Bhi01G001677 (gene) Wax gourd (B227) v1

Overview
NameBhi01G001677
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Description60S ribosomal protein L36
Locationchr1: 51647158 .. 51648965 (+)
RNA-Seq ExpressionBhi01G001677
SyntenyBhi01G001677
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAAGAAAACCCATTAACATTTATATGAGTAAAAGCCCAATAACTTTACCAGAGAGAAAGCCCAAAATACCCTTTAGAAACCAATCCTTATAAGAAAGCTGCCATAACCTAGAACTTCACTTCCCCGCCTCCGGTCAATAAGAGAAGGTACGTCGACTCTTCCCTTCTTCTTCTCTGTCCAACCAGATCGCTAAAATGAAATTTATTTGTGATTATTCAATATTCTATAGAAAAAAATCTTAATGCTATCTTGCTGAAGTTTTGTACTATTATTTCCCTGGATCAAGCGAGTAATTCCCAGCATTTTTGTTCTCCGGTGAAAAGTCAGTCAAGTTTTTGGTACTCTTTACCATATTTGAGCTCCTGGTTCGCTGTAATTTGTGTTCATCGTATAAATGTATCCACTTTTTGAATAGGCAATGGCTCCGAAGCAACCGAATACTGGTCTCTTCGTGGGGCTTAACAAAGGACACGTAGTTACGAAGAAGGAATTGGCTCCGCGCCCCTCGGATCGTAAAGGAGTAAGTTGATTTTGTATTTCGTTAATCTAGGGTGTACATTGGGTAATCATAAACATTCTCCAAACTATTTCCTTTTTAAAATTTTTATTGAGTTGATTCCATTCGTCTCTTTTCTTACTTGGGGTTTTAGTGGTGGATGAAACTAGGGTTTGCCTGGGGAATAAATACCCTTGGTAGTGTCGATTTGATAAGATATTTTTAATAATTATTCTATGTTATATGGACTTAGCTTAATACTCTACAAAAGCTCTAAAGCAAGGAGATAAATCTTGATCGTACATTTGAATGTTTGTTCCTCACATAAGTGAATTGAAAGTCGGATGTGGACTGTGTTTGACTGTTTGGTTTGTTATCAGTTTCCTTCAATGATATTTTAGCTCTACCTTTTATAAGTTTTTATTTATTGTCTGCATGTGCTCAGTTAGATTGATAATGTTGAATGCTAGCAAAGGAGTCTGCTTTGTGAGGGTCTTGACCATATGCATATTACCATTTTGCATATAAAACAAATTGGAACTTCTTTTGTTCTGGACTATTGGTTTCTTTCAGAGCTATTTTAGCTGTTGGTGGATGGAAGTAATTGACACAAAATGATTAATGTTTGCTTGAATTCTGATTGTTACCATAGAAAAGTAGCAAAAGAGTTCTGTTTGTGAGGAATTTGATCCGGGAAGTTGCTGGCTTTGCCCCATATGAGAAGAGAATCACCGAGCTTCTTAAAGTTGGAAAAGATAAGAGAGCGCTAAAAGTGGCTAAGAGAAAGTTGGGAACTCACAAGCGAGCAAAGAAGAAGAGAGAAGAGATGTCCAGCGTTCTCCGCAAGATGAGGTATTTTCATATGGCTTTCAATTTTAACTCATTGTGATTGAATTTTATCCTTAATTCACTTCTGACGTGCTATCAACGGTAATACATAATTTAATTATGTTTTTTTCCATATACTAAAACTTTTTTCTTTGAATATCTTATTGATACAGAGCTGGTGGAGGTGGCGAGAAGAAGAAATGAAACTTGTGTGGTTAATTCCCATAATGTATAAGGACATGCTCTAGATTTGATATTTTTCTTATCCAGAAGGAAATTGAGTGGATTTTTGAACATTTTGTTAGATGAACTGTGATGTTATTAGAACTTATATTTAAATTTCTTCAAGTCGTTTTTTTAATTGCACCTTGCGGCCATTTGTATCTCTTTTGGTATAATTGCCAATTAGCAAGAATGTAATTCATCATTTAATTTAGCTTTTGAGAATGTTTTATTTGAAGGCAAAAAACTATTAATTGTTT

mRNA sequence

TGAAAGAAAACCCATTAACATTTATATGAGTAAAAGCCCAATAACTTTACCAGAGAGAAAGCCCAAAATACCCTTTAGAAACCAATCCTTATAAGAAAGCTGCCATAACCTAGAACTTCACTTCCCCGCCTCCGGTCAATAAGAGAAGGCAATGGCTCCGAAGCAACCGAATACTGGTCTCTTCGTGGGGCTTAACAAAGGACACGTAGTTACGAAGAAGGAATTGGCTCCGCGCCCCTCGGATCGTAAAGGAAAAAGTAGCAAAAGAGTTCTGTTTGTGAGGAATTTGATCCGGGAAGTTGCTGGCTTTGCCCCATATGAGAAGAGAATCACCGAGCTTCTTAAAGTTGGAAAAGATAAGAGAGCGCTAAAAGTGGCTAAGAGAAAGTTGGGAACTCACAAGCGAGCAAAGAAGAAGAGAGAAGAGATGTCCAGCGTTCTCCGCAAGATGAGAGCTGGTGGAGGTGGCGAGAAGAAGAAATGAAACTTGTGTGGTTAATTCCCATAATGTATAAGGACATGCTCTAGATTTGATATTTTTCTTATCCAGAAGGAAATTGAGTGGATTTTTGAACATTTTGTTAGATGAACTGTGATGTTATTAGAACTTATATTTAAATTTCTTCAAGTCGTTTTTTTAATTGCACCTTGCGGCCATTTGTATCTCTTTTGGTATAATTGCCAATTAGCAAGAATGTAATTCATCATTTAATTTAGCTTTTGAGAATGTTTTATTTGAAGGCAAAAAACTATTAATTGTTT

Coding sequence (CDS)

ATGGCTCCGAAGCAACCGAATACTGGTCTCTTCGTGGGGCTTAACAAAGGACACGTAGTTACGAAGAAGGAATTGGCTCCGCGCCCCTCGGATCGTAAAGGAAAAAGTAGCAAAAGAGTTCTGTTTGTGAGGAATTTGATCCGGGAAGTTGCTGGCTTTGCCCCATATGAGAAGAGAATCACCGAGCTTCTTAAAGTTGGAAAAGATAAGAGAGCGCTAAAAGTGGCTAAGAGAAAGTTGGGAACTCACAAGCGAGCAAAGAAGAAGAGAGAAGAGATGTCCAGCGTTCTCCGCAAGATGAGAGCTGGTGGAGGTGGCGAGAAGAAGAAATGA

Protein sequence

MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Homology
[Close]
BLAST of Bhi01G001677 vs. TAIR 10
Match: AT3G53740.2 (Ribosomal protein L36e family protein )

HSP 1 Score: 173.7 bits (439), Expect = 8.1e-44
Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGHVVT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGGG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of Bhi01G001677 vs. TAIR 10
Match: AT3G53740.3 (Ribosomal protein L36e family protein )

HSP 1 Score: 173.7 bits (439), Expect = 8.1e-44
Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGHVVT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGGG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of Bhi01G001677 vs. TAIR 10
Match: AT3G53740.4 (Ribosomal protein L36e family protein )

HSP 1 Score: 173.7 bits (439), Expect = 8.1e-44
Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGHVVT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGGG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of Bhi01G001677 vs. TAIR 10
Match: AT5G02450.1 (Ribosomal protein L36e family protein )

HSP 1 Score: 167.2 bits (422), Expect = 7.6e-42
Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 0 

Query: 8   TGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGHVVTK+E  PRP++RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G  EKKK
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108

[Close]
BLAST of Bhi01G001677 vs. TAIR 10
Match: AT2G37600.1 (Ribosomal protein L36e family protein )

HSP 1 Score: 164.1 bits (414), Expect = 6.4e-41
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 0 

Query: 8   TGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGHVVT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---GEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG    EKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

[Close]
BLAST of Bhi01G001677 vs. ExPASy Swiss-Prot
Match: Q9M352 (60S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-42
Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGHVVT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGGG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of Bhi01G001677 vs. ExPASy Swiss-Prot
Match: Q9LZ57 (60S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-40
Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 0 

Query: 8   TGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGHVVTK+E  PRP++RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G  EKKK
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108

[Close]
BLAST of Bhi01G001677 vs. ExPASy Swiss-Prot
Match: O80929 (60S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.1e-40
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 0 

Query: 8   TGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGHVVT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---GEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG    EKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

[Close]
BLAST of Bhi01G001677 vs. ExPASy Swiss-Prot
Match: P52866 (60S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 7.4e-34
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 1  MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
          MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGK+SKR  FVRNLIREVAGF PYEKRI
Sbjct: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60

Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 92
          TELLKVGKDKRALKV + K+G H +  K+ E
Sbjct: 61 TELLKVGKDKRALKVRQEKVG-HSQESKEEE 90

[Close]
BLAST of Bhi01G001677 vs. ExPASy Swiss-Prot
Match: Q9LRB8 (60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28
Identity = 69/96 (71.88%), Postives = 78/96 (81.25%), Query Frame = 0 

Query: 12  VGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKR 71
           VGLNKGH VTKK   PRPS RKG  S+RV  VR ++REVAG+APYE+R+ ELLKVGKDKR
Sbjct: 6   VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKR 65

Query: 72  ALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGE 108
           ALK+ KRKLGTH R KKKREEM+ VLRKM+A   GE
Sbjct: 66  ALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKGE 101

[Close]
BLAST of Bhi01G001677 vs. NCBI nr
Match: XP_038878930.1 (60S ribosomal protein L36-2-like [Benincasa hispida] >XP_038878942.1 60S ribosomal protein L36-2-like [Benincasa hispida] >XP_038878950.1 60S ribosomal protein L36-2-like [Benincasa hispida])

HSP 1 Score: 208.8 bits (530), Expect = 2.4e-50
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of Bhi01G001677 vs. NCBI nr
Match: XP_022923053.1 (60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923055.1 60S ribosomal protein L36-2-like isoform X2 [Cucurbita moschata] >XP_022923056.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022985002.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985003.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985004.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023552431.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.4 bits (529), Expect = 3.2e-50
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of Bhi01G001677 vs. NCBI nr
Match: KAG6576718.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.4 bits (529), Expect = 3.2e-50
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI
Sbjct: 648 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 707

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 708 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 757

[Close]
BLAST of Bhi01G001677 vs. NCBI nr
Match: KAG7014765.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.4 bits (529), Expect = 3.2e-50
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI
Sbjct: 2   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 61

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 62  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111

[Close]
BLAST of Bhi01G001677 vs. NCBI nr
Match: KAG7013242.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 2   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 61

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 62  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111

[Close]
BLAST of Bhi01G001677 vs. ExPASy TrEMBL
Match: A0A6J1JC29 (60S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111483099 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-50
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of Bhi01G001677 vs. ExPASy TrEMBL
Match: A0A6J1E5T2 (60S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111430843 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-50
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of Bhi01G001677 vs. ExPASy TrEMBL
Match: A0A6J1H2C5 (60S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.9e-50
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of Bhi01G001677 vs. ExPASy TrEMBL
Match: A0A6J1K6N3 (60S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111491152 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.9e-50
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of Bhi01G001677 vs. ExPASy TrEMBL
Match: A0A6J1HV53 (60S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111467732 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-49
Identity = 107/110 (97.27%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60
           MAPK PNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKHPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

The following BLAST results are available for this feature:
BLAST of Bhi01G001677 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53740.28.1e-4483.04Ribosomal protein L36e family protein [more]
AT3G53740.38.1e-4483.04Ribosomal protein L36e family protein [more]
AT3G53740.48.1e-4483.04Ribosomal protein L36e family protein [more]
AT5G02450.17.6e-4284.76Ribosomal protein L36e family protein [more]
AT2G37600.16.4e-4183.81Ribosomal protein L36e family protein [more]
BLAST of Bhi01G001677 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3521.1e-4283.0460S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1[more]
Q9LZ571.1e-4084.7660S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1[more]
O809299.1e-4083.8160S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1[more]
P528667.4e-3482.4260S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2[more]
Q9LRB81.6e-2871.8860S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1[more]
BLAST of Bhi01G001677 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038878930.12.4e-50100.0060S ribosomal protein L36-2-like [Benincasa hispida] >XP_038878942.1 60S ribosom... [more]
XP_022923053.13.2e-5099.0960S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1... [more]
KAG6576718.13.2e-5099.0960S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7014765.13.2e-5099.0960S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma... [more]
KAG7013242.11.2e-4998.1860S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma... [more]
BLAST of Bhi01G001677 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JC291.5e-5099.0960S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111483099 PE=3 SV=1[more]
A0A6J1E5T21.5e-5099.0960S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111430843 PE=3 SV=... [more]
A0A6J1H2C55.9e-5098.1860S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=... [more]
A0A6J1K6N35.9e-5098.1860S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111491152 PE=3 SV=1[more]
A0A6J1HV532.2e-4997.2760S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111467732 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000509Ribosomal protein L36ePFAMPF01158Ribosomal_L36ecoord: 8..101
e-value: 9.1E-43
score: 144.4
IPR000509Ribosomal protein L36ePANTHERPTHR1011460S RIBOSOMAL PROTEIN L36coord: 1..110
IPR000509Ribosomal protein L36ePROSITEPS01190RIBOSOMAL_L36Ecoord: 55..65
IPR038097Ribosomal protein L36e domain superfamilyGENE3D1.10.10.176060S ribosomal protein L36coord: 1..105
e-value: 2.0E-44
score: 152.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..110
NoneNo IPR availablePANTHERPTHR10114:SF1460S RIBOSOMAL PROTEIN L36-1-RELATEDcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001677Bhi01M001677mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome