Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATATTGAAAGGTTATGTACGAAACAAAGCACAGTCAGAAGGGTGTATTGCAGCATGTTACTTAACTGATGAATGTGTTAACTTTTCAAACAAGTATTTTAAACAGTCAGTTAAGGTAGTGAATAAACAACAACGTAATGAAGATTACCAAAATGATGTCATAGTAGAGGGTCTCCCTATATCTTCTGGAACTCCAATTGTATTATTTGATTATGTACTTGAGAATGTACATCGATATGTTCTATTCAATACAGCAGAGGTGGAACCATTTACTGAATGAGTTATTTTAACAATATTACTTAGTTTAATTTAAGACTATTATTTAATGACATCTTATTGGGTAGGATGCATATGAATAAACTCATGATCTTAGATAAAAGACTAGCAAAAGATTCTAATCTACTTTGGAAGATTCATACAGAACAATTTCCATCATGGTTGAAATCCAAGGTAATACTAACTATTTAATAACGAATGGAAATTTAAAACCATAATATACTTTCACTAACAAGTAGGTATGTTTATTCTTATCAGATTAAATTAGATTCATCTGTTGAAGGTTACTCTGACTTGTTAAAATGGCTTGCAAATGGGCCCAGAAAAAATGCTATGTCTTACACTGGATACATCATAAATGGGCAACGGTTTCACATAAAGAGTGCTAAAAAATCAACCAAAAATAGTGGTGTTGTTGTACATGCTAGAACATTATGTAGATCCAGTGCAAAAGATCAATCTCAAGTTGTGAACCTAGTTCCTTATAGAAACCATCTTATTAGATTATTGTGTTTACTAACTTCCAATCTTTCGATGCGACTAGGTAAATATTCGTAA
mRNA sequence
ATGAAGATATTGAAAGGTTATGTACGAAACAAAGCACAGTCAGAAGGGTGTATTGCAGCATGTTACTTAACTGATGAATGTGTTAACTTTTCAAACAAGTATTTTAAACAGTCAGTTAAGGTAGTGAATAAACAACAACGTAATGAAGATTACCAAAATGATGTCATAGTAGAGGGTCTCCCTATATCTTCTGGAACTCCAATTGTATTATTTGATTATGTACTTGAGAATGTACATCGATATGTTCTATTCAATACAGCAGAGATTAAATTAGATTCATCTGTTGAAGGTTACTCTGACTTGTTAAAATGGCTTGCAAATGGGCCCAGAAAAAATGCTATGTCTTACACTGGATACATCATAAATGGGCAACGGTTTCACATAAAGAGTGCTAAAAAATCAACCAAAAATAGTGGTGTTGTTGTACATGCTAGAACATTATGTAGATCCAGTGCAAAAGATCAATCTCAAGTTGTGAACCTAGTTCCTTATAGAAACCATCTTATTAGATTATTGTGTTTACTAACTTCCAATCTTTCGATGCGACTAGGTAAATATTCGTAA
Coding sequence (CDS)
ATGAAGATATTGAAAGGTTATGTACGAAACAAAGCACAGTCAGAAGGGTGTATTGCAGCATGTTACTTAACTGATGAATGTGTTAACTTTTCAAACAAGTATTTTAAACAGTCAGTTAAGGTAGTGAATAAACAACAACGTAATGAAGATTACCAAAATGATGTCATAGTAGAGGGTCTCCCTATATCTTCTGGAACTCCAATTGTATTATTTGATTATGTACTTGAGAATGTACATCGATATGTTCTATTCAATACAGCAGAGATTAAATTAGATTCATCTGTTGAAGGTTACTCTGACTTGTTAAAATGGCTTGCAAATGGGCCCAGAAAAAATGCTATGTCTTACACTGGATACATCATAAATGGGCAACGGTTTCACATAAAGAGTGCTAAAAAATCAACCAAAAATAGTGGTGTTGTTGTACATGCTAGAACATTATGTAGATCCAGTGCAAAAGATCAATCTCAAGTTGTGAACCTAGTTCCTTATAGAAACCATCTTATTAGATTATTGTGTTTACTAACTTCCAATCTTTCGATGCGACTAGGTAAATATTCGTAA
Protein sequence
MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGLPISSGTPIVLFDYVLENVHRYVLFNTAEIKLDSSVEGYSDLLKWLANGPRKNAMSYTGYIINGQRFHIKSAKKSTKNSGVVVHARTLCRSSAKDQSQVVNLVPYRNHLIRLLCLLTSNLSMRLGKYS
Homology
BLAST of Bhi01G002059 vs. NCBI nr
Match:
KAA0054504.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 133/174 (76.44%), Postives = 154/174 (88.51%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYV+NKA+ EGCIAACYL DECV+FSNKYFKQSV+VVN QQRNE+YQNDVI+EG
Sbjct: 1 MKVLKGYVQNKARPEGCIAACYLADECVDFSNKYFKQSVEVVNSQQRNEEYQNDVILEGR 60
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAEIKLDSSVEGYSDLLKWLANGPRKNAMSYTGYI 120
PISSGT + LFD VLEN HRYVLFNT+EI+LDSSVEGYS+LLKWLANGPRKNAMSYTGYI
Sbjct: 61 PISSGTLVELFDDVLENAHRYVLFNTSEIELDSSVEGYSELLKWLANGPRKNAMSYTGYI 120
Query: 121 INGQRFHIKSAKKSTKNSGVVVHARTLCRSSAKDQSQVVNLVPYRNHLIRLLCL 175
ING+RFH KS +KST+N+GV V A TLCRSSAKD+SQV+++V Y L ++ L
Sbjct: 121 INGKRFHTKSVEKSTQNNGVAVDATTLCRSSAKDKSQVMDVVTYYRVLQEIILL 174
BLAST of Bhi01G002059 vs. NCBI nr
Match:
KAA0060272.1 (uncharacterized protein E6C27_scaffold22G00390 [Cucumis melo var. makuwa])
HSP 1 Score: 268.1 bits (684), Expect = 5.8e-68
Identity = 130/174 (74.71%), Postives = 151/174 (86.78%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYVRNKA+ EGCIAACYL DECV+FSNKYFKQSV+VVN QQRNE+YQNDVI+EG
Sbjct: 1 MKVLKGYVRNKARPEGCIAACYLADECVDFSNKYFKQSVEVVNSQQRNEEYQNDVILEGR 60
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAEIKLDSSVEGYSDLLKWLANGPRKNAMSYTGYI 120
ISS T + LFD VLEN HRYVLFNT+EI+LDSSVEGYS+LLKWLANGPRKNAMSYTGY+
Sbjct: 61 SISSETSVELFDDVLENAHRYVLFNTSEIELDSSVEGYSELLKWLANGPRKNAMSYTGYV 120
Query: 121 INGQRFHIKSAKKSTKNSGVVVHARTLCRSSAKDQSQVVNLVPYRNHLIRLLCL 175
ING+RFH KS +KST+N+GV V A TLCRSS KD+SQV+++V Y L ++ L
Sbjct: 121 INGKRFHTKSVEKSTQNNGVAVDATTLCRSSVKDKSQVMDVVAYYGVLQEIILL 174
BLAST of Bhi01G002059 vs. NCBI nr
Match:
KAA0056210.1 (integrase [Cucumis melo var. makuwa])
HSP 1 Score: 266.9 bits (681), Expect = 1.3e-67
Identity = 132/175 (75.43%), Postives = 152/175 (86.86%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYVRNKA+ EGCIAACYL DECV+FSNKYFKQSV+VVN QQRNE+YQNDVI+EG
Sbjct: 1 MKVLKGYVRNKARPEGCIAACYLADECVDFSNKYFKQSVEVVNSQQRNEEYQNDVILEGR 60
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAEI-KLDSSVEGYSDLLKWLANGPRKNAMSYTGY 120
PISSGT + LFD VLEN HRYVLFNT+EI +LDS VEGY +LLKWLANGPRKNAMSYTGY
Sbjct: 61 PISSGTSVELFDDVLENAHRYVLFNTSEILELDSFVEGYFELLKWLANGPRKNAMSYTGY 120
Query: 121 IINGQRFHIKSAKKSTKNSGVVVHARTLCRSSAKDQSQVVNLVPYRNHLIRLLCL 175
IING+RFH KS +KST+N+GV V A TLCRSSAKD+SQV+++V Y L ++ L
Sbjct: 121 IINGKRFHTKSVEKSTQNNGVAVDATTLCRSSAKDKSQVMDVVAYYGVLQEIILL 175
BLAST of Bhi01G002059 vs. NCBI nr
Match:
KAA0058414.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 261.5 bits (667), Expect = 5.4e-66
Identity = 126/174 (72.41%), Postives = 149/174 (85.63%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYV+NKA+ +GCI CY DECV+FSNKYFKQSV+VVN QQR E+YQNDVI+E
Sbjct: 1 MKVLKGYVQNKARPKGCIGTCYSADECVDFSNKYFKQSVEVVNSQQRKEEYQNDVILEDR 60
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAEIKLDSSVEGYSDLLKWLANGPRKNAMSYTGYI 120
PISSGT + LFD VLEN HRYVLFNT+EI+LDSSVEGYS+LLKWLANGPRKNAMSYTGYI
Sbjct: 61 PISSGTSVELFDDVLENAHRYVLFNTSEIELDSSVEGYSELLKWLANGPRKNAMSYTGYI 120
Query: 121 INGQRFHIKSAKKSTKNSGVVVHARTLCRSSAKDQSQVVNLVPYRNHLIRLLCL 175
ING+RFH KS +KST+N+GV V A TLCRS+AKD+SQV+++V Y L ++ L
Sbjct: 121 INGKRFHTKSVEKSTQNNGVAVDATTLCRSNAKDKSQVMDVVAYYGVLQEIILL 174
BLAST of Bhi01G002059 vs. NCBI nr
Match:
TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])
HSP 1 Score: 255.4 bits (651), Expect = 3.9e-64
Identity = 134/215 (62.33%), Postives = 154/215 (71.63%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYVRNKA+ EGCIA+CYL DECV+FSNKYFKQSV+VVN QQRNE+YQNDVI+EG
Sbjct: 462 MKVLKGYVRNKARPEGCIASCYLADECVDFSNKYFKQSVEVVNSQQRNEEYQNDVILEGR 521
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAE-------------------------------- 120
PISSGT I LFD VLEN HRYVLFNT+E
Sbjct: 522 PISSGTSIELFDDVLENAHRYVLFNTSEVEPFIEIHMNELMVLDKRLEKDSNLLWKIHTE 581
Query: 121 ---------IKLDSSVEGYSDLLKWLANGPRKNAMSYTGYIINGQRFHIKSAKKSTKNSG 175
I+LDSSVEGYS+LLKWLANGPRKNAMSYTGYIING+RFH KS +KST+N+G
Sbjct: 582 QFPLWLKSKIELDSSVEGYSELLKWLANGPRKNAMSYTGYIINGKRFHTKSVEKSTQNNG 641
BLAST of Bhi01G002059 vs. ExPASy TrEMBL
Match:
A0A5A7UH86 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002840 PE=4 SV=1)
HSP 1 Score: 273.9 bits (699), Expect = 5.1e-70
Identity = 133/174 (76.44%), Postives = 154/174 (88.51%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYV+NKA+ EGCIAACYL DECV+FSNKYFKQSV+VVN QQRNE+YQNDVI+EG
Sbjct: 1 MKVLKGYVQNKARPEGCIAACYLADECVDFSNKYFKQSVEVVNSQQRNEEYQNDVILEGR 60
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAEIKLDSSVEGYSDLLKWLANGPRKNAMSYTGYI 120
PISSGT + LFD VLEN HRYVLFNT+EI+LDSSVEGYS+LLKWLANGPRKNAMSYTGYI
Sbjct: 61 PISSGTLVELFDDVLENAHRYVLFNTSEIELDSSVEGYSELLKWLANGPRKNAMSYTGYI 120
Query: 121 INGQRFHIKSAKKSTKNSGVVVHARTLCRSSAKDQSQVVNLVPYRNHLIRLLCL 175
ING+RFH KS +KST+N+GV V A TLCRSSAKD+SQV+++V Y L ++ L
Sbjct: 121 INGKRFHTKSVEKSTQNNGVAVDATTLCRSSAKDKSQVMDVVTYYRVLQEIILL 174
BLAST of Bhi01G002059 vs. ExPASy TrEMBL
Match:
A0A5A7UWP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00390 PE=4 SV=1)
HSP 1 Score: 268.1 bits (684), Expect = 2.8e-68
Identity = 130/174 (74.71%), Postives = 151/174 (86.78%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYVRNKA+ EGCIAACYL DECV+FSNKYFKQSV+VVN QQRNE+YQNDVI+EG
Sbjct: 1 MKVLKGYVRNKARPEGCIAACYLADECVDFSNKYFKQSVEVVNSQQRNEEYQNDVILEGR 60
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAEIKLDSSVEGYSDLLKWLANGPRKNAMSYTGYI 120
ISS T + LFD VLEN HRYVLFNT+EI+LDSSVEGYS+LLKWLANGPRKNAMSYTGY+
Sbjct: 61 SISSETSVELFDDVLENAHRYVLFNTSEIELDSSVEGYSELLKWLANGPRKNAMSYTGYV 120
Query: 121 INGQRFHIKSAKKSTKNSGVVVHARTLCRSSAKDQSQVVNLVPYRNHLIRLLCL 175
ING+RFH KS +KST+N+GV V A TLCRSS KD+SQV+++V Y L ++ L
Sbjct: 121 INGKRFHTKSVEKSTQNNGVAVDATTLCRSSVKDKSQVMDVVAYYGVLQEIILL 174
BLAST of Bhi01G002059 vs. ExPASy TrEMBL
Match:
A0A5A7UM47 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00020 PE=4 SV=1)
HSP 1 Score: 266.9 bits (681), Expect = 6.2e-68
Identity = 132/175 (75.43%), Postives = 152/175 (86.86%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYVRNKA+ EGCIAACYL DECV+FSNKYFKQSV+VVN QQRNE+YQNDVI+EG
Sbjct: 1 MKVLKGYVRNKARPEGCIAACYLADECVDFSNKYFKQSVEVVNSQQRNEEYQNDVILEGR 60
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAEI-KLDSSVEGYSDLLKWLANGPRKNAMSYTGY 120
PISSGT + LFD VLEN HRYVLFNT+EI +LDS VEGY +LLKWLANGPRKNAMSYTGY
Sbjct: 61 PISSGTSVELFDDVLENAHRYVLFNTSEILELDSFVEGYFELLKWLANGPRKNAMSYTGY 120
Query: 121 IINGQRFHIKSAKKSTKNSGVVVHARTLCRSSAKDQSQVVNLVPYRNHLIRLLCL 175
IING+RFH KS +KST+N+GV V A TLCRSSAKD+SQV+++V Y L ++ L
Sbjct: 121 IINGKRFHTKSVEKSTQNNGVAVDATTLCRSSAKDKSQVMDVVAYYGVLQEIILL 175
BLAST of Bhi01G002059 vs. ExPASy TrEMBL
Match:
A0A5A7UTC4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G001270 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 2.6e-66
Identity = 126/174 (72.41%), Postives = 149/174 (85.63%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYV+NKA+ +GCI CY DECV+FSNKYFKQSV+VVN QQR E+YQNDVI+E
Sbjct: 1 MKVLKGYVQNKARPKGCIGTCYSADECVDFSNKYFKQSVEVVNSQQRKEEYQNDVILEDR 60
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAEIKLDSSVEGYSDLLKWLANGPRKNAMSYTGYI 120
PISSGT + LFD VLEN HRYVLFNT+EI+LDSSVEGYS+LLKWLANGPRKNAMSYTGYI
Sbjct: 61 PISSGTSVELFDDVLENAHRYVLFNTSEIELDSSVEGYSELLKWLANGPRKNAMSYTGYI 120
Query: 121 INGQRFHIKSAKKSTKNSGVVVHARTLCRSSAKDQSQVVNLVPYRNHLIRLLCL 175
ING+RFH KS +KST+N+GV V A TLCRS+AKD+SQV+++V Y L ++ L
Sbjct: 121 INGKRFHTKSVEKSTQNNGVAVDATTLCRSNAKDKSQVMDVVAYYGVLQEIILL 174
BLAST of Bhi01G002059 vs. ExPASy TrEMBL
Match:
A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)
HSP 1 Score: 255.4 bits (651), Expect = 1.9e-64
Identity = 134/215 (62.33%), Postives = 154/215 (71.63%), Query Frame = 0
Query: 1 MKILKGYVRNKAQSEGCIAACYLTDECVNFSNKYFKQSVKVVNKQQRNEDYQNDVIVEGL 60
MK+LKGYVRNKA+ EGCIA+CYL DECV+FSNKYFKQSV+VVN QQRNE+YQNDVI+EG
Sbjct: 462 MKVLKGYVRNKARPEGCIASCYLADECVDFSNKYFKQSVEVVNSQQRNEEYQNDVILEGR 521
Query: 61 PISSGTPIVLFDYVLENVHRYVLFNTAE-------------------------------- 120
PISSGT I LFD VLEN HRYVLFNT+E
Sbjct: 522 PISSGTSIELFDDVLENAHRYVLFNTSEVEPFIEIHMNELMVLDKRLEKDSNLLWKIHTE 581
Query: 121 ---------IKLDSSVEGYSDLLKWLANGPRKNAMSYTGYIINGQRFHIKSAKKSTKNSG 175
I+LDSSVEGYS+LLKWLANGPRKNAMSYTGYIING+RFH KS +KST+N+G
Sbjct: 582 QFPLWLKSKIELDSSVEGYSELLKWLANGPRKNAMSYTGYIINGKRFHTKSVEKSTQNNG 641
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0054504.1 | 1.1e-69 | 76.44 | putative TNP1-like transposon protein [Cucumis melo var. makuwa] | [more] |
KAA0060272.1 | 5.8e-68 | 74.71 | uncharacterized protein E6C27_scaffold22G00390 [Cucumis melo var. makuwa] | [more] |
KAA0056210.1 | 1.3e-67 | 75.43 | integrase [Cucumis melo var. makuwa] | [more] |
KAA0058414.1 | 5.4e-66 | 72.41 | putative TNP1-like transposon protein [Cucumis melo var. makuwa] | [more] |
TYK07512.1 | 3.9e-64 | 62.33 | uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UH86 | 5.1e-70 | 76.44 | Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5A7UWP5 | 2.8e-68 | 74.71 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7UM47 | 6.2e-68 | 75.43 | Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00020 PE=4 ... | [more] |
A0A5A7UTC4 | 2.6e-66 | 72.41 | Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5D3DCM2 | 1.9e-64 | 62.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |