Bhi01G002812 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G002812
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	U11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
Location	chr1: 91873665 .. 91875667 (-)
RNA-Seq Expression	Bhi01G002812
Synteny	Bhi01G002812

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACCATTTCTACTCACTCAGAGAGGACTAAGATCGGTAACTTATGGCGTTTCAGCCGCTTCGTTGATTACCGGTGTTTGGCTCCGCCGCCTACGCTCGACATTGATGCTGATTTTCGCGCTCTCAGCCGGAGGCCTTATCGTTTGCTTCCTCGACAGGATCTCATCGATCTCTTCGTCTTGAAGCTCGACGGTTCTGTATTTGGTGATTCCTTCCCCGTTTTTTACATTTTCTTTTTCTTCTTTTACTTCTTGTAAGACGTGAGAAGAGAATCTGTCTTCAATGAAGTTTCTGTCGGTTTGCTGGTGGTTGAGATGGAAAATGGAAGATGAAAGATGAAAGATTAAAGATGGATGGAAACTGGCAAGTGCTTTAGAGAATGTAATGGAGTGCTTTCTTGAGAACACTGTAGCGGGAAAAGCCGTTTTAAAAAGAGTAGTTAATTGAAGTGTTGTGGCTTGTGGCGACTATGGTTAAGGAAAATGCAACAACAATATGTTTACATGTCGCGATTCTTTATTTTGTGGCATTTTTCTCCTGCTTTAATTATAGATGTGGAGATCATGTGTGGTAGTGTGAAAATAACCAAATATTTAATTTGAACCTACTTGTTCTTTATATTGCAGGAATATAATTGCAGTCTTAACCACAAATTAAACATGGTTTGGCTTTCCAGGTATTCGTGTATCACGCAATGCTACAGTCGCAGATCTTAAACGAGCGATAGAGGAAGTTTTTGATTCACCCGGGGGGAGTGAACATTGCAAGATTACATGGTACTTGGTAGTATACTAGTATTATTAACCATGTTATGAGACTTATGACTAATTTTATCGCTGATGATTTTGTTTTTGTTCCTTTAGTTTTGTAATTTTATTGGGTTTTACATGAGTGTTGATTTGTCTATTTTCCACCACATTAACTGTTACTGGATGTATATGCTGTTAGGTCACTTATCTGGGGACATTTCTGCTTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGACATGCATTAGAGTTTTTGGGATTAAAGATGGTGATCAGGTGTGCGAATTTTGTGATGTCTCTCTTGCTTGTTCATTGAATCAAATGCTGGCTCTGCTTTCTAGCTTTTAATGTTTTTCCCTGTTGTCATATGCAGCTTCAGTTTCTTAGGCATATGTCTATCAATTGTTTACCGGTGAAGAGAGATGGGAAGAACCAAAGTGTTTCTTGCAAAACAATGCTGTCGTAAGTTGTTATTTCTTATGGCTGCTGTAGCATATGGTGATTTCTAAGTTGTTTTTTTAATGGCTGCACTAGAACATGCATAAATATTGCACGGGCAAATACCATTCTCTTTTCTGAACACAATTCTTCAATTTGATGCCTTGTTTGAAGTCCCATTGAGCAAGTGGCAGTCTACAAATTATGCAAACTGTATGATTTTGCGAGCCTCCCCTAGGTTTGGAGAGGGGAGTCAACATATATATTACTTTCTAGATTATTCCAAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAATCCCAGAATGAAATTTCCATTGTTTTTATTATACAGTGTCAGAAGGGGAGTTATCATCTCTGTTGCATTTCTCACTATTAGATTAGTCTAGACTTAACATTTATTTAGTAACAGGACAACATAGTTCAATATGAAGGAAAATTTCTCAACATGTTCTTTCTGCAATGAACAGTCGATGGTATATTCTTGCACTGTTCTATAAGATAGTAAACTTATACTTTCCATAAAAGTCTCTCGCCAGAATCAAAATCTGTTGAAGAGAATCAACCAGCTGGTCAAGATGATCTCGAGAATTATCAAGTTCACAGGGGCGGTTCAAATCAAGAGGAGGTTGTTTCTATGGGTAGAGCTGGATTTCAGCTAGCAAATTTCTTCAGAGGACGGGTATTATATTCCAGGATATGGGGTTTTCGTAAGAGTGCATCAGAAGGCAGGAATAGGCCTTCCTCTGGTTTTCGCATTACTTGA

mRNA sequence

ATGCCAACCATTTCTACTCACTCAGAGAGGACTAAGATCGGTAACTTATGGCGTTTCAGCCGCTTCGTTGATTACCGGTGTTTGGCTCCGCCGCCTACGCTCGACATTGATGCTGATTTTCGCGCTCTCAGCCGGAGGCCTTATCGTTTGCTTCCTCGACAGGATCTCATCGATCTCTTCGTCTTGAAGCTCGACGGTTCTGTATTTGGTATTCGTGTATCACGCAATGCTACAGTCGCAGATCTTAAACGAGCGATAGAGGAAGTTTTTGATTCACCCGGGGGGAGTGAACATTGCAAGATTACATGGTCACTTATCTGGGGACATTTCTGCTTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGACATGCATTAGAGTTTTTGGGATTAAAGATGGTGATCAGCTTCAGTTTCTTAGGCATATGTCTATCAATTGTTTACCGGTGAAGAGAGATGGGAAGAACCAAAGTGTTTCTTGCAAAACAATGCTGTCTCTCTCGCCAGAATCAAAATCTGTTGAAGAGAATCAACCAGCTGGTCAAGATGATCTCGAGAATTATCAAGTTCACAGGGGCGGTTCAAATCAAGAGGAGGTTGTTTCTATGGGTAGAGCTGGATTTCAGCTAGCAAATTTCTTCAGAGGACGGGTATTATATTCCAGGATATGGGGTTTTCGTAAGAGTGCATCAGAAGGCAGGAATAGGCCTTCCTCTGGTTTTCGCATTACTTGA

Coding sequence (CDS)

ATGCCAACCATTTCTACTCACTCAGAGAGGACTAAGATCGGTAACTTATGGCGTTTCAGCCGCTTCGTTGATTACCGGTGTTTGGCTCCGCCGCCTACGCTCGACATTGATGCTGATTTTCGCGCTCTCAGCCGGAGGCCTTATCGTTTGCTTCCTCGACAGGATCTCATCGATCTCTTCGTCTTGAAGCTCGACGGTTCTGTATTTGGTATTCGTGTATCACGCAATGCTACAGTCGCAGATCTTAAACGAGCGATAGAGGAAGTTTTTGATTCACCCGGGGGGAGTGAACATTGCAAGATTACATGGTCACTTATCTGGGGACATTTCTGCTTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGACATGCATTAGAGTTTTTGGGATTAAAGATGGTGATCAGCTTCAGTTTCTTAGGCATATGTCTATCAATTGTTTACCGGTGAAGAGAGATGGGAAGAACCAAAGTGTTTCTTGCAAAACAATGCTGTCTCTCTCGCCAGAATCAAAATCTGTTGAAGAGAATCAACCAGCTGGTCAAGATGATCTCGAGAATTATCAAGTTCACAGGGGCGGTTCAAATCAAGAGGAGGTTGTTTCTATGGGTAGAGCTGGATTTCAGCTAGCAAATTTCTTCAGAGGACGGGTATTATATTCCAGGATATGGGGTTTTCGTAAGAGTGCATCAGAAGGCAGGAATAGGCCTTCCTCTGGTTTTCGCATTACTTGA

Protein sequence

MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLFVLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLIDDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPAGQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSGFRIT

Homology

[Close]

BLAST of Bhi01G002812 vs. TAIR 10
Match: AT1G80060.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 5.4e-32
Identity = 75/198 (37.88%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 45  RRPYRLLPRQDLIDLFVLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWS 104
           R  Y  LP Q  I L V+KL+GS+F + V+++ +VA+LKRA+E+VF       H  I+WS
Sbjct: 41  RSSYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLEGHGMISWS 100

Query: 105 LIWGHFCLCYEGEKLIDDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTM 164
            +WGHFCLCY  ++L++DKT IR  G+ DGDQL F+RH+SI+  P+ +  +++S SCK  
Sbjct: 101 HVWGHFCLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHLSIDHSPMNK--RSKSPSCKRY 160

Query: 165 LSLSPES----KSVEENQPAGQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLY 224
           L L   S      ++     G DD+   + + G  ++     +  A  +L N  +G + Y
Sbjct: 161 LELDVSSIVNEIQIQNQNQNGVDDVAE-KCYPGAQDE-----LPAAESRLVNLIKGWLPY 220

Query: 225 SRIWGFRKSASEGRNRPS 239
           +  WG  +   E R+ PS
Sbjct: 221 AGRWGVSRKGPECRSGPS 230

[Close]

BLAST of Bhi01G002812 vs. TAIR 10
Match: AT4G32270.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-23
Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 48  YRLLPRQDLIDLFVLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIW 107
           Y  +P ++ I L VLKLDGS FGI+V + ATV +LK A+E  F     S   KI+W  +W
Sbjct: 30  YNQMP-EEPIKLTVLKLDGSSFGIQVLKTATVGELKMAVEAAFSHLPISGPGKISWPHVW 89

Query: 108 GHFCLCYEGEKLIDDKTCIRVFGIKDGDQLQFLRHMSINC-LPVKRDGKNQSVSCKTMLS 167
           G FCL YE ++LI++   +  FGIKDGDQL+F+RH+S  C L VK   K   VS    L 
Sbjct: 90  GQFCLSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSKTPRVSSFKQLK 149

Query: 168 L---SPESK 173
           L   +PE++
Sbjct: 150 LFSTTPETR 157

[Close]

BLAST of Bhi01G002812 vs. TAIR 10
Match: AT5G25340.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21
Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 48  YRLLPRQDLIDLFVLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIW 107
           Y  LP +  I L VLKLDGS F + V  +ATV DLK AIE  F         KI+WS +W
Sbjct: 11  YDKLPNEP-IRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGPSKISWSHVW 70

Query: 108 GHFCLCYEGEKLIDDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSL 167
           GHFCLC+ G+KLI D  CI  +G+KDGD+++F  H+S N +  K  G ++    K +  +
Sbjct: 71  GHFCLCFGGQKLITDTDCIGNYGMKDGDEVRFKNHVSGNAVLSK--GYSRKSKQKNLERV 130

Query: 168 SPESKSVEENQPAGQDDLENYQVHRGG 195
            P+      N+    DD  +  + RGG
Sbjct: 131 LPKDGDEVLNRIEEIDDSWD-DLERGG 153

[Close]

BLAST of Bhi01G002812 vs. TAIR 10
Match: AT4G32270.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-20
Identity = 56/123 (45.53%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 54  QDLIDLFVLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLC 113
           ++ I L VLKLDGS F   V + ATV +LK A+E  F     S   KI+W  +WG FCL 
Sbjct: 3   EEPIKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFCLS 62

Query: 114 YEGEKLIDDKTCIRVFGIKDGDQLQFLRHMSINC-LPVKRDGKNQSVSCKTMLSL---SP 173
           YE ++LI++   +  FGIKDGDQL+F+RH+S  C L VK   K   VS    L L   +P
Sbjct: 63  YEDKRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSKTPRVSSFKQLKLFSTTP 122

[Close]

BLAST of Bhi01G002812 vs. TAIR 10
Match: AT3G07860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-11
Identity = 31/95 (32.63%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 51  LPRQDLIDLFVLKLDGSVFGIRVSRNATVADLKRAIEEVFD--SPGGSEHCKITWSLIWG 110
           L +   + L V+KLDGS   + V  +AT+ DLK  I++  +        H  I+W  +W 
Sbjct: 46  LEKGSAMRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWS 105

Query: 111 HFCLCYEGEKLIDDKTCIRVFGIKDGDQLQFLRHM 144
           +FCL    EKL+DD   ++  GI++  Q+ F+ ++
Sbjct: 106 NFCLSCNNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140

[Close]

BLAST of Bhi01G002812 vs. ExPASy Swiss-Prot
Match: Q3ZBQ4 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVF----DSPGGSEHCKITWSLIWGHFCLCYEG 120
           V K+DG V  + V +NATV DLK+AI+       +  GG +H  I+WS +W  + L   G
Sbjct: 36  VCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQH--ISWSYVWRTYHLTSAG 95

Query: 121 EKLIDDKTCIRVFGIKDGDQLQFLRHM 144
           EKL +D+  +R +GI++ D++ F++ +
Sbjct: 96  EKLTEDRKKLRDYGIRNRDEVSFIKKL 120

[Close]

BLAST of Bhi01G002812 vs. ExPASy Swiss-Prot
Match: Q8VIK1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVF----DSPGGSEHCKITWSLIWGHFCLCYEG 120
           V K+DG V  + V +NATV DLK+AI+       +  GG +H  I+WS +W  + L   G
Sbjct: 36  VCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQH--ISWSYVWRTYHLTSAG 95

Query: 121 EKLIDDKTCIRVFGIKDGDQLQFLRHM 144
           EKL +D+  +R +GI++ D++ F++ +
Sbjct: 96  EKLTEDRKKLRDYGIRNRDEVSFIKKL 120

[Close]

BLAST of Bhi01G002812 vs. ExPASy Swiss-Prot
Match: Q9BV90 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.4e-10
Identity = 32/87 (36.78%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVF----DSPGGSEHCKITWSLIWGHFCLCYEG 120
           V K+DG V  + V ++ATV DLK+AI+       +  GG +H  I+WS +W  + L   G
Sbjct: 45  VCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQH--ISWSYVWRTYHLTSAG 104

Query: 121 EKLIDDKTCIRVFGIKDGDQLQFLRHM 144
           EKL +D+  +R +GI++ D++ F++ +
Sbjct: 105 EKLTEDRKKLRDYGIRNRDEVSFIKKL 129

[Close]

BLAST of Bhi01G002812 vs. ExPASy Swiss-Prot
Match: Q84WS8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.7e-10
Identity = 31/95 (32.63%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 51  LPRQDLIDLFVLKLDGSVFGIRVSRNATVADLKRAIEEVFD--SPGGSEHCKITWSLIWG 110
           L +   + L V+KLDGS   + V  +AT+ DLK  I++  +        H  I+W  +W 
Sbjct: 46  LEKGSAMRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWS 105

Query: 111 HFCLCYEGEKLIDDKTCIRVFGIKDGDQLQFLRHM 144
           +FCL    EKL+DD   ++  GI++  Q+ F+ ++
Sbjct: 106 NFCLSCNNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140

[Close]

BLAST of Bhi01G002812 vs. NCBI nr
Match: XP_038904269.1 (uncharacterized protein LOC120090621 isoform X1 [Benincasa hispida])

HSP 1 Score: 507.7 bits (1306), Expect = 5.7e-140
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF
Sbjct: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI
Sbjct: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA
Sbjct: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180

Query: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240
           GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG
Sbjct: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240

Query: 241 FRIT 245
           FRIT
Sbjct: 241 FRIT 244

[Close]

BLAST of Bhi01G002812 vs. NCBI nr
Match: XP_008454172.1 (PREDICTED: uncharacterized protein LOC103494657 isoform X1 [Cucumis melo])

HSP 1 Score: 406.4 bits (1043), Expect = 1.8e-109
Identity = 194/243 (79.84%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           MPT S HS+RTKI NLWRF+RF+DYRC A PPTLD + D  ALSRRPYRLLPRQDLIDLF
Sbjct: 1   MPTSSPHSDRTKIANLWRFTRFIDYRCFA-PPTLDFNPDSDALSRRPYRLLPRQDLIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFG+RVSRN+TVADLKRAIEEVFDSPGGSEH KITWSLIWGHFCLCYEGEKL 
Sbjct: 61  VLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLT 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDK CIR + IKDGDQLQF+RHMSINCL +K+D KNQ+V CKT+L  SPESK+VEENQ  
Sbjct: 121 DDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQAD 180

Query: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240
           G+DD+++YQVHR  SNQEEV SM RA FQL+NFF+GRVLYSR+WGF KSASEGRNR SS 
Sbjct: 181 GRDDIKDYQVHRDDSNQEEVASMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSA 240

Query: 241 FRI 244
           FRI
Sbjct: 241 FRI 242

[Close]

BLAST of Bhi01G002812 vs. NCBI nr
Match: XP_004152330.1 (uncharacterized protein LOC101206096 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 3.0e-109
Identity = 196/243 (80.66%), Postives = 213/243 (87.65%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           MPT S   +RTKI NLWRF+RF+DYRC A PPTLD D D  ALSRRPYRLLPRQD IDLF
Sbjct: 1   MPTSSPRPDRTKIANLWRFTRFIDYRCFA-PPTLDFDPDSDALSRRPYRLLPRQDHIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFGIRVSRN+TVADLKRAIE+VFDSPGGSEH KITWSLIWGHFCLCYEGEKLI
Sbjct: 61  VLKLDGSVFGIRVSRNSTVADLKRAIEKVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLI 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDKTCI+ +GIKDGDQLQF+RHMSINCL +K+D KNQ+V CK ML LSPESK+VEENQ  
Sbjct: 121 DDKTCIKGYGIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKAMLFLSPESKAVEENQAD 180

Query: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240
           GQDD ++YQVHR  SN+EEV S+ RAGFQLAN F+GRVLYSRIWGF KSASEGRNR SS 
Sbjct: 181 GQDDFKDYQVHRDDSNREEVASVARAGFQLANLFKGRVLYSRIWGFCKSASEGRNRASSA 240

Query: 241 FRI 244
           FRI
Sbjct: 241 FRI 242

[Close]

BLAST of Bhi01G002812 vs. NCBI nr
Match: XP_022948349.1 (uncharacterized protein LOC111452053 [Cucurbita moschata] >KAG7036517.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-100
Identity = 187/244 (76.64%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           M  I    ER+KIGNLWRF+RF+D RCLA P TLD D D  AL RRPYRLLPR +LIDLF
Sbjct: 1   MRRIGGPRERSKIGNLWRFNRFIDNRCLA-PLTLDGDGDVDALRRRPYRLLPRLELIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFG+RV+RN TVADLK+AIEEVFDSPG SEHCKITWSL+WGHFCLCYEGEKLI
Sbjct: 61  VLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLI 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDK  IRV GIKDGDQLQF+RHMSINCLP+KRD KNQ+V CKT+L L  ESKS+E NQ A
Sbjct: 121 DDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVA 180

Query: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240
           GQ D  NY+VH  GSNQEE+     AGFQLAN FRGRVLYS+IWGF +SASEGRNRPSSG
Sbjct: 181 GQGDPVNYEVHEDGSNQEEI---PMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSG 240

Query: 241 FRIT 245
           F IT
Sbjct: 241 FCIT 240

[Close]

BLAST of Bhi01G002812 vs. NCBI nr
Match: XP_022153470.1 (uncharacterized protein LOC111020973 isoform X1 [Momordica charantia] >XP_022153471.1 uncharacterized protein LOC111020973 isoform X1 [Momordica charantia])

HSP 1 Score: 376.7 bits (966), Expect = 1.5e-100
Identity = 190/245 (77.55%), Postives = 206/245 (84.08%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           MP I    ER+KIGNLWRF+RF+D RCLA PPTLD D D  ALSR PYRLLPRQDLIDLF
Sbjct: 1   MPRIGGR-ERSKIGNLWRFNRFIDTRCLA-PPTLDGDGDVDALSRMPYRLLPRQDLIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFG+RV+RN TVA+LKRAIEEVF SPGG EHCKITWSL+WGHFCLCYEG+ LI
Sbjct: 61  VLKLDGSVFGVRVARNGTVAELKRAIEEVFVSPGGDEHCKITWSLVWGHFCLCYEGQNLI 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDK CIRVFGIKDGDQLQF+RHMSI+CLPVKRD K+Q+VSC+T+L L PESK VE+NQ A
Sbjct: 121 DDKACIRVFGIKDGDQLQFIRHMSISCLPVKRDRKSQTVSCRTVLFLPPESKCVEDNQLA 180

Query: 181 GQDDLENY-QVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSS 240
           G DD E Y +VH  GSNQEEV      GF LANFFRGR LYSRIWGF KSASEGRNRP S
Sbjct: 181 GPDDPETYEEVHEDGSNQEEVPI---PGFHLANFFRGRFLYSRIWGFLKSASEGRNRP-S 239

Query: 241 GFRIT 245
           GF IT
Sbjct: 241 GFGIT 239

[Close]

BLAST of Bhi01G002812 vs. ExPASy TrEMBL
Match: A0A1S3BY00 (uncharacterized protein LOC103494657 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494657 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 8.6e-110
Identity = 194/243 (79.84%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           MPT S HS+RTKI NLWRF+RF+DYRC A PPTLD + D  ALSRRPYRLLPRQDLIDLF
Sbjct: 1   MPTSSPHSDRTKIANLWRFTRFIDYRCFA-PPTLDFNPDSDALSRRPYRLLPRQDLIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFG+RVSRN+TVADLKRAIEEVFDSPGGSEH KITWSLIWGHFCLCYEGEKL 
Sbjct: 61  VLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLT 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDK CIR + IKDGDQLQF+RHMSINCL +K+D KNQ+V CKT+L  SPESK+VEENQ  
Sbjct: 121 DDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQAD 180

Query: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240
           G+DD+++YQVHR  SNQEEV SM RA FQL+NFF+GRVLYSR+WGF KSASEGRNR SS 
Sbjct: 181 GRDDIKDYQVHRDDSNQEEVASMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSA 240

Query: 241 FRI 244
           FRI
Sbjct: 241 FRI 242

[Close]

BLAST of Bhi01G002812 vs. ExPASy TrEMBL
Match: A0A0A0KTJ1 (Ubiquitin_4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006470 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.5e-109
Identity = 196/243 (80.66%), Postives = 213/243 (87.65%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           MPT S   +RTKI NLWRF+RF+DYRC A PPTLD D D  ALSRRPYRLLPRQD IDLF
Sbjct: 1   MPTSSPRPDRTKIANLWRFTRFIDYRCFA-PPTLDFDPDSDALSRRPYRLLPRQDHIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFGIRVSRN+TVADLKRAIE+VFDSPGGSEH KITWSLIWGHFCLCYEGEKLI
Sbjct: 61  VLKLDGSVFGIRVSRNSTVADLKRAIEKVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLI 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDKTCI+ +GIKDGDQLQF+RHMSINCL +K+D KNQ+V CK ML LSPESK+VEENQ  
Sbjct: 121 DDKTCIKGYGIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKAMLFLSPESKAVEENQAD 180

Query: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240
           GQDD ++YQVHR  SN+EEV S+ RAGFQLAN F+GRVLYSRIWGF KSASEGRNR SS 
Sbjct: 181 GQDDFKDYQVHRDDSNREEVASVARAGFQLANLFKGRVLYSRIWGFCKSASEGRNRASSA 240

Query: 241 FRI 244
           FRI
Sbjct: 241 FRI 242

[Close]

BLAST of Bhi01G002812 vs. ExPASy TrEMBL
Match: A0A6J1G9M5 (uncharacterized protein LOC111452053 OS=Cucurbita moschata OX=3662 GN=LOC111452053 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.6e-101
Identity = 187/244 (76.64%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           M  I    ER+KIGNLWRF+RF+D RCLA P TLD D D  AL RRPYRLLPR +LIDLF
Sbjct: 1   MRRIGGPRERSKIGNLWRFNRFIDNRCLA-PLTLDGDGDVDALRRRPYRLLPRLELIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFG+RV+RN TVADLK+AIEEVFDSPG SEHCKITWSL+WGHFCLCYEGEKLI
Sbjct: 61  VLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLI 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDK  IRV GIKDGDQLQF+RHMSINCLP+KRD KNQ+V CKT+L L  ESKS+E NQ A
Sbjct: 121 DDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVA 180

Query: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240
           GQ D  NY+VH  GSNQEE+     AGFQLAN FRGRVLYS+IWGF +SASEGRNRPSSG
Sbjct: 181 GQGDPVNYEVHEDGSNQEEI---PMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSG 240

Query: 241 FRIT 245
           F IT
Sbjct: 241 FCIT 240

[Close]

BLAST of Bhi01G002812 vs. ExPASy TrEMBL
Match: A0A6J1DGY1 (uncharacterized protein LOC111020973 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020973 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.3e-101
Identity = 190/245 (77.55%), Postives = 206/245 (84.08%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           MP I    ER+KIGNLWRF+RF+D RCLA PPTLD D D  ALSR PYRLLPRQDLIDLF
Sbjct: 1   MPRIGGR-ERSKIGNLWRFNRFIDTRCLA-PPTLDGDGDVDALSRMPYRLLPRQDLIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFG+RV+RN TVA+LKRAIEEVF SPGG EHCKITWSL+WGHFCLCYEG+ LI
Sbjct: 61  VLKLDGSVFGVRVARNGTVAELKRAIEEVFVSPGGDEHCKITWSLVWGHFCLCYEGQNLI 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDK CIRVFGIKDGDQLQF+RHMSI+CLPVKRD K+Q+VSC+T+L L PESK VE+NQ A
Sbjct: 121 DDKACIRVFGIKDGDQLQFIRHMSISCLPVKRDRKSQTVSCRTVLFLPPESKCVEDNQLA 180

Query: 181 GQDDLENY-QVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSS 240
           G DD E Y +VH  GSNQEEV      GF LANFFRGR LYSRIWGF KSASEGRNRP S
Sbjct: 181 GPDDPETYEEVHEDGSNQEEVPI---PGFHLANFFRGRFLYSRIWGFLKSASEGRNRP-S 239

Query: 241 GFRIT 245
           GF IT
Sbjct: 241 GFGIT 239

[Close]

BLAST of Bhi01G002812 vs. ExPASy TrEMBL
Match: A0A6J1KGI2 (uncharacterized protein LOC111493024 OS=Cucurbita maxima OX=3661 GN=LOC111493024 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.1e-99
Identity = 185/244 (75.82%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60
           M  I    ER+KIGNLWRF+RF+D RCLA P TLD D D  AL RRPYRLLPR +LIDLF
Sbjct: 1   MRRIGGPRERSKIGNLWRFNRFIDNRCLA-PLTLDGDGDVDALRRRPYRLLPRLELIDLF 60

Query: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120
           VLKLDGSVFG+RV+RN TVADLK+AIEEVFDSP  SEHCKITWSL+WGHFCLCYEGEKLI
Sbjct: 61  VLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPRASEHCKITWSLVWGHFCLCYEGEKLI 120

Query: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180
           DDK  IRV GIKDGDQLQF+RHMSINCLP+KRD KNQ+V CKT+L L  ESKS+E NQ A
Sbjct: 121 DDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVA 180

Query: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240
           GQ D  NY+VH  GSNQEE+     AGFQLAN FRGR+LYS+IWGF +SASEGRNRPSSG
Sbjct: 181 GQGDPVNYEVHEDGSNQEEI---PMAGFQLANIFRGRLLYSKIWGFFRSASEGRNRPSSG 240

Query: 241 FRIT 245
           F IT
Sbjct: 241 FCIT 240

The following BLAST results are available for this feature:

BLAST of Bhi01G002812 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80060.1	5.4e-32	37.88	Ubiquitin-like superfamily protein	[more]
AT4G32270.1	1.6e-23	46.51	Ubiquitin-like superfamily protein	[more]
AT5G25340.1	1.1e-21	41.50	Ubiquitin-like superfamily protein	[more]
AT4G32270.2	2.8e-20	45.53	Ubiquitin-like superfamily protein	[more]
AT3G07860.1	6.9e-11	32.63	Ubiquitin-like superfamily protein	[more]

BLAST of Bhi01G002812 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ZBQ4	1.1e-10	37.93	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=...	[more]
Q8VIK1	1.1e-10	37.93	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 ...	[more]
Q9BV90	4.4e-10	36.78	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 G...	[more]
Q84WS8	9.7e-10	32.63	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana O...	[more]

BLAST of Bhi01G002812 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904269.1	5.7e-140	100.00	uncharacterized protein LOC120090621 isoform X1 [Benincasa hispida]	[more]
XP_008454172.1	1.8e-109	79.84	PREDICTED: uncharacterized protein LOC103494657 isoform X1 [Cucumis melo]	[more]
XP_004152330.1	3.0e-109	80.66	uncharacterized protein LOC101206096 [Cucumis sativus]	[more]
XP_022948349.1	1.2e-100	76.64	uncharacterized protein LOC111452053 [Cucurbita moschata] >KAG7036517.1 U11/U12 ...	[more]
XP_022153470.1	1.5e-100	77.55	uncharacterized protein LOC111020973 isoform X1 [Momordica charantia] >XP_022153...	[more]

BLAST of Bhi01G002812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BY00	8.6e-110	79.84	uncharacterized protein LOC103494657 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KTJ1	1.5e-109	80.66	Ubiquitin_4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006470...	[more]
A0A6J1G9M5	5.6e-101	76.64	uncharacterized protein LOC111452053 OS=Cucurbita moschata OX=3662 GN=LOC1114520...	[more]
A0A6J1DGY1	7.3e-101	77.55	uncharacterized protein LOC111020973 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1KGI2	1.1e-99	75.82	uncharacterized protein LOC111493024 OS=Cucurbita maxima OX=3661 GN=LOC111493024...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 53..151 e-value: 1.1E-31 score: 110.6
None	No IPR available	PANTHER	PTHR14942:SF9	OS02G0188500 PROTEIN	coord: 41..239
IPR040610	SNRNP25, ubiquitin-like domain	PFAM	PF18036	Ubiquitin_4	coord: 58..142 e-value: 9.2E-24 score: 83.3
IPR040610	SNRNP25, ubiquitin-like domain	CDD	cd17058	Ubl_SNRNP25	coord: 57..142 e-value: 1.75021E-33 score: 114.538
IPR039690	U11/U12 small nuclear ribonucleoprotein 25kDa protein	PANTHER	PTHR14942	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN	coord: 41..239
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 54..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M002812	Bhi01M002812	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005689	U12-type spliceosomal complex