Bhi01G002892 (gene) Wax gourd (B227) v1

Overview
NameBhi01G002892
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr1: 95630366 .. 95630669 (+)
RNA-Seq ExpressionBhi01G002892
SyntenyBhi01G002892
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGACCCTTCTTTCCCGTTTCATCAAGGAATGGAAAGTCGCACTCGTCTCTCTGGGGGGCCGCGCCCTCTCTTCTTTTTTGATATATAGTGGATGCTCCGGCGGTGTGGCTTTGGCCATTGGCTTTAGCCAAGAAAAAGGCGAGTTAAGGACGCAGAAAGAAAGGAGGCTGCTGATCAAGAAGCAAAAATGGCTGCATACGAGTAAGCCCACTTTGGTCGCAGCAGGAGCTGCGGGCAAGTGCTTGGTAGGCCAACAGCCTAGTGAACCGGGTGGGGCACTCGATGAAAGGAGGGCACATTGA

mRNA sequence

GTGGACCCTTCTTTCCCGTTTCATCAAGGAATGGAAAGTCGCACTCGTCTCTCTGGGGGGCCGCGCCCTCTCTTCTTTTTTGATATATAGTGGATGCTCCGGCGGTGTGGCTTTGGCCATTGGCTTTAGCCAAGAAAAAGGCGAGTTAAGGACGCAGAAAGAAAGGAGGCTGCTGATCAAGAAGCAAAAATGGCTGCATACGAGTAAGCCCACTTTGGTCGCAGCAGGAGCTGCGGGCAAGTGCTTGGTAGGCCAACAGCCTAGTGAACCGGGTGGGGCACTCGATGAAAGGAGGGCACATTGA

Coding sequence (CDS)

GTGGACCCTTCTTTCCCGTTTCATCAAGGAATGGAAAGTCGCACTCGTCTCTCTGGGGGGCCGCGCCCTCTCTTCTTTTTTGATATATAGTGGATGCTCCGGCGGTGTGGCTTTGGCCATTGGCTTTAGCCAAGAAAAAGGCGAGTTAAGGACGCAGAAAGAAAGGAGGCTGCTGATCAAGAAGCAAAAATGGCTGCATACGAGTAAGCCCACTTTGGTCGCAGCAGGAGCTGCGGGCAAGTGCTTGGTAGGCCAACAGCCTAGTGAACCGGGTGGGGCACTCGATGAAAGGAGGGCACATTGA

Protein sequence

WTLLSRFIKEWKVALVSLGGRALSSFLIYSGCSGGVALAIGFSQEKGELRTQKERRLLIKKQKWLHTSKPTLVAAGAAGKCLVGQQPSEPGGALDERRAH
Homology
[Close]
BLAST of Bhi01G002892 vs. NCBI nr
Match: ERM95896.1 (hypothetical protein AMTR_s00060p00157590 [Amborella trichopoda])

HSP 1 Score: 55.1 bits (131), Expect = 4.1e-04
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 67  TSKPTLVAAGAAGKCLVGQQPSEPGGALDERRAH 101
           ++ P    AGAAGKCLVGQQPSEPGGALDER AH
Sbjct: 16  SAPPAKRPAGAAGKCLVGQQPSEPGGALDERGAH 49

[Close]
BLAST of Bhi01G002892 vs. ExPASy TrEMBL
Match: W1NKA0 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00060p00157590 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.0e-04
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 67  TSKPTLVAAGAAGKCLVGQQPSEPGGALDERRAH 101
           ++ P    AGAAGKCLVGQQPSEPGGALDER AH
Sbjct: 16  SAPPAKRPAGAAGKCLVGQQPSEPGGALDERGAH 49

[Close]
BLAST of Bhi01G002892 vs. ExPASy TrEMBL
Match: A0A166E1Y5 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_006817 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.9e-04
Identity = 25/28 (89.29%), Postives = 25/28 (89.29%), Query Frame = 0 

Query: 70 PTLVAAGAAGKCLVGQQPSEPGGALDER 98
          P   AAGAAGKCLVGQQPSEPGGALDER
Sbjct: 21 PAKRAAGAAGKCLVGQQPSEPGGALDER 48

The following BLAST results are available for this feature:
BLAST of Bhi01G002892 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi01G002892 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi01G002892 vs. NCBI nr
Match NameE-valueIdentityDescription
ERM95896.14.1e-0476.47hypothetical protein AMTR_s00060p00157590 [Amborella trichopoda][more]
BLAST of Bhi01G002892 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
W1NKA02.0e-0476.47Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00060p00157590... [more]
A0A166E1Y59.9e-0489.29Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_006817 ... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M002892Bhi01M002892mRNA