Bhi01G001650 (gene) Wax gourd (B227) v1

Overview
NameBhi01G001650
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr1: 49980806 .. 49981290 (-)
RNA-Seq ExpressionBhi01G001650
SyntenyBhi01G001650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATAACCAGTATTATCCAAAAAGCCATTGACAAGTACTTCCAAACCCTTCTTCCCCACTTCCGTGAAGACCAGCCTCCGCTGCCCTACCCACCACTGGCCATCTCCTTTGCAGACCCAACAACCAGCCGCCAGACCCAGCAACCGGCGACCAGCGAACCAGCCACTACCCACCCAATCCAGTCGCGTGCAGATGAAGACGGCAACGAACCATTCAATACCCACCTGGTTCGGACGCATGCAGACGAGGGCGACAAGCGGCCGACCACTCGAATCCTGTCCGGCCGATCTCAGACGTTGCTAACCGACGCCTTGGAGCCACGATCTGCTATACCCACTGCCGACCGGTCCAAATCCGTGATGCCCAGCGCCGATCAGTTAAGTTTCCGTCCGTTGGGGTTGCTGCCGGCCTTCTCTCAGATCGATATCTCATCTCAACCTATGCCACACCAAAGGACAGATGGAAGAAGTATGGGTATTTTCTAG

mRNA sequence

ATATAACCAGTATTATCCAAAAAGCCATTGACAAGTACTTCCAAACCCTTCTTCCCCACTTCCGTGAAGACCAGCCTCCGCTGCCCTACCCACCACTGGCCATCTCCTTTGCAGACCCAACAACCAGCCGCCAGACCCAGCAACCGGCGACCAGCGAACCAGCCACTACCCACCCAATCCAGTCGCGTGCAGATGAAGACGGCAACGAACCATTCAATACCCACCTGGTTCGGACGCATGCAGACGAGGGCGACAAGCGGCCGACCACTCGAATCCTGTCCGGCCGATCTCAGACGTTGCTAACCGACGCCTTGGAGCCACGATCTGCTATACCCACTGCCGACCGGTCCAAATCCGTGATGCCCAGCGCCGATCAGTTAAGTTTCCGTCCGTTGGGGTTGCTGCCGGCCTTCTCTCAGATCGATATCTCATCTCAACCTATGCCACACCAAAGGACAGATGGAAGAAGTATGGGTATTTTCTAG

Coding sequence (CDS)

ATATAACCAGTATTATCCAAAAAGCCATTGACAAGTACTTCCAAACCCTTCTTCCCCACTTCCGTGAAGACCAGCCTCCGCTGCCCTACCCACCACTGGCCATCTCCTTTGCAGACCCAACAACCAGCCGCCAGACCCAGCAACCGGCGACCAGCGAACCAGCCACTACCCACCCAATCCAGTCGCGTGCAGATGAAGACGGCAACGAACCATTCAATACCCACCTGGTTCGGACGCATGCAGACGAGGGCGACAAGCGGCCGACCACTCGAATCCTGTCCGGCCGATCTCAGACGTTGCTAACCGACGCCTTGGAGCCACGATCTGCTATACCCACTGCCGACCGGTCCAAATCCGTGATGCCCAGCGCCGATCAGTTAAGTTTCCGTCCGTTGGGGTTGCTGCCGGCCTTCTCTCAGATCGATATCTCATCTCAACCTATGCCACACCAAAGGACAGATGGAAGAAGTATGGGTATTTTCTAG

Protein sequence

ITSIIQKAIDKYFQTLLPHFREDQPPLPYPPLAISFADPTTSRQTQQPATSEPATTHPIQSRADEDGNEPFNTHLVRTHADEGDKRPTTRILSGRSQTLLTDALEPRSAIPTADRSKSVMPSADQLSFRPLGLLPAFSQIDISSQPMPHQRTDGRSMGIF
Homology
[Close]
BLAST of Bhi01G001650 vs. NCBI nr
Match: XP_038881446.1 (uncharacterized protein LOC120072971 [Benincasa hispida])

HSP 1 Score: 149.4 bits (376), Expect = 2.6e-32
Identity = 98/180 (54.44%), Postives = 113/180 (62.78%), Query Frame = 0 

Query: 1   ITSIIQKAIDKYFQTLLPHFREDQPPLPYPPLAISFADPTTSRQTQQPATS--EPATTHP 60
           IT++IQKAID+YFQTLLPHFRED+PP PYPP A+S           +PA S  +P T   
Sbjct: 28  ITTVIQKAIDRYFQTLLPHFREDEPPPPYPPPAVSV----------EPAASFEDPTTRCN 87

Query: 61  IQSRADEDGNEPFNTHLVRTHADEGDKRPTTRILSGRSQTLLTDALEPR----------- 120
            QSRADE G  P     V+THA+E D+RP  R  S RSQTL T+A+E R           
Sbjct: 88  HQSRADE-GILP-----VQTHAEEVDQRPAVRNQSDRSQTLPTEAVEHRSVTPRADWTRS 147

Query: 121 ------SAIPTADRSKSVMPSADQLSFRPLGLLPAF-SQIDISSQPMPHQRTDGRSMGIF 161
                 SAIP  D S+SVM  ADQ SFRP G+ PAF SQI  SSQ +PHQRTDGR MGIF
Sbjct: 148 AMPELQSAIPDTDWSRSVMSDADQSSFRPSGVPPAFSSQIGASSQSLPHQRTDGRGMGIF 191

The following BLAST results are available for this feature:
BLAST of Bhi01G001650 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi01G001650 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi01G001650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038881446.12.6e-3254.44uncharacterized protein LOC120072971 [Benincasa hispida][more]
BLAST of Bhi01G001650 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001650Bhi01M001650mRNA