Bhi01G001859 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G001859
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr1: 58300685 .. 58301957 (-)
RNA-Seq Expression	Bhi01G001859
Synteny	Bhi01G001859

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTCCATGTCCTTATCGCCATAAATCAAATTGTAAAAGCAACTGTTGTTTTTCCCCCTCATCCCTCTATAAATATCCCCCAATTATCCACGCCGAAGCTTCACTTCTCTCATTTCCCTCTCTGAAATCAATTCCTCATTCTCTCGATTCCCATCCTTCCAAATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGGTTTCAAACCCTATTCCCCGATGCAATCTCCTCCAAATCTTCGCCAAGTTCTTCCGTTTCCTAGAGCTTTCCTTTCTACTGCTTTTCCTTTCTTGGATCCTCTCTCGCCTTCCAATCGCCCTCACAGTCTCCGCCGAGTATTTCGGTAAACTCTTCGCCTTCGTCGCTACTCCTCTCTTCGGATTCCTCCTCTGCAACGCCATTATCGTCGCTCTCGTAGCCAAGCCTACTCAATTCCCACGCCCTGCCAGCAGCACCAGCAGCACCAGCAGCGCCGAAGCCGATCGGATTTACGAAGACCTTATTGAAAAAACCGGAAGTGGTGACCTAACTGATTCGCTCTCGGAGGAGGTGGAGATTGTGTACCAGGACAAACAGATCATTGCGGAGGGGATTAATTCAATCGATCGTGAAATTGAAGTGAAAAACACGGATCTGGAGACGGAATCGGGATTAGGTCATTCGAAAGTGATGTTGAGGACGTTATCGGAGAAACTTAACCGAGAATGCGTGATAACAGAGAGGGAGAAGCTTCGGAGATCGGAGACGGAGAAGTGCCGGAATCTGGAGCATTCGAATGACATTTTGTACCACCAGGATGATTTGAGCAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCGAAAGAGAAGAAGTTTCGACGGGAAGAATCTTCCGCCATTGTTGTACTCCACTGCGACGGTTAATCTCCGGCGAAAATAAGACGACTAAAAGTAAGAAAAAGGAAAAAAGAAAAAAGAAAAGAAAAAGAAAAAAGAGAACTCGGGTGTACTATTTGATCCCTGTGCAATGTACAGAGTAAAATTTCTTTTACCTAGAGAAGGGTAAAATTGGTATTTGAACTTCCTTCTTTCTTTCTTAGTTGGAGTTGGGGTTCTATTGTCTGTTACTCGTTCTACTGTTGCTTGGTGGACTTGCACTTGACAATTCATCTGTCGCGCTAATTCGAGATCTACTGGATGGCAATTTAGATCACCTTTCATCACCATATAAGTCTCCTAGGTTCCATTTTTTTAATTTTATTTTATTAAATTAAGTTATTTTTTTCTATA

mRNA sequence

CAATTCCATGTCCTTATCGCCATAAATCAAATTGTAAAAGCAACTGTTGTTTTTCCCCCTCATCCCTCTATAAATATCCCCCAATTATCCACGCCGAAGCTTCACTTCTCTCATTTCCCTCTCTGAAATCAATTCCTCATTCTCTCGATTCCCATCCTTCCAAATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGGTTTCAAACCCTATTCCCCGATGCAATCTCCTCCAAATCTTCGCCAAGTTCTTCCGTTTCCTAGAGCTTTCCTTTCTACTGCTTTTCCTTTCTTGGATCCTCTCTCGCCTTCCAATCGCCCTCACAGTCTCCGCCGAGTATTTCGGTAAACTCTTCGCCTTCGTCGCTACTCCTCTCTTCGGATTCCTCCTCTGCAACGCCATTATCGTCGCTCTCGTAGCCAAGCCTACTCAATTCCCACGCCCTGCCAGCAGCACCAGCAGCACCAGCAGCGCCGAAGCCGATCGGATTTACGAAGACCTTATTGAAAAAACCGGAAGTGGTGACCTAACTGATTCGCTCTCGGAGGAGGTGGAGATTGTGTACCAGGACAAACAGATCATTGCGGAGGGGATTAATTCAATCGATCGTGAAATTGAAGTGAAAAACACGGATCTGGAGACGGAATCGGGATTAGGTCATTCGAAAGTGATGTTGAGGACGTTATCGGAGAAACTTAACCGAGAATGCGTGATAACAGAGAGGGAGAAGCTTCGGAGATCGGAGACGGAGAAGTGCCGGAATCTGGAGCATTCGAATGACATTTTGTACCACCAGGATGATTTGAGCAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCGAAAGAGAAGAAGTTTCGACGGGAAGAATCTTCCGCCATTGTTGTACTCCACTGCGACGGTTAATCTCCGGCGAAAATAAGACGACTAAAAGTAAGAAAAAGGAAAAAAGAAAAAAGAAAAGAAAAAGAAAAAAGAGAACTCGGGTGTACTATTTGATCCCTGTGCAATGTACAGAGTAAAATTTCTTTTACCTAGAGAAGGGTAAAATTGGTATTTGAACTTCCTTCTTTCTTTCTTAGTTGGAGTTGGGGTTCTATTGTCTGTTACTCGTTCTACTGTTGCTTGGTGGACTTGCACTTGACAATTCATCTGTCGCGCTAATTCGAGATCTACTGGATGGCAATTTAGATCACCTTTCATCACCATATAAGTCTCCTAGGTTCCATTTTTTTAATTTTATTTTATTAAATTAAGTTATTTTTTTCTATA

Coding sequence (CDS)

ATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGGTTTCAAACCCTATTCCCCGATGCAATCTCCTCCAAATCTTCGCCAAGTTCTTCCGTTTCCTAGAGCTTTCCTTTCTACTGCTTTTCCTTTCTTGGATCCTCTCTCGCCTTCCAATCGCCCTCACAGTCTCCGCCGAGTATTTCGGTAAACTCTTCGCCTTCGTCGCTACTCCTCTCTTCGGATTCCTCCTCTGCAACGCCATTATCGTCGCTCTCGTAGCCAAGCCTACTCAATTCCCACGCCCTGCCAGCAGCACCAGCAGCACCAGCAGCGCCGAAGCCGATCGGATTTACGAAGACCTTATTGAAAAAACCGGAAGTGGTGACCTAACTGATTCGCTCTCGGAGGAGGTGGAGATTGTGTACCAGGACAAACAGATCATTGCGGAGGGGATTAATTCAATCGATCGTGAAATTGAAGTGAAAAACACGGATCTGGAGACGGAATCGGGATTAGGTCATTCGAAAGTGATGTTGAGGACGTTATCGGAGAAACTTAACCGAGAATGCGTGATAACAGAGAGGGAGAAGCTTCGGAGATCGGAGACGGAGAAGTGCCGGAATCTGGAGCATTCGAATGACATTTTGTACCACCAGGATGATTTGAGCAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCGAAAGAGAAGAAGTTTCGACGGGAAGAATCTTCCGCCATTGTTGTACTCCACTGCGACGGTTAA

Protein sequence

MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFGKLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSGDLTDSLSEEVEIVYQDKQIIAEGINSIDREIEVKNTDLETESGLGHSKVMLRTLSEKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

Homology

[Close]

BLAST of Bhi01G001859 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 115.5 bits (288), Expect = 5.9e-26
Identity = 95/262 (36.26%), Postives = 150/262 (57.25%), Query Frame = 0


Query: 1   MDFFFFD--KAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEY 60
           MD F FD  KAEK +  + R N      +FFR  E+   LLF+ W  S+LP  + +S  +
Sbjct: 1   MDSFDFDNVKAEK-AKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAF 60

Query: 61  FGKLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLI----- 120
             ++ A ++TPLF FLL N+I+V L+ K +       +T++ +SAE + IY+  +     
Sbjct: 61  LRRIAAVISTPLFVFLLGNSIVVVLLTKSSD-----QTTTAVASAETE-IYQAFVRSVEN 120

Query: 121 -EKTGSGDLTDSLSEEVEIVYQDKQIIAEGINS---IDREIEVKNTDLETESGLGHSKVM 180
             K    DLT+       IVY DKQ+I   ++S   +  +  + + +++++S   HSKV 
Sbjct: 121 RSKPSDEDLTEG------IVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSS-PHSKVY 180

Query: 181 LRTLSEKLNRE----CVITEREKLRRSETEK-CRNLEHSNDI----LYHQDDLSSEEFQR 240
            R+ S+   ++     ++  +  L+RSETEK C+  E+ +D      Y +DDLS+EEFQ+
Sbjct: 181 GRSKSDVSGKQSSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQK 240

Query: 241 KIEAFIAKEKKFRREESSAIVV 243
            IEAFIAK++ FRR+ES A+VV
Sbjct: 241 TIEAFIAKQRMFRRQESLAVVV 248

[Close]

BLAST of Bhi01G001859 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 8.0e-07
Identity = 60/244 (24.59%), Postives = 115/244 (47.13%), Query Frame = 0


Query: 8   KAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFGKLFAFVA 67
           K EK S  I     ++ F   FR  EL  L++ +S +    P ++ +S + F +   F+ 
Sbjct: 10  KMEK-SRGILNFQAIRSFTSLFRLFELLLLVILISKL--SFP-SVKISGDIFKEAAVFLV 69

Query: 68  TPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSGDLTDSLSE 127
           +P F F + NAI++ L+AK  ++      + + + A ++ +Y++ + K+          +
Sbjct: 70  SPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKS---------EK 129

Query: 128 EVEIVYQDK----------QIIAEGINSIDREIEVKNTDLETESGLGHSKVMLRTLSEKL 187
           +  +VY  K          + ++ G +   +  E     LE+ +G    K M R +SEK 
Sbjct: 130 KKPVVYATKTEQLKKPSGGKRVSFGRSQSHKAFEAVK-PLESTNG---EKNMKRYVSEKH 189

Query: 188 NRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRREES 242
            R C   ++  +R  + E               D +S+E+F+ KIEAFIA++K+ +++E 
Sbjct: 190 MRVCDSDKKVVVRVKKPE---------------DGMSNEQFRTKIEAFIARQKRIQKDEE 221

[Close]

BLAST of Bhi01G001859 vs. NCBI nr
Match: XP_038888396.1 (uncharacterized protein LOC120078241 [Benincasa hispida])

HSP 1 Score: 466.1 bits (1198), Expect = 1.9e-127
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60
           MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG
Sbjct: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60

Query: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSGD 120
           KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSGD
Sbjct: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSGD 120

Query: 121 LTDSLSEEVEIVYQDKQIIAEGINSIDREIEVKNTDLETESGLGHSKVMLRTLSEKLNRE 180
           LTDSLSEEVEIVYQDKQIIAEGINSIDREIEVKNTDLETESGLGHSKVMLRTLSEKLNRE
Sbjct: 121 LTDSLSEEVEIVYQDKQIIAEGINSIDREIEVKNTDLETESGLGHSKVMLRTLSEKLNRE 180

Query: 181 CVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 248
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of Bhi01G001859 vs. NCBI nr
Match: XP_008452094.1 (PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 375.6 bits (963), Expect = 3.4e-100
Identity = 208/253 (82.21%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60
           MDFFFFDKAEK+S PIPRCNLLQIF+KFFRFLELSFLLL LSWI SRLPIAL +SA+YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120
           KLFAF+ATPLFGFLLCNAIIVALVAKP+QF RPA+S       + DRIYEDLIEKTG+G 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSD------QTDRIYEDLIEKTGTGS 120

Query: 121 DLTDSLSEEV-EIVYQDKQIIAEG----INSIDREIEVKNTDLETESGLGHSKVMLRTLS 180
           DLTDS SEEV EIVYQDK+IIAEG      S D EIE+KNTDLE++SGLGHSKV+LR+LS
Sbjct: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLS 180

Query: 181 EKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRR 240
           EKLNRECV T+ EKLRRSETEKCRNLE+SNDILY+QDDLSSEEFQRKIEAFIAKEKKFRR
Sbjct: 181 EKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRR 240

Query: 241 EESSAIVVLHCDG 248
           EESSAIVVLHCDG
Sbjct: 241 EESSAIVVLHCDG 247

[Close]

BLAST of Bhi01G001859 vs. NCBI nr
Match: KAA0044789.1 (putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 368.2 bits (944), Expect = 5.4e-98
Identity = 205/253 (81.03%), Postives = 223/253 (88.14%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60
           MDFFFFDKAEK+S PIPRCNLLQIF+KFFR LELSFLLL LSWI SRLPIAL +SA+YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120
           KLFAF+ATPLFGFLLCNAIIVALVAKP+QF RPA+S       + DRIYEDLIE TG+G 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSD------QTDRIYEDLIENTGTGS 120

Query: 121 DLTDSLSEEV-EIVYQDKQIIAEG----INSIDREIEVKNTDLETESGLGHSKVMLRTLS 180
           DLTDS SEEV EIVYQDK+IIAEG      S D EIE+KNTDLE++SGL HSKV+LR+LS
Sbjct: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLS 180

Query: 181 EKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRR 240
           EKLNRECV T+ EKLRRSETEKCRNLE+SNDILY+QDDLSSEEFQRKIEAFIAKEKKFRR
Sbjct: 181 EKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRR 240

Query: 241 EESSAIVVLHCDG 248
           EESSAIVVLHCDG
Sbjct: 241 EESSAIVVLHCDG 247

[Close]

BLAST of Bhi01G001859 vs. NCBI nr
Match: XP_011653156.1 (uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical protein Csa_015101 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 1.6e-94
Identity = 204/253 (80.63%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60
           MDFFFFDKAEK+S PIPRCNLLQIF+KFFRFLELSFLLL LSWI SRLPIAL +SAEY  
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120
           KLFAF+ATPLFGFLLCNAIIVALVAKP+QF R  +S       E  RIYEDLI+KTG+G 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTS-------ETHRIYEDLIDKTGTGS 120

Query: 121 DLTDSLSEEV-EIVYQDKQIIAEG----INSIDREIEVKNTDLETESGLGHSKVMLRTLS 180
           DLTDS SEEV EIVYQDKQIIAEG      S D EIEVKNTDLE+ESGLG SKV+LR+LS
Sbjct: 121 DLTDSASEEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLS 180

Query: 181 EKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRR 240
           EKLNRECV T+ EKLRRSETEKC NLE +NDIL +QDDLSSEEFQRKIEAFIAKEKKFRR
Sbjct: 181 EKLNRECVKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRR 240

Query: 241 EESSAIVVLHCDG 248
           EESSAIVVLHCDG
Sbjct: 241 EESSAIVVLHCDG 246

[Close]

BLAST of Bhi01G001859 vs. NCBI nr
Match: XP_022136879.1 (uncharacterized protein LOC111008461, partial [Momordica charantia])

HSP 1 Score: 317.4 bits (812), Expect = 1.1e-82
Identity = 179/249 (71.89%), Postives = 204/249 (81.93%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPR--CNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEY 60
           MDFFFFDKAEK    IPR  CNLLQIFAK FRFLEL  LL+FLSWILSRLP A+ +S EY
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FGKLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGS 120
           F KLFAFVA+PLFGF+LCNAIIVALVAKP+Q        +     E DR+YEDLI K+G+
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQL--SGRRVAVGDGGETDRLYEDLIVKSGN 120

Query: 121 GDLTDSLSEEVEIVYQDKQIIAEGINSIDREIEVKNTDLETESGLGHSKVMLRTLSEKLN 180
           GDL +S SE+ EIV+QDK+IIAE INSIDR++EVK+TD E ESG+ H KV+ RTLSEK+ 
Sbjct: 121 GDLPESPSEDGEIVFQDKEIIAEAINSIDRDVEVKSTDPEAESGIDHPKVIRRTLSEKIK 180

Query: 181 RECVITEREKLRRSETEKCRN-LEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRREES 240
           REC  T+ EKLRRSETEKCRN LE S+DI+Y+QDDLSSEEFQRKIEAFIA+EKKFRREES
Sbjct: 181 RECSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFRREES 240

Query: 241 SAIVVLHCD 247
           SAI VLH D
Sbjct: 241 SAI-VLHSD 246

[Close]

BLAST of Bhi01G001859 vs. ExPASy TrEMBL
Match: A0A5D3CYU3 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005060 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.6e-100
Identity = 208/253 (82.21%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60
           MDFFFFDKAEK+S PIPRCNLLQIF+KFFRFLELSFLLL LSWI SRLPIAL +SA+YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120
           KLFAF+ATPLFGFLLCNAIIVALVAKP+QF RPA+S       + DRIYEDLIEKTG+G 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSD------QTDRIYEDLIEKTGTGS 120

Query: 121 DLTDSLSEEV-EIVYQDKQIIAEG----INSIDREIEVKNTDLETESGLGHSKVMLRTLS 180
           DLTDS SEEV EIVYQDK+IIAEG      S D EIE+KNTDLE++SGLGHSKV+LR+LS
Sbjct: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLS 180

Query: 181 EKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRR 240
           EKLNRECV T+ EKLRRSETEKCRNLE+SNDILY+QDDLSSEEFQRKIEAFIAKEKKFRR
Sbjct: 181 EKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRR 240

Query: 241 EESSAIVVLHCDG 248
           EESSAIVVLHCDG
Sbjct: 241 EESSAIVVLHCDG 247

[Close]

BLAST of Bhi01G001859 vs. ExPASy TrEMBL
Match: A0A1S3BT40 (uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.6e-100
Identity = 208/253 (82.21%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60
           MDFFFFDKAEK+S PIPRCNLLQIF+KFFRFLELSFLLL LSWI SRLPIAL +SA+YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120
           KLFAF+ATPLFGFLLCNAIIVALVAKP+QF RPA+S       + DRIYEDLIEKTG+G 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSD------QTDRIYEDLIEKTGTGS 120

Query: 121 DLTDSLSEEV-EIVYQDKQIIAEG----INSIDREIEVKNTDLETESGLGHSKVMLRTLS 180
           DLTDS SEEV EIVYQDK+IIAEG      S D EIE+KNTDLE++SGLGHSKV+LR+LS
Sbjct: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLS 180

Query: 181 EKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRR 240
           EKLNRECV T+ EKLRRSETEKCRNLE+SNDILY+QDDLSSEEFQRKIEAFIAKEKKFRR
Sbjct: 181 EKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRR 240

Query: 241 EESSAIVVLHCDG 248
           EESSAIVVLHCDG
Sbjct: 241 EESSAIVVLHCDG 247

[Close]

BLAST of Bhi01G001859 vs. ExPASy TrEMBL
Match: A0A5A7TU70 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00800 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.6e-98
Identity = 205/253 (81.03%), Postives = 223/253 (88.14%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60
           MDFFFFDKAEK+S PIPRCNLLQIF+KFFR LELSFLLL LSWI SRLPIAL +SA+YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120
           KLFAF+ATPLFGFLLCNAIIVALVAKP+QF RPA+S       + DRIYEDLIE TG+G 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSD------QTDRIYEDLIENTGTGS 120

Query: 121 DLTDSLSEEV-EIVYQDKQIIAEG----INSIDREIEVKNTDLETESGLGHSKVMLRTLS 180
           DLTDS SEEV EIVYQDK+IIAEG      S D EIE+KNTDLE++SGL HSKV+LR+LS
Sbjct: 121 DLTDSASEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLS 180

Query: 181 EKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRR 240
           EKLNRECV T+ EKLRRSETEKCRNLE+SNDILY+QDDLSSEEFQRKIEAFIAKEKKFRR
Sbjct: 181 EKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRR 240

Query: 241 EESSAIVVLHCDG 248
           EESSAIVVLHCDG
Sbjct: 241 EESSAIVVLHCDG 247

[Close]

BLAST of Bhi01G001859 vs. ExPASy TrEMBL
Match: A0A0A0KY10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 7.9e-95
Identity = 204/253 (80.63%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60
           MDFFFFDKAEK+S PIPRCNLLQIF+KFFRFLELSFLLL LSWI SRLPIAL +SAEY  
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120
           KLFAF+ATPLFGFLLCNAIIVALVAKP+QF R  +S       E  RIYEDLI+KTG+G 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTS-------ETHRIYEDLIDKTGTGS 120

Query: 121 DLTDSLSEEV-EIVYQDKQIIAEG----INSIDREIEVKNTDLETESGLGHSKVMLRTLS 180
           DLTDS SEEV EIVYQDKQIIAEG      S D EIEVKNTDLE+ESGLG SKV+LR+LS
Sbjct: 121 DLTDSASEEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLS 180

Query: 181 EKLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRR 240
           EKLNRECV T+ EKLRRSETEKC NLE +NDIL +QDDLSSEEFQRKIEAFIAKEKKFRR
Sbjct: 181 EKLNRECVKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRR 240

Query: 241 EESSAIVVLHCDG 248
           EESSAIVVLHCDG
Sbjct: 241 EESSAIVVLHCDG 246

[Close]

BLAST of Bhi01G001859 vs. ExPASy TrEMBL
Match: A0A6J1C5K3 (uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008461 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.3e-83
Identity = 179/249 (71.89%), Postives = 204/249 (81.93%), Query Frame = 0


Query: 1   MDFFFFDKAEKVSNPIPR--CNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEY 60
           MDFFFFDKAEK    IPR  CNLLQIFAK FRFLEL  LL+FLSWILSRLP A+ +S EY
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FGKLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGS 120
           F KLFAFVA+PLFGF+LCNAIIVALVAKP+Q        +     E DR+YEDLI K+G+
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQL--SGRRVAVGDGGETDRLYEDLIVKSGN 120

Query: 121 GDLTDSLSEEVEIVYQDKQIIAEGINSIDREIEVKNTDLETESGLGHSKVMLRTLSEKLN 180
           GDL +S SE+ EIV+QDK+IIAE INSIDR++EVK+TD E ESG+ H KV+ RTLSEK+ 
Sbjct: 121 GDLPESPSEDGEIVFQDKEIIAEAINSIDRDVEVKSTDPEAESGIDHPKVIRRTLSEKIK 180

Query: 181 RECVITEREKLRRSETEKCRN-LEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRREES 240
           REC  T+ EKLRRSETEKCRN LE S+DI+Y+QDDLSSEEFQRKIEAFIA+EKKFRREES
Sbjct: 181 RECSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFRREES 240

Query: 241 SAIVVLHCD 247
           SAI VLH D
Sbjct: 241 SAI-VLHSD 246

The following BLAST results are available for this feature:

BLAST of Bhi01G001859 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66440.1	5.9e-26	36.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G34560.1	8.0e-07	24.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

BLAST of Bhi01G001859 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi01G001859 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888396.1	1.9e-127	100.00	uncharacterized protein LOC120078241 [Benincasa hispida]	[more]
XP_008452094.1	3.4e-100	82.21	PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putat...	[more]
KAA0044789.1	5.4e-98	81.03	putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [C...	[more]
XP_011653156.1	1.6e-94	80.63	uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical ...	[more]
XP_022136879.1	1.1e-82	71.89	uncharacterized protein LOC111008461, partial [Momordica charantia]	[more]

BLAST of Bhi01G001859 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYU3	1.6e-100	82.21	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A1S3BT40	1.6e-100	82.21	uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=...	[more]
A0A5A7TU70	2.6e-98	81.03	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A0A0KY10	7.9e-95	80.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1	[more]
A0A6J1C5K3	5.3e-83	71.89	uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 8..244
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 8..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M001859	Bhi01M001859	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity