Bhi02G000346 (gene) Wax gourd (B227) v1

Overview


Name	Bhi02G000346
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	transcription factor MYB98-like
Location	chr2: 8630854 .. 8631377 (+)
RNA-Seq Expression	Bhi02G000346
Synteny	Bhi02G000346

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAACGATACAAGGAGTGAAGAAGAGGACAGAGTATTGATTGAAGCACATTCAGAAATAGGGAATAAATGGGCAGAAATTGCAAAGAGATTACCTGAAAGAACTGAAACTCTATTAAAAACCACTGGAATGCAACAAAGAGAAGGCAATATTCATAGCGAAAATGCAGATCCAAATATTCGAGATGCTTTCTTCTACAGGATAACATAAAGAGTCTGAATCTCGACTCCAATAACGTCACTCGCTACCAGAAGAAAAGCTCTGCCGTCACCTTCTCCGCCATCAACAATAATTCCAAATCAAAATTGGCCGATCATCATCATCATCAAGTACAAACTACTGATTTTTTCCCTAACCATTGGACGGTCACGAATTTTGATTTCAAGGAAGAACCAGAGTTTAATCTCGATGATAGTTTCTTCCCGAAAGGATGCCGCTTCAACTCGCTCATGGAGGATATTGTTGGCGCTTCTGTTGACGAAGCCAATAATGATGATCGGAAAAGATATAACGGGCAATGA

mRNA sequence

ATGCAGAACGATACAAGGAGTGAAGAAGAGGACAGAGATAACATAAAGAGTCTGAATCTCGACTCCAATAACGTCACTCGCTACCAGAAGAAAAGCTCTGCCGTCACCTTCTCCGCCATCAACAATAATTCCAAATCAAAATTGGCCGATCATCATCATCATCAAGTACAAACTACTGATTTTTTCCCTAACCATTGGACGGTCACGAATTTTGATTTCAAGGAAGAACCAGAGTTTAATCTCGATGATAGTTTCTTCCCGAAAGGATGCCGCTTCAACTCGCTCATGGAGGATATTGTTGGCGCTTCTGTTGACGAAGCCAATAATGATGATCGGAAAAGATATAACGGGCAATGA

Coding sequence (CDS)

ATGCAGAACGATACAAGGAGTGAAGAAGAGGACAGAGATAACATAAAGAGTCTGAATCTCGACTCCAATAACGTCACTCGCTACCAGAAGAAAAGCTCTGCCGTCACCTTCTCCGCCATCAACAATAATTCCAAATCAAAATTGGCCGATCATCATCATCATCAAGTACAAACTACTGATTTTTTCCCTAACCATTGGACGGTCACGAATTTTGATTTCAAGGAAGAACCAGAGTTTAATCTCGATGATAGTTTCTTCCCGAAAGGATGCCGCTTCAACTCGCTCATGGAGGATATTGTTGGCGCTTCTGTTGACGAAGCCAATAATGATGATCGGAAAAGATATAACGGGCAATGA

Protein sequence

MQNDTRSEEEDRDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLADHHHHQVQTTDFFPNHWTVTNFDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYNGQ

Homology

[Close]

BLAST of Bhi02G000346 vs. NCBI nr
Match: KAA0057864.1 (transcription factor MYB98-like [Cucumis melo var. makuwa] >TYJ98554.1 transcription factor MYB98-like [Cucumis melo var. makuwa])

HSP 1 Score: 166.0 bits (419), Expect = 2.0e-37
Identity = 85/109 (77.98%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLAD----HHHHQVQTTDFFPNHWT 71
           +D IKSLNLDSNN  R+QKKSSA   SA+NNN+KSK AD    HHHHQVQTTDF PN WT
Sbjct: 310 QDYIKSLNLDSNNAVRHQKKSSAAISSAVNNNTKSKSADHHHHHHHHQVQTTDFCPNDWT 369

Query: 72  VTNFDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           V +FDFKEEPEF LDDSFFP+GC  NSLMEDIVGASVDEANN DRKRYN
Sbjct: 370 VPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYN 418

[Close]

BLAST of Bhi02G000346 vs. NCBI nr
Match: XP_008453673.1 (PREDICTED: transcription factor MYB98-like [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 2.0e-37
Identity = 85/109 (77.98%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLAD----HHHHQVQTTDFFPNHWT 71
           +D IKSLNLDSNN  R+QKKSSA   SA+NNN+KSK AD    HHHHQVQTTDF PN WT
Sbjct: 312 QDYIKSLNLDSNNAVRHQKKSSAAISSAVNNNTKSKSADHHHHHHHHQVQTTDFCPNDWT 371

Query: 72  VTNFDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           V +FDFKEEPEF LDDSFFP+GC  NSLMEDIVGASVDEANN DRKRYN
Sbjct: 372 VPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYN 420

[Close]

BLAST of Bhi02G000346 vs. NCBI nr
Match: XP_031736862.1 (transcription factor MYB98 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 4.3e-37
Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLADHH-HHQVQTTDFFPNHWTVTN 71
           +D IKSLNLDSN   R+QKKSSA   SA+NNN+KSK ADHH HHQVQTTDF PN WTV +
Sbjct: 313 QDYIKSLNLDSNTAVRHQKKSSAAISSAVNNNNKSKSADHHYHHQVQTTDFCPNDWTVPD 372

Query: 72  FDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           FDFKEEPEF LDDSFFP+GC  NSLMEDIVGASVDEANN DRKRYN
Sbjct: 373 FDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYN 418

[Close]

BLAST of Bhi02G000346 vs. NCBI nr
Match: KGN63574.1 (hypothetical protein Csa_013746 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 4.3e-37
Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLADHH-HHQVQTTDFFPNHWTVTN 71
           +D IKSLNLDSN   R+QKKSSA   SA+NNN+KSK ADHH HHQVQTTDF PN WTV +
Sbjct: 311 QDYIKSLNLDSNTAVRHQKKSSAAISSAVNNNNKSKSADHHYHHQVQTTDFCPNDWTVPD 370

Query: 72  FDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           FDFKEEPEF LDDSFFP+GC  NSLMEDIVGASVDEANN DRKRYN
Sbjct: 371 FDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYN 416

[Close]

BLAST of Bhi02G000346 vs. NCBI nr
Match: XP_038879249.1 (transcription factor MYB98-like [Benincasa hispida])

HSP 1 Score: 154.8 bits (390), Expect = 4.5e-34
Identity = 79/106 (74.53%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLADHHHH-QVQTTDFFPNHWTVTN 71
           +D IKSLNL+SNN  R+QKKSS  T SA+NNNSKSK  +HHHH QVQTT+F PN WTV +
Sbjct: 252 QDYIKSLNLNSNNAARHQKKSSGATSSAVNNNSKSKSTNHHHHNQVQTTNFCPNDWTVPD 311

Query: 72  FDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           FDFKEEPE  LDDSFFP+GC  NSLMEDIV ASVDEANN DR+RYN
Sbjct: 312 FDFKEEPEIYLDDSFFPEGCSTNSLMEDIVAASVDEANNYDRERYN 357

[Close]

BLAST of Bhi02G000346 vs. ExPASy TrEMBL
Match: A0A5D3BHK8 (Transcription factor MYB98-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001700 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.5e-38
Identity = 85/109 (77.98%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLAD----HHHHQVQTTDFFPNHWT 71
           +D IKSLNLDSNN  R+QKKSSA   SA+NNN+KSK AD    HHHHQVQTTDF PN WT
Sbjct: 310 QDYIKSLNLDSNNAVRHQKKSSAAISSAVNNNTKSKSADHHHHHHHHQVQTTDFCPNDWT 369

Query: 72  VTNFDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           V +FDFKEEPEF LDDSFFP+GC  NSLMEDIVGASVDEANN DRKRYN
Sbjct: 370 VPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYN 418

[Close]

BLAST of Bhi02G000346 vs. ExPASy TrEMBL
Match: A0A1S3BWA8 (transcription factor MYB98-like OS=Cucumis melo OX=3656 GN=LOC103494322 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.5e-38
Identity = 85/109 (77.98%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLAD----HHHHQVQTTDFFPNHWT 71
           +D IKSLNLDSNN  R+QKKSSA   SA+NNN+KSK AD    HHHHQVQTTDF PN WT
Sbjct: 312 QDYIKSLNLDSNNAVRHQKKSSAAISSAVNNNTKSKSADHHHHHHHHQVQTTDFCPNDWT 371

Query: 72  VTNFDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           V +FDFKEEPEF LDDSFFP+GC  NSLMEDIVGASVDEANN DRKRYN
Sbjct: 372 VPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYN 420

[Close]

BLAST of Bhi02G000346 vs. ExPASy TrEMBL
Match: A0A0A0LRG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004900 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.1e-37
Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLADHH-HHQVQTTDFFPNHWTVTN 71
           +D IKSLNLDSN   R+QKKSSA   SA+NNN+KSK ADHH HHQVQTTDF PN WTV +
Sbjct: 311 QDYIKSLNLDSNTAVRHQKKSSAAISSAVNNNNKSKSADHHYHHQVQTTDFCPNDWTVPD 370

Query: 72  FDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           FDFKEEPEF LDDSFFP+GC  NSLMEDIVGASVDEANN DRKRYN
Sbjct: 371 FDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYN 416

[Close]

BLAST of Bhi02G000346 vs. ExPASy TrEMBL
Match: A0A6J1JEG6 (transcription factor MYB98-like OS=Cucurbita maxima OX=3661 GN=LOC111485058 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30
Identity = 75/105 (71.43%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLADHHHHQVQTTDFFPNHWTVTNF 71
           +D IKSLNLDS    R+QKKSSA   SA+ NN+KSK+ADHHHHQ QTT+F PN WTV NF
Sbjct: 313 QDYIKSLNLDS-VAARHQKKSSAT--SAV-NNTKSKVADHHHHQTQTTEFCPNDWTVPNF 372

Query: 72  DFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           DFK+EPE  LDDSFFP+GC  NSL+EDI GA VD+ANN DRKRYN
Sbjct: 373 DFKDEPEIYLDDSFFPEGCSINSLVEDIAGAYVDDANNYDRKRYN 413

[Close]

BLAST of Bhi02G000346 vs. ExPASy TrEMBL
Match: A0A6J1E0A8 (transcription factor MYB98-like OS=Cucurbita moschata OX=3662 GN=LOC111429667 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.4e-28
Identity = 74/106 (69.81%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 12  RDNIKSLNLDSNNVTRYQKKSSAVTFSAINNNSKSKLADH-HHHQVQTTDFFPNHWTVTN 71
           +D IKSLNLD+    R+QKKSSA   SA+ NN+KSK+ DH HHHQ Q T+F PN WTV N
Sbjct: 313 QDYIKSLNLDT-VAARHQKKSSAT--SAV-NNTKSKVTDHRHHHQAQITEFCPNDWTVPN 372

Query: 72  FDFKEEPEFNLDDSFFPKGCRFNSLMEDIVGASVDEANNDDRKRYN 117
           FDFK+EPE  LDDSFFP+GC  NSLMEDI GASVD+ANN DRKRYN
Sbjct: 373 FDFKDEPEIYLDDSFFPEGCSINSLMEDIAGASVDDANNYDRKRYN 414

The following BLAST results are available for this feature:

BLAST of Bhi02G000346 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi02G000346 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi02G000346 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057864.1	2.0e-37	77.98	transcription factor MYB98-like [Cucumis melo var. makuwa] >TYJ98554.1 transcrip...	[more]
XP_008453673.1	2.0e-37	77.98	PREDICTED: transcription factor MYB98-like [Cucumis melo]	[more]
XP_031736862.1	4.3e-37	79.25	transcription factor MYB98 [Cucumis sativus]	[more]
KGN63574.1	4.3e-37	79.25	hypothetical protein Csa_013746 [Cucumis sativus]	[more]
XP_038879249.1	4.5e-34	74.53	transcription factor MYB98-like [Benincasa hispida]	[more]

BLAST of Bhi02G000346 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHK8	9.5e-38	77.98	Transcription factor MYB98-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BWA8	9.5e-38	77.98	transcription factor MYB98-like OS=Cucumis melo OX=3656 GN=LOC103494322 PE=4 SV=...	[more]
A0A0A0LRG5	2.1e-37	79.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004900 PE=4 SV=1	[more]
A0A6J1JEG6	2.5e-30	71.43	transcription factor MYB98-like OS=Cucurbita maxima OX=3661 GN=LOC111485058 PE=4...	[more]
A0A6J1E0A8	1.4e-28	69.81	transcription factor MYB98-like OS=Cucurbita moschata OX=3662 GN=LOC111429667 PE...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M000346	Bhi02M000346	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding