAVDKQP

Homology

[Close]

BLAST of Bhi02G000351 vs. NCBI nr
Match: KAA0032604.1 (Plant transposase [Cucumis melo var. makuwa] >TYK20881.1 Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 3.0e-14
Identity = 57/97 (58.76%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 33  HPKYFSPNPSEKITKCNPILIPTLDSSAARTRLAIRRQTITSNANRLEN----------- 92
           HPK  SP PSEKI + NPI    LDS AARTRLAIRRQ  TSN N  E            
Sbjct: 9   HPKCLSPKPSEKIVEGNPI----LDSPAARTRLAIRRQATTSNVNGFEEPPLETTTLPNE 68

Query: 93  ---EDHIVN-EPPSETTTLPKRTRGPTKTKTIAVDKQ 115
              ED +VN EPP E  TLPK+TRGPTK KTIAV+KQ
Sbjct: 69  KSVEDRVVNEEPPFEMMTLPKKTRGPTKMKTIAVEKQ 101

[Close]

BLAST of Bhi02G000351 vs. NCBI nr
Match: TYK13531.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 5.0e-14
Identity = 57/97 (58.76%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 33  HPKYFSPNPSEKITKCNPILIPTLDSSAARTRLAIRRQTITSNANRLEN----------- 92
           HP   SP PS KI + NPI    LDSSAARTRLAIRRQT TSN N  E            
Sbjct: 370 HPNTLSPKPSYKIVEGNPI----LDSSAARTRLAIRRQTTTSNVNGFEEPPLETITLPNE 429

Query: 93  ---EDHIVN-EPPSETTTLPKRTRGPTKTKTIAVDKQ 115
              EDH+V+ EPP ET TL K+TRGPTK KTIAV+KQ
Sbjct: 430 KAVEDHVVDEEPPFETMTLRKKTRGPTKMKTIAVEKQ 462

[Close]

BLAST of Bhi02G000351 vs. NCBI nr
Match: KAA0058414.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-13
Identity = 62/126 (49.21%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 14  RKKSNASKHDNDSLPLLND----------HPKYFSPNPSEKITKCNPILIPTLDSSAART 73
           +++S   K   DSL L N+          HP   SP PS+KI + NPI    LDS AART
Sbjct: 265 KRRSTRRKLIADSLLLPNEENMESSPIDVHPNTLSPKPSDKIVEGNPI----LDSPAART 324

Query: 74  RLAIRRQTITSNANRLEN--------------EDHIVN-EPPSETTTLPKRTRGPTKTKT 115
           RLAIRRQ  TSN N  E               EDH+V+ EPP ET TL K+TRGPTK KT
Sbjct: 325 RLAIRRQATTSNMNGFEEPPLETTTLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 384

[Close]

BLAST of Bhi02G000351 vs. NCBI nr
Match: KAA0060366.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-13
Identity = 55/97 (56.70%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 33  HPKYFSPNPSEKITKCNPILIPTLDSSAARTRLAIRRQTITSNANRLEN----------- 92
           HP   SP PS+KI + NPI    LDS AARTRLAIRRQ  TSN N  E            
Sbjct: 9   HPNTLSPKPSDKIVEGNPI----LDSPAARTRLAIRRQATTSNVNGFEEPQLETTTLPNE 68

Query: 93  ---EDHIVN-EPPSETTTLPKRTRGPTKTKTIAVDKQ 115
              EDH+V+ EPP ET TL K+TRGPTK KTIAV+KQ
Sbjct: 69  KAVEDHVVDEEPPFETMTLRKKTRGPTKMKTIAVEKQ 101

[Close]

BLAST of Bhi02G000351 vs. NCBI nr
Match: KAA0056210.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 3.3e-13
Identity = 62/126 (49.21%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 14  RKKSNASKHDNDSLPLLND----------HPKYFSPNPSEKITKCNPILIPTLDSSAART 73
           +K+S   K   DSL L N+          HP   S  PS+KI + NPI    LDS AART
Sbjct: 301 KKRSTRRKLIGDSLLLPNEENMESSPIDVHPNTLSSKPSDKIVEGNPI----LDSPAART 360

Query: 74  RLAIRRQTITSNANRLEN--------------EDHIVN-EPPSETTTLPKRTRGPTKTKT 115
           RLAIRRQ  TSN N  E               EDH+V+ EPP ET TL K+TRGPTK KT
Sbjct: 361 RLAIRRQATTSNVNGFEEPQLETTTLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 420

[Close]

BLAST of Bhi02G000351 vs. ExPASy TrEMBL
Match: A0A5A7SN57 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00120 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-14
Identity = 57/97 (58.76%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 33  HPKYFSPNPSEKITKCNPILIPTLDSSAARTRLAIRRQTITSNANRLEN----------- 92
           HPK  SP PSEKI + NPI    LDS AARTRLAIRRQ  TSN N  E            
Sbjct: 9   HPKCLSPKPSEKIVEGNPI----LDSPAARTRLAIRRQATTSNVNGFEEPPLETTTLPNE 68

Query: 93  ---EDHIVN-EPPSETTTLPKRTRGPTKTKTIAVDKQ 115
              ED +VN EPP E  TLPK+TRGPTK KTIAV+KQ
Sbjct: 69  KSVEDRVVNEEPPFEMMTLPKKTRGPTKMKTIAVEKQ 101

[Close]

BLAST of Bhi02G000351 vs. ExPASy TrEMBL
Match: A0A5D3CNY4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00040 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.4e-14
Identity = 57/97 (58.76%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 33  HPKYFSPNPSEKITKCNPILIPTLDSSAARTRLAIRRQTITSNANRLEN----------- 92
           HP   SP PS KI + NPI    LDSSAARTRLAIRRQT TSN N  E            
Sbjct: 370 HPNTLSPKPSYKIVEGNPI----LDSSAARTRLAIRRQTTTSNVNGFEEPPLETITLPNE 429

Query: 93  ---EDHIVN-EPPSETTTLPKRTRGPTKTKTIAVDKQ 115
              EDH+V+ EPP ET TL K+TRGPTK KTIAV+KQ
Sbjct: 430 KAVEDHVVDEEPPFETMTLRKKTRGPTKMKTIAVEKQ 462

[Close]

BLAST of Bhi02G000351 vs. ExPASy TrEMBL
Match: A0A5A7UTC4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G001270 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 9.3e-14
Identity = 62/126 (49.21%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 14  RKKSNASKHDNDSLPLLND----------HPKYFSPNPSEKITKCNPILIPTLDSSAART 73
           +++S   K   DSL L N+          HP   SP PS+KI + NPI    LDS AART
Sbjct: 265 KRRSTRRKLIADSLLLPNEENMESSPIDVHPNTLSPKPSDKIVEGNPI----LDSPAART 324

Query: 74  RLAIRRQTITSNANRLEN--------------EDHIVN-EPPSETTTLPKRTRGPTKTKT 115
           RLAIRRQ  TSN N  E               EDH+V+ EPP ET TL K+TRGPTK KT
Sbjct: 325 RLAIRRQATTSNMNGFEEPPLETTTLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 384

[Close]

BLAST of Bhi02G000351 vs. ExPASy TrEMBL
Match: A0A5A7V1K6 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001610 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 55/97 (56.70%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 33  HPKYFSPNPSEKITKCNPILIPTLDSSAARTRLAIRRQTITSNANRLEN----------- 92
           HP   SP PS+KI + NPI    LDS AARTRLAIRRQ  TSN N  E            
Sbjct: 9   HPNTLSPKPSDKIVEGNPI----LDSPAARTRLAIRRQATTSNVNGFEEPQLETTTLPNE 68

Query: 93  ---EDHIVN-EPPSETTTLPKRTRGPTKTKTIAVDKQ 115
              EDH+V+ EPP ET TL K+TRGPTK KTIAV+KQ
Sbjct: 69  KAVEDHVVDEEPPFETMTLRKKTRGPTKMKTIAVEKQ 101

[Close]

BLAST of Bhi02G000351 vs. ExPASy TrEMBL
Match: A0A5A7UM47 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00020 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13
Identity = 62/126 (49.21%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 14  RKKSNASKHDNDSLPLLND----------HPKYFSPNPSEKITKCNPILIPTLDSSAART 73
           +K+S   K   DSL L N+          HP   S  PS+KI + NPI    LDS AART
Sbjct: 301 KKRSTRRKLIGDSLLLPNEENMESSPIDVHPNTLSSKPSDKIVEGNPI----LDSPAART 360

Query: 74  RLAIRRQTITSNANRLEN--------------EDHIVN-EPPSETTTLPKRTRGPTKTKT 115
           RLAIRRQ  TSN N  E               EDH+V+ EPP ET TL K+TRGPTK KT
Sbjct: 361 RLAIRRQATTSNVNGFEEPQLETTTLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 420

The following BLAST results are available for this feature:

BLAST of Bhi02G000351 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi02G000351 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi02G000351 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032604.1	3.0e-14	58.76	Plant transposase [Cucumis melo var. makuwa] >TYK20881.1 Plant transposase [Cucu...	[more]
TYK13531.1	5.0e-14	58.76	putative TNP1-like transposon protein [Cucumis melo var. makuwa]	[more]
KAA0058414.1	1.9e-13	49.21	putative TNP1-like transposon protein [Cucumis melo var. makuwa]	[more]
KAA0060366.1	2.5e-13	56.70	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0056210.1	3.3e-13	49.21	integrase [Cucumis melo var. makuwa]	[more]

BLAST of Bhi02G000351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SN57	1.4e-14	58.76	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00...	[more]
A0A5D3CNY4	2.4e-14	58.76	Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7UTC4	9.3e-14	49.21	Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7V1K6	1.2e-13	56.70	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001...	[more]
A0A5A7UM47	1.6e-13	49.21	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00020 PE=4 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M000351	Bhi02M000351	mRNA