Bhi01G002434 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G002434
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr1: 78233062 .. 78233406 (-)
RNA-Seq Expression	Bhi01G002434
Synteny	Bhi01G002434

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACGTCTCCCTCTTTCCCAACTCACCCTCAGTCAATGTCGTGCAAAACAATCCCAACACTTTACCAAATACCTATCGAAATCCCTATGGAAACAACCAGCCCTCAAACTATAGAGGCAGAGGAGGTCGAAACAGGGAACGTGGCCGATGGAACAGTGCTTCGACAACCAGGCCTACTTGCCAAACTTATGGGAAAATTGGTCATACTACCGACATCTTCTACTTTAAGTATAATAAGAGTTCAACAACCCTCGACAGACACACACTCGAGCTAAATCTACTCAGTTCCCATCAAGCAGAAATCAAGAACAGAACACTTCTGCCTTACTTGCTCACTTGA

mRNA sequence

ATGGCAAACGTCTCCCTCTTTCCCAACTCACCCTCAGTCAATGTCGTGCAAAACAATCCCAACACTTTACCAAATACCTATCGAAATCCCTATGGAAACAACCAGCCCTCAAACTATAGAGGCAGAGGAGGTCGAAACAGGGAACGTGGCCGATGGAACAGTGCTTCGACAACCAGGCCTACTTGCCAAACTTATGGGAAAATTGGTCATACTACCGACATCTTCTACTTTAAGTATAATAAGAGTTCAACAACCCTCGACAGACACACACTCGAGCTAAATCTACTCAGTTCCCATCAAGCAGAAATCAAGAACAGAACACTTCTGCCTTACTTGCTCACTTGA

Coding sequence (CDS)

ATGGCAAACGTCTCCCTCTTTCCCAACTCACCCTCAGTCAATGTCGTGCAAAACAATCCCAACACTTTACCAAATACCTATCGAAATCCCTATGGAAACAACCAGCCCTCAAACTATAGAGGCAGAGGAGGTCGAAACAGGGAACGTGGCCGATGGAACAGTGCTTCGACAACCAGGCCTACTTGCCAAACTTATGGGAAAATTGGTCATACTACCGACATCTTCTACTTTAAGTATAATAAGAGTTCAACAACCCTCGACAGACACACACTCGAGCTAAATCTACTCAGTTCCCATCAAGCAGAAATCAAGAACAGAACACTTCTGCCTTACTTGCTCACTTGA

Protein sequence

MANVSLFPNSPSVNVVQNNPNTLPNTYRNPYGNNQPSNYRGRGGRNRERGRWNSASTTRPTCQTYGKIGHTTDIFYFKYNKSSTTLDRHTLELNLLSSHQAEIKNRTLLPYLLT

Homology

[Close]

BLAST of Bhi01G002434 vs. NCBI nr
Match: XP_038875081.1 (uncharacterized protein LOC120067610 [Benincasa hispida])

HSP 1 Score: 60.8 bits (146), Expect = 8.5e-06
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 1   MANVSLFPNSPSVNVVQNNPNTLPNTYRNPYGNNQPSNYRG 42
           M NVS+  NSPSVNVVQN+P+TL N YRN YGNNQ SNYRG
Sbjct: 122 MTNVSISSNSPSVNVVQNSPSTLSNPYRNSYGNNQSSNYRG 162

[Close]

BLAST of Bhi01G002434 vs. NCBI nr
Match: TXG67243.1 (hypothetical protein EZV62_008518 [Acer yangbiense])

HSP 1 Score: 54.3 bits (129), Expect = 8.0e-04
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 9   NSPSVNVVQNNPNTLPNTYR-------NPYGNNQPSNYRGRGGRNRERGRWNSASTTRPT 68
           +SPS ++  N PN  PNT +       N  GN  P+    RGG  R RGR    + +RPT
Sbjct: 261 SSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRNNNSRPT 320

Query: 69  CQTYGKIGHTTDIFYFKYN 81
           CQ  GK GH+  + YF+Y+
Sbjct: 321 CQVCGKFGHSASVCYFRYD 339

[Close]

BLAST of Bhi01G002434 vs. NCBI nr
Match: TXG55646.1 (hypothetical protein EZV62_020902 [Acer yangbiense])

HSP 1 Score: 54.3 bits (129), Expect = 8.0e-04
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 9   NSPSVNVVQNNPNTLPNTYR-------NPYGNNQPSNYRGRGGRNRERGRWNSASTTRPT 68
           +SPS ++  N PN  PNT +       N  GN  P+    RGG  R RGR    + +RPT
Sbjct: 253 SSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRNNNSRPT 312

Query: 69  CQTYGKIGHTTDIFYFKYN 81
           CQ  GK GH+  + YF+Y+
Sbjct: 313 CQVCGKFGHSASVCYFRYD 331

[Close]

BLAST of Bhi01G002434 vs. NCBI nr
Match: TXG69253.1 (hypothetical protein EZV62_004188 [Acer yangbiense])

HSP 1 Score: 54.3 bits (129), Expect = 8.0e-04
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 9   NSPSVNVVQNNPNTLPNTYR-------NPYGNNQPSNYRGRGGRNRERGRWNSASTTRPT 68
           +SPS ++  N PN  PNT +       N  GN  P+    RGG  R RGR    + +RPT
Sbjct: 261 SSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRNNNSRPT 320

Query: 69  CQTYGKIGHTTDIFYFKYN 81
           CQ  GK GH+  + YF+Y+
Sbjct: 321 CQVCGKFGHSASVCYFRYD 339

[Close]

BLAST of Bhi01G002434 vs. ExPASy TrEMBL
Match: A0A5C7ID32 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008518 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-04
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 9   NSPSVNVVQNNPNTLPNTYR-------NPYGNNQPSNYRGRGGRNRERGRWNSASTTRPT 68
           +SPS ++  N PN  PNT +       N  GN  P+    RGG  R RGR    + +RPT
Sbjct: 261 SSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRNNNSRPT 320

Query: 69  CQTYGKIGHTTDIFYFKYN 81
           CQ  GK GH+  + YF+Y+
Sbjct: 321 CQVCGKFGHSASVCYFRYD 339

[Close]

BLAST of Bhi01G002434 vs. ExPASy TrEMBL
Match: A0A5C7IJ06 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004188 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-04
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 9   NSPSVNVVQNNPNTLPNTYR-------NPYGNNQPSNYRGRGGRNRERGRWNSASTTRPT 68
           +SPS ++  N PN  PNT +       N  GN  P+    RGG  R RGR    + +RPT
Sbjct: 261 SSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRNNNSRPT 320

Query: 69  CQTYGKIGHTTDIFYFKYN 81
           CQ  GK GH+  + YF+Y+
Sbjct: 321 CQVCGKFGHSASVCYFRYD 339

[Close]

BLAST of Bhi01G002434 vs. ExPASy TrEMBL
Match: A0A5C7HHE9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020902 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-04
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 9   NSPSVNVVQNNPNTLPNTYR-------NPYGNNQPSNYRGRGGRNRERGRWNSASTTRPT 68
           +SPS ++  N PN  PNT +       N  GN  P+    RGG  R RGR    + +RPT
Sbjct: 253 SSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRNNNSRPT 312

Query: 69  CQTYGKIGHTTDIFYFKYN 81
           CQ  GK GH+  + YF+Y+
Sbjct: 313 CQVCGKFGHSASVCYFRYD 331

The following BLAST results are available for this feature:

BLAST of Bhi01G002434 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01G002434 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01G002434 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875081.1	8.5e-06	75.61	uncharacterized protein LOC120067610 [Benincasa hispida]	[more]
TXG67243.1	8.0e-04	40.51	hypothetical protein EZV62_008518 [Acer yangbiense]	[more]
TXG55646.1	8.0e-04	40.51	hypothetical protein EZV62_020902 [Acer yangbiense]	[more]
TXG69253.1	8.0e-04	40.51	hypothetical protein EZV62_004188 [Acer yangbiense]	[more]

BLAST of Bhi01G002434 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7ID32	3.9e-04	40.51	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008518 PE=4 SV=1	[more]
A0A5C7IJ06	3.9e-04	40.51	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004188 PE=4 SV=1	[more]
A0A5C7HHE9	3.9e-04	40.51	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020902 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M002434	Bhi01M002434	mRNA