Bhi01G002425 (gene) Wax gourd (B227) v1

Overview
NameBhi01G002425
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Locationchr1: 77549030 .. 77549262 (+)
RNA-Seq ExpressionBhi01G002425
SyntenyBhi01G002425
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACTGGCCATAGACAAGCATCATTTTCTATTATTGAGGAGTGCATGAAGAAGAAGATTAGCATTGATGATAGTCATCCGATCACACTTAAAGTTATAGTGAATTATATTCGGATTGAGCATGGATTGGACATAAGTTTCCAAAAAGCTTGGTGTGCTCGAGAAGCTGCTGTGAATGAAATTCGAGGACCACCTGAAGAATCTGTTAAGATAATTCCAGCATTTGCATGTTAG

mRNA sequence

TGACTGGCCATAGACAAGCATCATTTTCTATTATTGAGGAGTGCATGAAGAAGAAGATTAGCATTGATGATAGTCATCCGATCACACTTAAAGTTATAGTGAATTATATTCGGATTGAGCATGGATTGGACATAAGTTTCCAAAAAGCTTGGTGTGCTCGAGAAGCTGCTGTGAATGAAATTCGAGGACCACCTGAAGAATCTGTTAAGATAATTCCAGCATTTGCATGTTAG

Coding sequence (CDS)

TGACTGGCCATAGACAAGCATCATTTTCTATTATTGAGGAGTGCATGAAGAAGAAGATTAGCATTGATGATAGTCATCCGATCACACTTAAAGTTATAGTGAATTATATTCGGATTGAGCATGGATTGGACATAAGTTTCCAAAAAGCTTGGTGTGCTCGAGAAGCTGCTGTGAATGAAATTCGAGGACCACCTGAAGAATCTGTTAAGATAATTCCAGCATTTGCATGTTAG

Protein sequence

TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEIRGPPEESVKIIPAFAC
Homology
BLAST of Bhi01G002425 vs. NCBI nr
Match: XP_016902990.1 (PREDICTED: uncharacterized protein LOC107991989 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-16
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HRQA F++I++  K KIS+  S   TLKVIV++IR EHGL IS+QKAW A EAA+++I
Sbjct: 81  TDHRQAIFTVIKDLNKNKISLAGSELSTLKVIVHFIRAEHGLSISYQKAWYACEAALDDI 140

Query: 61  RGPPEESVKIIPAFA 76
           RG PEES KI+P FA
Sbjct: 141 RGSPEESYKILPRFA 155

BLAST of Bhi01G002425 vs. NCBI nr
Match: KAA0057223.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYK18739.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-12
Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HRQA+F++I++ +K KIS+  S   T K IV++IR+EHGL I +QKAW AREAA+++I
Sbjct: 37  TDHRQATFTVIKDLIKNKISLAGSELSTPKDIVHFIRVEHGLSICYQKAWRAREAALDDI 96

Query: 61  RGPPEESVKIIPAFA 76
            G  E+S  ++P FA
Sbjct: 97  CGSLEDSYNMLPRFA 111

BLAST of Bhi01G002425 vs. NCBI nr
Match: KAA0033232.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYJ98812.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-12
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HR A+F++I++ +K KI +  S   T K IV YIR EHGL I +Q AW AREAA++EI
Sbjct: 91  TDHRHATFTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEI 150

Query: 61  RGPPEESVKIIPAF 75
            G PE+S K+IP F
Sbjct: 151 HGSPEDSYKMIPQF 164

BLAST of Bhi01G002425 vs. NCBI nr
Match: KAA0058851.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYK23770.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-12
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HR A+F++I++ +K KIS+  S   T K IV++IR EH L IS+QKAW ARE A+++ 
Sbjct: 45  TDHRLATFTVIKDLIKNKISLTGSELSTPKDIVHFIRAEHDLSISYQKAWRAREVALDDN 104

Query: 61  RGPPEESVKIIPAFA 76
            G PEES K++P FA
Sbjct: 105 HGSPEESYKMLPRFA 119

BLAST of Bhi01G002425 vs. NCBI nr
Match: XP_008441658.1 (PREDICTED: uncharacterized protein LOC103485740 [Cucumis melo])

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-12
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HR A+F++I++ +K KIS+  S   T K IV++IR EH L IS+QKAW ARE A+++ 
Sbjct: 52  TDHRLATFTVIKDLIKNKISLTGSELSTPKDIVHFIRAEHDLSISYQKAWRAREVALDDN 111

Query: 61  RGPPEESVKIIPAFA 76
            G PEES K++P FA
Sbjct: 112 HGSPEESYKMLPRFA 126

BLAST of Bhi01G002425 vs. ExPASy TrEMBL
Match: A0A1S4E4T7 (uncharacterized protein LOC107991989 OS=Cucumis melo OX=3656 GN=LOC107991989 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HRQA F++I++  K KIS+  S   TLKVIV++IR EHGL IS+QKAW A EAA+++I
Sbjct: 81  TDHRQAIFTVIKDLNKNKISLAGSELSTLKVIVHFIRAEHGLSISYQKAWYACEAALDDI 140

Query: 61  RGPPEESVKIIPAFA 76
           RG PEES KI+P FA
Sbjct: 141 RGSPEESYKILPRFA 155

BLAST of Bhi01G002425 vs. ExPASy TrEMBL
Match: A0A5D3D5B0 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00410 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.2e-13
Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HRQA+F++I++ +K KIS+  S   T K IV++IR+EHGL I +QKAW AREAA+++I
Sbjct: 37  TDHRQATFTVIKDLIKNKISLAGSELSTPKDIVHFIRVEHGLSICYQKAWRAREAALDDI 96

Query: 61  RGPPEESVKIIPAFA 76
            G  E+S  ++P FA
Sbjct: 97  CGSLEDSYNMLPRFA 111

BLAST of Bhi01G002425 vs. ExPASy TrEMBL
Match: A0A5D3DK39 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00920 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.9e-13
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HR A+F++I++ +K KIS+  S   T K IV++IR EH L IS+QKAW ARE A+++ 
Sbjct: 45  TDHRLATFTVIKDLIKNKISLTGSELSTPKDIVHFIRAEHDLSISYQKAWRAREVALDDN 104

Query: 61  RGPPEESVKIIPAFA 76
            G PEES K++P FA
Sbjct: 105 HGSPEESYKMLPRFA 119

BLAST of Bhi01G002425 vs. ExPASy TrEMBL
Match: A0A5D3BGB6 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold703G00120 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.9e-13
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HR A+F++I++ +K KI +  S   T K IV YIR EHGL I +Q AW AREAA++EI
Sbjct: 91  TDHRHATFTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEI 150

Query: 61  RGPPEESVKIIPAF 75
            G PE+S K+IP F
Sbjct: 151 HGSPEDSYKMIPQF 164

BLAST of Bhi01G002425 vs. ExPASy TrEMBL
Match: A0A1S3B4K4 (uncharacterized protein LOC103485740 OS=Cucumis melo OX=3656 GN=LOC103485740 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.9e-13
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 0

Query: 1   TGHRQASFSIIEECMKKKISIDDSHPITLKVIVNYIRIEHGLDISFQKAWCAREAAVNEI 60
           T HR A+F++I++ +K KIS+  S   T K IV++IR EH L IS+QKAW ARE A+++ 
Sbjct: 52  TDHRLATFTVIKDLIKNKISLTGSELSTPKDIVHFIRAEHDLSISYQKAWRAREVALDDN 111

Query: 61  RGPPEESVKIIPAFA 76
            G PEES K++P FA
Sbjct: 112 HGSPEESYKMLPRFA 126

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_016902990.12.7e-1661.33PREDICTED: uncharacterized protein LOC107991989 [Cucumis melo][more]
KAA0057223.11.1e-1252.00protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYK18739.... [more]
KAA0033232.11.8e-1254.05protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYJ98812.... [more]
KAA0058851.11.8e-1252.00protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYK23770.... [more]
XP_008441658.11.8e-1252.00PREDICTED: uncharacterized protein LOC103485740 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A1S4E4T71.3e-1661.33uncharacterized protein LOC107991989 OS=Cucumis melo OX=3656 GN=LOC107991989 PE=... [more]
A0A5D3D5B05.2e-1352.00Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5D3DK398.9e-1352.00Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5D3BGB68.9e-1354.05Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3B4K48.9e-1352.00uncharacterized protein LOC103485740 OS=Cucumis melo OX=3656 GN=LOC103485740 PE=... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M002425Bhi01M002425mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding