Bhi01G002042 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G002042
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr1: 64787785 .. 64788105 (-)
RNA-Seq Expression	Bhi01G002042
Synteny	Bhi01G002042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACTAAGAACACTAAGAATCCCAAACCTCCTACTGCTGATGCGGAAACATCTCCATCTTCTCCACAATCCTTCAACCGACGCTTGACCATTGTGGAAGCTGCACTTGAAGAACAAGGCTCTTGGCTACTAGATGTACAATCCAAGATGGTTGCTCTAATGGCAATGATGGCTAGAATTCAACAAGCTGTAGAATTCCTCACTCAAGAAAAGGGCAATGACACTACTGCCACTATCCAAGAACAAAATTTCAGACATTTGCATATTCAAGAAAAGGATAATCCGTATCACCCCGTTTTTGCCACTGTCCAAGAATAG

mRNA sequence

ATGGTGACTAAGAACACTAAGAATCCCAAACCTCCTACTGCTGATGCGGAAACATCTCCATCTTCTCCACAATCCTTCAACCGACGCTTGACCATTGTGGAAGCTGCACTTGAAGAACAAGGCTCTTGGCTACTAGATGTACAATCCAAGATGGTTGCTCTAATGGCAATGATGGCTAGAATTCAACAAGCTGTAGAATTCCTCACTCAAGAAAAGGGCAATGACACTACTGCCACTATCCAAGAACAAAATTTCAGACATTTGCATATTCAAGAAAAGGATAATCCGTATCACCCCGTTTTTGCCACTGTCCAAGAATAG

Coding sequence (CDS)

ATGGTGACTAAGAACACTAAGAATCCCAAACCTCCTACTGCTGATGCGGAAACATCTCCATCTTCTCCACAATCCTTCAACCGACGCTTGACCATTGTGGAAGCTGCACTTGAAGAACAAGGCTCTTGGCTACTAGATGTACAATCCAAGATGGTTGCTCTAATGGCAATGATGGCTAGAATTCAACAAGCTGTAGAATTCCTCACTCAAGAAAAGGGCAATGACACTACTGCCACTATCCAAGAACAAAATTTCAGACATTTGCATATTCAAGAAAAGGATAATCCGTATCACCCCGTTTTTGCCACTGTCCAAGAATAG

Protein sequence

MVTKNTKNPKPPTADAETSPSSPQSFNRRLTIVEAALEEQGSWLLDVQSKMVALMAMMARIQQAVEFLTQEKGNDTTATIQEQNFRHLHIQEKDNPYHPVFATVQE

Homology

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BLAST of Bhi01G002042 vs. ExPASy TrEMBL
Match: A0A0A0KE02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G416830 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.0e-08
Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 22  SPQSFNRRLTIVEAALEEQGSWLLDVQSKMVALMAMMARIQQAVEFLTQEKGNDTTATIQ 81
           SPQSFN RL  VE  L+ +   LLDVQSKMV ++A +A IQ+A+E LTQ+KG  T A +Q
Sbjct: 8   SPQSFNWRLNHVEQPLKSKIHRLLDVQSKMVGILASVAEIQRAIELLTQDKGKSTAAPVQ 67

Query: 82  EQNFRHLHIQEKDNPYHPVF 102
             N   L +    NP+  +F
Sbjct: 68  APNSNPLPL----NPFGQIF 83

The following BLAST results are available for this feature:

BLAST of Bhi01G002042 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01G002042 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01G002042 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01G002042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE02	7.0e-08	48.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G416830 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M002042	Bhi01M002042	mRNA