Bhi01G002481 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G002481
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Integrase
Location	chr1: 79758465 .. 79759280 (-)
RNA-Seq Expression	Bhi01G002481
Synteny	Bhi01G002481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGCAAAAGATTTGTTGATAAAGTTCAAAATGGAGAATGCTTGTCCTGCTAGTACTCCTATGGAACTGGGTTTAAAGTTAAGCAAGCATGATGATAGTGAAGCTTTTGATCCCACCATCTATAGAAGTCTTGTTGGAAGTTTAATGTATTTAACTACAACTAGACCTGATCTCATGTTTTCAGTAAGTTTGTTGAGTATATTTATGGCATCACCAAAGAGAAGTCATTGGGAAGTTGGAAAGAGAGTTCTTAGATATATTCTTGGAACTGTTGATCATGGAATCCACTATAAAAGGAATGTGGATAACGTTCTTATTGGCTACAATGATAGTGATTGGGGAGGAAATATTAATGATTTCAAAAGTACTTCTGGGTATGTATTTAATATTGGTTCTGAAGCAGTTTCGTGGGCATCAAAGAAGCAAGATGTTGTAGCATTATCAACGACAGAAGCTGAATACATGTCTTGTCTGCAGCTAGTTGTCAAGCACTTTGGCTTAGAAAGGTACTACATGAATTGAAGTGTCCTTAAGAGAAAGGGACTGTCATGTTCTAAGTGTCCTCAAGAGAAAGGGACTGTCATGTTCTGTGACAATAAATCATCTATTTCACTTTCGAAGAATCTAGTTTTACATGGAAAAAGCAAACACATACAGATCAAGTATCATTTCATCAGAGAATTAATCAAAGATGGAGAAGTATATATCAAGTATTGCAAGACACAAGATCAAGTTGCAGACATATTCACAAAAGCATTAAAGACAAACTTATTCTTGAAAATGAAAGAGAAGCTCGGAGTTAGGGAAGTCTAG

mRNA sequence

ATGTATGCAAAAGATTTGTTGATAAAGTTCAAAATGGAGAATGCTTGTCCTGCTAGTACTCCTATGGAACTGGGTTTAAAGTTAAGCAAGCATGATGATAGTGAAGCTTTTGATCCCACCATCTATAGAAGTCTTGTTGGAAGTTTAATGTATTTAACTACAACTAGACCTGATCTCATGTTTTCAGTAAGTTTGTTGAGTATATTTATGGCATCACCAAAGAGAAGTCATTGGGAAGTTGGAAAGAGAGTTCTTAGATATATTCTTGGAACTGTTGATCATGGAATCCACTATAAAAGGAATGTGGATAACGTTCTTATTGGCTACAATGATAGTGATTGGGGAGGAAATATTAATGATTTCAAAAGTACTTCTGGGTATGTATTTAATATTGGTTCTGAAGCAGTTTCGTGGGCATCAAAGAAGCAAGATGTTGTAGCATTATCAACGACAGAAGCTGAATACATGTCTTGTCTGCAGCTAGTTAGAAAGGGACTGTCATGTTCTAAGTGTCCTCAAGAGAAAGGGACTGTCATGTTCTGTGACAATAAATCATCTATTTCACTTTCGAAGAATCTAGTTTTACATGGAAAAAGCAAACACATACAGATCAAGTATCATTTCATCAGAGAATTAATCAAAGATGGAGAAGTATATATCAAGTATTGCAAGACACAAGATCAAGTTGCAGACATATTCACAAAAGCATTAAAGACAAACTTATTCTTGAAAATGAAAGAGAAGCTCGGAGTTAGGGAAGTCTAG

Coding sequence (CDS)

ATGTATGCAAAAGATTTGTTGATAAAGTTCAAAATGGAGAATGCTTGTCCTGCTAGTACTCCTATGGAACTGGGTTTAAAGTTAAGCAAGCATGATGATAGTGAAGCTTTTGATCCCACCATCTATAGAAGTCTTGTTGGAAGTTTAATGTATTTAACTACAACTAGACCTGATCTCATGTTTTCAGTAAGTTTGTTGAGTATATTTATGGCATCACCAAAGAGAAGTCATTGGGAAGTTGGAAAGAGAGTTCTTAGATATATTCTTGGAACTGTTGATCATGGAATCCACTATAAAAGGAATGTGGATAACGTTCTTATTGGCTACAATGATAGTGATTGGGGAGGAAATATTAATGATTTCAAAAGTACTTCTGGGTATGTATTTAATATTGGTTCTGAAGCAGTTTCGTGGGCATCAAAGAAGCAAGATGTTGTAGCATTATCAACGACAGAAGCTGAATACATGTCTTGTCTGCAGCTAGTTAGAAAGGGACTGTCATGTTCTAAGTGTCCTCAAGAGAAAGGGACTGTCATGTTCTGTGACAATAAATCATCTATTTCACTTTCGAAGAATCTAGTTTTACATGGAAAAAGCAAACACATACAGATCAAGTATCATTTCATCAGAGAATTAATCAAAGATGGAGAAGTATATATCAAGTATTGCAAGACACAAGATCAAGTTGCAGACATATTCACAAAAGCATTAAAGACAAACTTATTCTTGAAAATGAAAGAGAAGCTCGGAGTTAGGGAAGTCTAG

Protein sequence

MYAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMFSVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDFKSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMSCLQLVRKGLSCSKCPQEKGTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTKALKTNLFLKMKEKLGVREV

Homology

[Close]

BLAST of Bhi01G002481 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 135.2 bits (339), Expect = 7.4e-32
Identity = 75/216 (34.72%), Postives = 120/216 (55.56%), Query Frame = 0


Query: 2   YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
           YA DLL +  +    P+S PM+  +  S H   +  D   YR L+G LMYL  TR D+ F
Sbjct: 338 YALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISF 397

Query: 62  SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
           +V+ LS F  +P+ +H +   ++L YI GTV  G+ Y    +  L  ++D+ +    +  
Sbjct: 398 AVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTR 457

Query: 122 KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMSC------LQLVRKGLSCSKCPQEK 181
           +ST+GY   +G+  +SW SKKQ VV+ S+ EAEY +       +  + +     + P  K
Sbjct: 458 RSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSK 517

Query: 182 GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRE 212
            T++FCDN ++I ++ N V H ++KHI+   H +RE
Sbjct: 518 PTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Bhi01G002481 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 2.5e-24
Identity = 63/180 (35.00%), Postives = 105/180 (58.33%), Query Frame = 0


Query: 2   YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
           YA+ +L    M +  P STP+ L L  S    ++  DP+ +RS+VG+L YLT TRPD+ +
Sbjct: 61  YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 120

Query: 62  SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
           +V+++   M  P  + +++ KRVLRY+ GT+ HG++  +N    +  + DSDW G  +  
Sbjct: 121 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 180

Query: 122 KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEY----MSCLQLVRKGLSCSKCPQEKGT 178
           +ST+G+   +G   +SW++K+Q  V+ S+TE EY    ++  +L     S S+ P    T
Sbjct: 181 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSSASRSRDPSAMNT 239

[Close]

BLAST of Bhi01G002481 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 58.5 bits (140), Expect = 8.8e-09
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 50  MYLTTTRPDLMFSVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGY 109
           MYLT TRPDL F+V+ LS F ++ + +  +   +VL Y+ GTV  G+ Y    D  L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 110 NDSDWGGNINDFKSTSGY 128
            DSDW    +  +S +G+
Sbjct: 61  ADSDWASCPDTRRSVTGF 78

[Close]

BLAST of Bhi01G002481 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-49
Identity = 110/264 (41.67%), Postives = 147/264 (55.68%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            Y  DLL +  M  A P +TPM    KL+ H  ++  DPT YR +VGSL YL  TRPDL +
Sbjct: 1188 YTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSY 1247

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +V+ LS +M  P   HW   KRVLRY+ GT DHGI  K+     L  Y+D+DW G+ +D+
Sbjct: 1248 AVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDY 1307

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----------CLQLVRKGLSCSK 181
             ST+GY+  +G   +SW+SKKQ  V  S+TEAEY S           C  L   G+  S 
Sbjct: 1308 VSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSH 1367

Query: 182  CPQEKGTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVA 241
             P     V++CDN  +  L  N V H + KHI + YHFIR  ++ G + + +  T DQ+A
Sbjct: 1368 PP-----VIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLA 1427

Query: 242  DIFTKALKTNLFLKMKEKLGVREV 255
            D  TK L    F     K+GV +V
Sbjct: 1428 DTLTKPLSRVAFQNFSRKIGVIKV 1446

[Close]

BLAST of Bhi01G002481 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.2e-48
Identity = 107/264 (40.53%), Postives = 147/264 (55.68%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            Y  DLL +  M  A P +TPM    KLS +  ++  DPT YR +VGSL YL  TRPD+ +
Sbjct: 1205 YILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISY 1264

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +V+ LS FM  P   H +  KR+LRY+ GT +HGI  K+     L  Y+D+DW G+ +D+
Sbjct: 1265 AVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDY 1324

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----------CLQLVRKGLSCSK 181
             ST+GY+  +G   +SW+SKKQ  V  S+TEAEY S           C  L   G+  ++
Sbjct: 1325 VSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTR 1384

Query: 182  CPQEKGTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVA 241
             P     V++CDN  +  L  N V H + KHI I YHFIR  ++ G + + +  T DQ+A
Sbjct: 1385 PP-----VIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLA 1444

Query: 242  DIFTKALKTNLFLKMKEKLGVREV 255
            D  TK L    F     K+GV  V
Sbjct: 1445 DTLTKPLSRTAFQNFASKIGVTRV 1463

[Close]

BLAST of Bhi01G002481 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.1e-43
Identity = 101/262 (38.55%), Postives = 157/262 (59.92%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKH------DDSEAFDPTIYRSLVGSLMY-LTT 61
            Y + +L +F M+NA P STP+   LKLSK       ++        Y S VGSLMY +  
Sbjct: 1065 YIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVC 1124

Query: 62   TRPDLMFSVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDW 121
            TRPD+  +V ++S F+ +P + HWE  K +LRY+ GT    + +  + D +L GY D+D 
Sbjct: 1125 TRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGS-DPILKGYTDADM 1184

Query: 122  GGNINDFKSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMSCLQLVRKGLSCSKCPQE 181
             G+I++ KS++GY+F     A+SW SK Q  VALSTTEAEY++  +  ++ +   +  QE
Sbjct: 1185 AGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQE 1244

Query: 182  KGT-----VMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQV 241
             G      V++CD++S+I LSKN + H ++KHI ++YH+IRE++ D  + +    T +  
Sbjct: 1245 LGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENP 1304

Query: 242  ADIFTKALKTNLFLKMKEKLGV 252
            AD+ TK +  N F   KE +G+
Sbjct: 1305 ADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Bhi01G002481 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-42
Identity = 102/260 (39.23%), Postives = 158/260 (60.77%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMY-LTTTRPDLM 61
            Y K +L KF MEN    STP+   +     +  E  + T  RSL+G LMY +  TRPDL 
Sbjct: 1142 YVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN-TPCRSLIGCLMYIMLCTRPDLT 1201

Query: 62   FSVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNV--DNVLIGYNDSDWGGNI 121
             +V++LS + +      W+  KRVLRY+ GT+D  + +K+N+  +N +IGY DSDW G+ 
Sbjct: 1202 TAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSE 1261

Query: 122  NDFKSTSGYVFNI-GSEAVSWASKKQDVVALSTTEAEYMSCLQLVRKG------LSCSKC 181
             D KST+GY+F +     + W +K+Q+ VA S+TEAEYM+  + VR+       L+    
Sbjct: 1262 IDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI 1321

Query: 182  PQEKGTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVAD 241
              E    ++ DN+  IS++ N   H ++KHI IKYHF RE +++  + ++Y  T++Q+AD
Sbjct: 1322 KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLAD 1381

Query: 242  IFTKALKTNLFLKMKEKLGV 252
            IFTK L    F+++++KLG+
Sbjct: 1382 IFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Bhi01G002481 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.2e-24
Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 0


Query: 42  YRSLVGSLMYL-TTTRPDLMFSVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKR 101
           Y S VG++MYL   TRPDL  +V +LS F + P  +HW+  KRVLRY+  T  +G+ + R
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 102 NVDNVLIGYNDSDWGGNINDFKSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMSCLQ 161
                L+GY+D+DW G++   +STSGY+F +    VSW SKKQ  VALS+TE EYM+  +
Sbjct: 66  AGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSE 125

Query: 162 LVRKGL 167
             ++ +
Sbjct: 126 ATQEAV 131

[Close]

BLAST of Bhi01G002481 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.8e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 1090 YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 1149

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 1150 AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 1209

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
            KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 1210 KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 1269

Query: 182  GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
             TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 1270 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 1329

Query: 242  ALKTNLFLKMKEKLGVREV 255
            ALK +LF+K + KLGV +V
Sbjct: 1330 ALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Bhi01G002481 vs. NCBI nr
Match: KAA0060377.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.8e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 1090 YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 1149

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 1150 AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 1209

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
            KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 1210 KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 1269

Query: 182  GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
             TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 1270 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 1329

Query: 242  ALKTNLFLKMKEKLGVREV 255
            ALK +LF+K + KLGV +V
Sbjct: 1330 ALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Bhi01G002481 vs. NCBI nr
Match: KAA0038926.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.8e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 1090 YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 1149

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 1150 AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 1209

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
            KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 1210 KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 1269

Query: 182  GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
             TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 1270 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 1329

Query: 242  ALKTNLFLKMKEKLGVREV 255
            ALK +LF+K + KLGV +V
Sbjct: 1330 ALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Bhi01G002481 vs. NCBI nr
Match: KAA0048003.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.8e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 875  YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 934

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 935  AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 994

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
            KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 995  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 1054

Query: 182  GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
             TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 1055 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 1114

Query: 242  ALKTNLFLKMKEKLGVREV 255
            ALK +LF+K + KLGV +V
Sbjct: 1115 ALKFDLFVKFRGKLGVAQV 1133

[Close]

BLAST of Bhi01G002481 vs. NCBI nr
Match: KAA0057291.1 (integrase [Cucumis melo var. makuwa] >KAA0060890.1 integrase [Cucumis melo var. makuwa] >KAA0062702.1 integrase [Cucumis melo var. makuwa] >TYJ98712.1 integrase [Cucumis melo var. makuwa] >TYK13441.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.8e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 1090 YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 1149

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 1150 AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 1209

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
            KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 1210 KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 1269

Query: 182  GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
             TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 1270 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 1329

Query: 242  ALKTNLFLKMKEKLGVREV 255
            ALK +LF+K + KLGV +V
Sbjct: 1330 ALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Bhi01G002481 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 1090 YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 1149

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 1150 AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 1209

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
            KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 1210 KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 1269

Query: 182  GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
             TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 1270 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 1329

Query: 242  ALKTNLFLKMKEKLGVREV 255
            ALK +LF+K + KLGV +V
Sbjct: 1330 ALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Bhi01G002481 vs. ExPASy TrEMBL
Match: A0A5D3E3T2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 1090 YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 1149

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 1150 AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 1209

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
            KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 1210 KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 1269

Query: 182  GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
             TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 1270 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 1329

Query: 242  ALKTNLFLKMKEKLGVREV 255
            ALK +LF+K + KLGV +V
Sbjct: 1330 ALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Bhi01G002481 vs. ExPASy TrEMBL
Match: A0A5D3D538 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00090 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2   YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
           YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 35  YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 94

Query: 62  SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
           +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 95  AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 154

Query: 122 KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
           KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 155 KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 214

Query: 182 GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
            TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 215 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 274

Query: 242 ALKTNLFLKMKEKLGVREV 255
           ALK +LF+K + KLGV +V
Sbjct: 275 ALKFDLFVKFRGKLGVAQV 293

[Close]

BLAST of Bhi01G002481 vs. ExPASy TrEMBL
Match: A0A5A7UDP7 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001450 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 1090 YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 1149

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 1150 AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 1209

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
            KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 1210 KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 1269

Query: 182  GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
             TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 1270 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 1329

Query: 242  ALKTNLFLKMKEKLGVREV 255
            ALK +LF+K + KLGV +V
Sbjct: 1330 ALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Bhi01G002481 vs. ExPASy TrEMBL
Match: A0A5A7TWN2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00690 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 2    YAKDLLIKFKMENACPASTPMELGLKLSKHDDSEAFDPTIYRSLVGSLMYLTTTRPDLMF 61
            YA DLL KF+MENA P +TPM+  LKL K D  EA DP++YRSLVGSLMYLT TRPD++F
Sbjct: 875  YAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF 934

Query: 62   SVSLLSIFMASPKRSHWEVGKRVLRYILGTVDHGIHYKRNVDNVLIGYNDSDWGGNINDF 121
            +VS+LS FM +PKRSHWE GKRVLRYILGT++ GI+YK+  ++V+ G+ DSDWGGN++D 
Sbjct: 935  AVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH 994

Query: 122  KSTSGYVFNIGSEAVSWASKKQDVVALSTTEAEYMS-----CLQL-VRKGLSCSKCPQEK 181
            KSTSGYVF++GS   SW SKKQ VVALSTTEAEY+S     C  L +R  L   KC Q+ 
Sbjct: 995  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKC 1054

Query: 182  GTVMFCDNKSSISLSKNLVLHGKSKHIQIKYHFIRELIKDGEVYIKYCKTQDQVADIFTK 241
             TV+FCDN S+I+LSKN V HG+SKHI+IKYHFIR+L+KDGEV +KYCKTQDQVADIFTK
Sbjct: 1055 ETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK 1114

Query: 242  ALKTNLFLKMKEKLGVREV 255
            ALK +LF+K + KLGV +V
Sbjct: 1115 ALKFDLFVKFRGKLGVAQV 1133

The following BLAST results are available for this feature:

BLAST of Bhi01G002481 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	7.4e-32	34.72	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.5e-24	35.00	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	8.8e-09	38.46	Gag-Pol-related retrotransposon family protein	[more]

BLAST of Bhi01G002481 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	1.0e-49	41.67	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	7.2e-48	40.53	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	3.1e-43	38.55	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.2e-42	39.23	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	3.2e-24	45.24	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Bhi01G002481 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ95504.1	2.8e-89	66.41	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0060377.1	2.8e-89	66.41	integrase [Cucumis melo var. makuwa]	[more]
KAA0038926.1	2.8e-89	66.41	integrase [Cucumis melo var. makuwa]	[more]
KAA0048003.1	2.8e-89	66.41	integrase [Cucumis melo var. makuwa]	[more]
KAA0057291.1	2.8e-89	66.41	integrase [Cucumis melo var. makuwa] >KAA0060890.1 integrase [Cucumis melo var. ...	[more]

BLAST of Bhi01G002481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLV1	1.3e-89	66.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3E3T2	1.3e-89	66.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4...	[more]
A0A5D3D538	1.3e-89	66.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00090 PE=...	[more]
A0A5A7UDP7	1.3e-89	66.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001450 PE=...	[more]
A0A5A7TWN2	1.3e-89	66.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00690 PE=4...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 117..253
None	No IPR available	PANTHER	PTHR11439:SF355	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 117..253
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 107..237 e-value: 1.03732E-63 score: 193.839

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M002481	Bhi01M002481	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding