Bhi01G001493 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G001493
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	THO complex subunit 4D
Location	chr1: 43430773 .. 43441924 (-)
RNA-Seq Expression	Bhi01G001493
Synteny	Bhi01G001493

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATAATCTTCAGGTAACTTTTCTAATCTTTTTCTTTCTTTCTTTCTTTTCTCTCTCTATTTTTTTTTTTTTATATAAACTCTGGTCATTATGTGAATTTGATATGTCGTTTTACTGTTAGGTTATTTGTCAATCGGAGTTTTGAATGGAAATATTGTTGTTTTTTCTTTTTTTTTTTGAGAAGATGCGATCGGGATTCTCTTTTGTTATGTTTATAAGAATATGGTTGTTATGTGTGATTATGGATCTTGAAAGTGTTTTCGAAGTTGAAATCGAGCGAGGATGTTTGGTTCTTTTGTATGATGAACTATTGTTTCCTGCATAAAATGTTTTGTTAATAACCATCGTTCTATGTGTTTTTTTGACTTCATTTCTATTGTCTTTTACATTCTTGTATGTATTTTTTTCCCCTTATAAGTGGTGGTGAGTGTAGATATCTTTTTAACCCTTGGATGATGCTTATTTTCTTTTTTCTCATGCGTCTATTTCCTACTTCTCGGTTTTAGATCTGAAATCTGAGTTAATTGGACTGTCTTGAGTGTGTCTTTATTATAATTTCATTGATTTTGGAAGCAAATATATCATATATGGGCATGGATACCGCAGTTGGAGCAATCATGGACTGGCGTTTTCTTTTTCTAAAAAATCTGTTTACAACTCTACGTTTTGATTGCATGAATTCCAAAGTTTTAAGTTATTGAAAGGCTGGAGGACGATCTTAAAACAGAACATAAGAAACGAGAATTACATTTATTTTAGACTTTCTACTCTTTATCATCAGGACTATATTGTTTTCTTTTAATTATAAAATCATCATTATGGTCCAGGTCCACGTAAAAGAACCTGAAAGCTCATGGTGGAGTTTAGTTGGAAAAGAAACAGACCTACAGACTTAGGGATGGGGTTGTTTTATGAGTAGTTTTGTTTATTTATTGTCGTTTCAAAAGCTCGAGGTGAATCAAAATGGAATAAATTTGGGGAGCATAAATTACGAGGTGTCAGAAAAGCAGGGTTTCTTTCCTTTTGTCAAGTTGCACAATATGTAAATAATCGGTTAATTCCTATGTATTTGATATTATTTGAATAATTTAATTCTTTCAATTACAAGGATCCCACAACATTATGAAAACAATCTTTATAATCATTAATCACAATTTGGAGATCCAAGCAATAACTAGATATTACTTCTTCTATTTTTTCTCCATTATTGTACCCTTAGTCGTCCCCTCTACTTTAGCTCATTTTCATAGCTGTGATCTGTAAGCTTTATTTATTGTAATTGGTATAATCATTATGTTCTGTAATCATTGTGTGCTTTTTCATGAGTGTTTTTGTTTCTTTTTTTTTTTTTTAAAAAAATTAAATTCATGCTTATGCCTCACATTGTCTTGATGTTTATGCATTGCCTTACTATTACTTTTACCTTTACTAGTGTTATGAAACACATTGTTTTAGAAAAATCTACTTTGGCACTTTAGAGTCCTGGTTGGGCTGTAGTCAGGATGGGAGTTTGTGTTCTGTCGAAGATGGATGTTACAGTTGATTCATCAAATGAAGTATTGATTTATCAAGTTTCATGGAAGTGGTTGTTATTGTCAAAAAAAAAAAAATAAAAAAAGGAAAAAAAAAAAAGAACAAAGAAAGATCAAGTTTCGTGCAAGTATCATGATTAATGTTTATCTTACCTTTCTGCAGGACTTCTTTTCTATAGTTTCTTGTAATCTGTTTCCTCCTACCACACCAATGGCTACTCCTTTGGATATGTCATTAGAGGATGTGATAAAGAAGAGTAACCGTGAGAAGCTTAGAGCACGAGGTAGGGCCCGTCGTGGTCGTGGAGCAGGTGGGTCTTTTAATGGTGGAAGAGGAGTAGTGGTAGGATCAGTTCGCAGGGGTCCTCTCGGCATAAATGCACGGGCATCTGCTTACTCAATTCGCAAGGCAAGCTTTAAACTGTGATGTTTAATGCATATGCTTGAGAACCTGATATTCCTTGAAAATACATGCTCACGTGGATCTCAAATAACAACACTATAGTAACTTTAACAGAAGTGGATCAGTAAAATTGTTGTTCTGTGGAGAATCTCATTGGGGGTCACCCTCTGATCCGAATAGTCTTCTGGTGTATTCGTACCATTATCTTTGCAAATATTGAATACGTGTGGGTTATCTGGGTTATTTTCAAAGGACTTTCAAGGGTGGAGAATTATATTCTTGTCGATTTATAAGCTGATATGTATTTTCCCCGTCTGGATTCTTATCTGCATGCTTTCATCAGCCCCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTATTCGAAGATAGTCTTAGAGCTTCAGGGATTTCTGGGATTGAAATTGGCACAAAGTTGTACGTTTCCAACTTGGATTATGGGGTGTCCAAAGAAGATATAAGGGTACAACTCAAGCCATATATATTTGACTAAAGATGCTTTCTCTTCATTTTTTTTGATTAATATTCACTTGGAACCCGACGGTGAACTCAGGAGTTATTCTCTGAGATTGGAGACCTGAAAAGATTTGCAATTCATTATGACAAAAATGGTCGTCCAAGTGTAAGTTCCTCCACTGTCTTTGTAAAATTATGCAGTAACGTGTTGCTATTTGGCTCTCTCTGGAATCAAGTATCAATATTGTTTTGGACTGTAGCCACAGCTGTGTGACGTTTGAGTTAGTATTTGCTTTTGGTGAATTCAACTTTATTTGTATGCTGTACTGAATCCTTACTTTAGAAGTTGGATCGACTGGTGGTGCTAAAAAAACTATTATACTGAACTTTTAACTAGAATACATGTAACAACTTCAAGTTAATGAATAATATACACATATATATATATATGCACGTACATATATACATATACCATCATGGGTTGACCTAGAGGTAAAAAGGAAATATAGTCTCACTAAATGGCTAAGAGGTCAAGGGTTCAATCCATTTCCTACGAGTTTACTTGACACCCAAATGTTGTAGGGTTAGGCGGGTTGTCCCGTGAGATTAGTCGAGGTGCACGTAAGTTGGCCCGGACACTCACGGATGTATGTGTGTGTGTATATATTGTATAGATATATATGTGTGTATATATATTACTTGATATATATGTGTGCAAATATATATATATTGCATGTTTTTAAAATAATCTCTATAATGGTTTGATATTTTATTTCATGAATAAAATTACACTACAAAGTAATTAATTATTAGTAATATGTGCAATAGGCTCTGTTTATGAATTAAAGTAGGGATGGAATAGAAGCGATCTTATTGTGAGAAAAAAAGAATGTTGTATTTTTAATCAACTTGTGCCGGCTATGCTCAACGCACTTCATTTTTAAGGAGTTTGAACATAGCTAATCTAATATATTCAGTTCATTTGAATCTAGATATCTCAAAAACTTGTTATTCCAACCCTTCCATTAAGGTTTTCAGGGTTGAGTTTCTTTTCCTCTTCTTTAAGGACTCAACCTATTTGCAAACCAGTACAGTTTATGAGATTGATTGTGGTTTCACATGTGGTGGCATAGTCTCATTCTTTAGTGTGTATCGTTCCTTGACCACGTATTCTCTAATTCTTGCTCCTCTTCATTGTCTTTGCTTATTATTGTTATTTATATTTAGTTTCTCTTAATTTAGCATGAGATTTATAAGAAAATATGATAGTCATTGTATTTCTGTTTTAGATGTGTATATAAAAGTTAGCTCCCTTATCAAGCTTTAGTTGGCTGATAAACTTCCCATTGTTTATTGAAGGGCTCAGCAGAGGTGGTATATACTCGTCGAAGTGATGCATTTGCTGCTTTGAAGCGGTATAACAATGTGTTATTGGATGGGAGGCCAATGAAGATTGAAATGCTTGGTGATAATGCTGAAATGCCAGTTTCTGCACGTATAAACGTTACTGGAGTGAATGGAAGAAGCAGGAGGACAGTTGTTTTAACGTATGTAGTATTCTAGTTACTTCTTCTCTTCCTTTTATCTATTTTCTTAATTAATTTTAACATCTATATTGTTAATGACTGTGTGCTGGGAATAGAAAGTTACTGCACATTATTCTATTTCTTGGTCATTTTTATCTTCCTACTTTTAAGTTGCTTCTTATTCCCTAAAGGGAAACTATCATTTGCCTCCTTCAGAAGTTCTTGGTAGGTGAACTCCCCCTATTTGTCCTTACCTTTTCCAGGGGGAATGGTAGTCAAATGAAACCTAAAATGGAACAAAGGAAACAATCAAACAACCCAATTGCAATATATATCTTGAATAGAAAGGCCTAGCAAACTTCTTAGAGAGAGAACACCATGAGGAATATTTTCAAACTATATGTGATGACTTCTACTGGGACTTGAGACTTCCAAATTCAGTTAATAATAGCAGGGTTAATTTATGTTTGGTTGACAAATTAAATATCAGAGATGTGTCCGTTAATGTTGACCACTTGTTGGAATCCTCTTGCAAAGATAAACTACAACTAATTGGTAGATCTGGTAGATGGCGCTACTCACAAGCTTCATCGTTAGATTTCTCGTGAGAATTTCAAGTCCTAAAGGGGTTGTTTGGGATAAGGAGTGGAATAGTGGGGAGTAAGGAGTTACATGAACTCCTAGACTTACGGTGTAAGGAGTTGATAAGATATAAAATTGATTTTTTTTATAGTGGGACCCATAACTCTTTGGGCCAAACAAATGGTGGAATTCACACTCTTACTTCCCTACTCCTACTTTACAACTCCTTGGGCCAAACACACTCTAACTAATAACCTCTGCTTGACATTGTTAATCCTCTTGAGTTCCCCACCCTAGAGTGGGTGAGTGAATTTTATTGGTGCATATTCTTAGCCATTGGTCTTCCCATAACCATATCTCGCTTCCCTTACCCACCTTGCGACTGTGCCATTTTTCCACAAGGAGGTAGCACTTAGGGAGTGTTTGGGGTAAGAAGTGGAATAGTGAAAGTAAGGAGTTATGAAATCTAGGGAGTTGTGAACACTTGGGGCCCATAATATAAGGAATTTATAAATTATAATTATAAAATTGGTGTTTTTTAATAGTGGGACCCACCTAGCTGTGTTTTCCATGGCATGTATGAGTTATTTTCATGTTGCAAGAACTGTTCCATTTGTGGGTTCCGACATTTATTAAAAAACAACCACATGACCTACCCGTGTAAATTGTGCATGGAATGACGATGGATTTTTTTAATGGGAACAAACATCTCATTATCACTATGGGTTGACCTAGTGATCAATAAGGGCCCATGTAAATGATAAAGGGTCCAATAATAAAGGGTCTAGGGGTAATAGGTTGTAGACATGGTGGTCATATACGTAGGATTTAATATCCTGCAAGTTATTTCGATAATCAAAATGTAGTAGGACGCGGTGAGTAAGCTGGCTTTGACAGTCACATATATAAAATGAAAAAAAAGGAACAAATCTTTCATTGGTAGATGAAAATAAAGAAAATAGGCTAATGGAATGATTGTAAGTGCAGCCAGGAGATTCAAGCTAGGTCACCTATTCATCCATTGCCAGTATGCTTGTTATTTTTGGAATGATTTGAGAAATTCTTTCAACTGGCCGGTGGTCCTTCCAAATGACCCCAACATGCTCGATGCCCTTCTTTTGGGTCATCCCTTCAAATTAGAGAAGGATCTTTTGTGGAAGAATCTATTTCGTGCCTTTCTTTGGTCTATATGGAGTGAAAGAAATCGTCGAACCTTCAAATTTAAGGAGACTACATGTAGACAATTTTTTGATAATGTCCTCTTTATTCCTTTTTCTTGGTGTAAATTGAATTATCTTGTCTCCTTTTATACTCTTTCCTCTCTTTTGTCCAATTTAACTCCTTTGGATTGGGGATATCTCCTTTTCTCCTTTTGTAATTTCACTCATCAATAAAATTATTTCTTTAGAAAAACAATAAAGAAAATAGCTTTGGGAAGATGAACCCTCCAAACAGTCGTAAATTTTAAAAGAGGTAAACTTTTCATTGATAGATAGAACGAAAAAAAAGTTGAAAAATACAAGCTTCTGAAGGGAGTGAAAAGAACAGCATTGAAACTAATGAAGTACAAGTGTCCAAAAATTACTGTTGCTGAAATTAAACATCGAAGAATAAAGCACCCAAAGGAGAAGAAAACAAGCAAAGTAATCCAAGAAGCAAGGCCTTAGATTTGGAAAGCCATGGAAGCTAAAATACTATCCCATCCAAATGCAAAACCAGCATTATCACCCATTAACCAAAATAATCTTAGCAACAAGAAAAGTGGAATTTTCCTCTTGAAGAGGGATAAAAAAGCCTTCTAGAAGAATTTCTTTACAATGAACTTTGTCTTAGCATCATTTTGTTAGATACTCTTGTGCTGCTCATGTTTGTATTTTAAATTTCTTATTTGCTTTGTTTCATTATATTTTTAAACATTAGACTCGTTTCACTATATCAATGAAAAGTTCTTTTTCCTTCTAAAAAAGGGGTGGACCTCTTTCGATAACTCCCATAATAACCCAACATGTTTTGAGGATGTATCTAGTTTGAACATGAGTTGTCAAAAGTTGGAATTTTTTGGGGTTGACCTTGATCCATATGTTCACTTCATTAGTGGTGAATTTGGACTGCAAGGTTGGTGATTGGCCAGCCACCTATGACTTATCTAGGCTTGCCTCCAAATGCTGAGCATAAAACTTCATCATTTTTTTTGGTTTCCATCATTGAGAAAATTTAGGAAAGGCTCTACTCATACATCTCTAATGGAGACCGATAGATTCTCATTCAAGCATCATTGGCCAACCTTCCCATCTACTATTTATCCCTTTTTCCCATCCACTCCCTCAGCATCCATCACATTCTTTTGGAACTTTTTGTGGATGGGCAACAAATAAAAGGGTTGTTCTTAATCTTAGATGGGAAGAAGTAAGTTAACTTTAGTAGGAGGTTTACTGGATTGTTGGAATAATATATCCTTGTTGGCTAAATGGATTTGGTGACTTCATAAAGAGAAATCCACCACCCTGTGGAAGAAAGTTATTGTTTCACTCATCACTTGCAAAGTTGCTAATGTTATTGGTACTCCTGATTTGTGGATTGGTATTGAGGCTCTGAAATAGAGCTTTCCCTCTTTGTTTGCTATTGCACGGGATTGGTTATTTTGTGGCTGACATGTGTAACAAATCTTTGGCTTCTTGGAGCTTCTGGTGTGGGAGATATTTGACTCAAGGAGAAACTGGGATTGGGCCAGCCTTCATATGCTCTTGTCGGTGTGAATGTCAATGTATCCCTGACATTTGATGCTGGAATTTAGAGATGGATGGGTTTCTTTTTTTCCTCATCAAAATCTTTCGTTAGCTTCGATGGAACAATTGGCTGTAAAGATCTATCTAAGCATTTAGAAAGAATTATGCCGCAAAAAGGTGAAGTTCTTTATAGGAGAGTCGTCAAGCCAGTCATGTCTTAATTCTTACAACCACCTTCAAAGGAAATCTATTTGGATATCCATGTCTCCTAACTGCGGCATTTTGTGCAAAGTCGATGGAGATTTGCATAGTCATCTCTTGTTTTGGTGCAAGCAAGCCGAAATCTTTGGGACTTCATTCGTCAAGAGTTTGGGTGGCAGATCACCTTTCCTCTTGATGTTAGGGACATTCTCCCTCTTGTTTTCAGCAGTGTTTTCAAAGTGTAAAACACTAAGTGCGAAGGCAAGAGGCGAAAAAAAGGCGATGCCTGAATGAAGCGAGGCACAATGAATAAATAAATAATTAAATAATATATGCAGAACATAAGGATATATATGTATATATGTCAAAACTTCAAAGATTAATTCTAATAAATGGTAAAATAATCCAAATGTTAAAATATTAAATAATAATCTAATCAATAAAAATGAACAAAATCCTACCAATAAAAATGAACAAAATTAATAATAAGATAGAATACAAATTAAACTAAACTTTTAAGAATATATAATATACTAGTCTAATATGTATACTATAATATAATCATTATTTCATTATTTAAAAAACTACCAAAGAACCCACTGATCACAAAACCTATCATTGACTACAAAACCCACCAACCCACCGACAGAATATTAACAATTTAACATTTAAACCATTTAATCAGTGATTCAATGGTTTAAAAAAAGTGGAAAGAAGAAAATTGAAATTTATCGGTGGAGGTGACCACAAAGCACAAACCCAACCGACAAGAAGAATATAAAATAGGAGAGGAACATTAAGTTTATTCACTTAGATTTCAAATCAGAACGAGATGCAAAATAGAAGAGGAATATTGCGGAAGAAGACGTTGAAAGAAGAACTGTCACTCGTTTGTGGAAGAAGATTTGAAGAAGAATTGTCGCTCTGTTCTGAAAGACCAACATTGAAGAAGAGTCTATCGGAAGAAGCCTTGAAGAAGAAGAAATTGAAGGGGAAAGATGCTGAATTTAAAATGCCTAATAAAATCGAATCAAATATGGAAAATCTTCACCAAGGCTCTTTCTTCATGGCTTCGGATTGAATTCCTTGGGTATCAAGCAAATTAAAAAAAAAATAATGAAACACAGTACTTCGCTGGGTGCACGCCTTCGTCAAATAGCCAAGGTGCATCAAGGCACTGTGAGGTGCCACCAATGTGAGCGCCCCTTTGAAGTTGGTTGCCCAGAGATTGCAAGAGGCAGAAATGCCTCATATCGCATCGCCCAAGGTGAGCGCTTGGTTGTGTCTTGAAAGCATTGGTTTTCATTGTAGACCTTTTCAAGGAGAGGAAGATTCTTTGTCTGAACTTCATTCGGGATTTCTTGTGGTCTTACTGGTTGGAATGCAACTCTAGTATCTTTTTAGATAAGGAACAAGACCTCTAATCTTATTTAACATGGTCTTACTGGTTGGAATGCAACTCTAGTATCTTTTTAGATAAGGAACAAGACCTCTAATCTTATTTAACATCTATTAGATACGTCTCCTTTAATTGGTGTAAATTGAGCTCACCTTTCTAAATTATAGTTTATCAAATCTCATGCCCAATGGGAGATGTTTTTTTTTTTGTAATCCACTGGATAAGATCTCACCTTTTGTAAATTCATTTAGTCAACATAAGTTACTGTTCCCAATAAAATGAAAACAAACATGTTTTGAAATACCCTTAGAAGAACTTAAATCAACCGAAATAGGGGGAAGAGCAGCCATCTTTGAGTTGTTTTCTTCGTCTTTAGGTAATAGGGAAAGGCTTCATCGAGATCACCTTGGAGAAAATACTAATCTTTGACAGAAAACAGCATTTGTGAGTATTTCAAATAGTCCTCATTAGAAACAAAATGGTATAGTAACTTTTGAGTTTTGACCTATAGGTTCTTATACTATGATCTCTACTAATCTCAAACTGGAAGATTCTGATGGGCTGGTTATGCCATTTTAATTTAATGTTTAATGCTTTGAAGATATGTAATAAATGTTCTTTTCATCTAAATAGTATTTTCAGTTCAATCGTATGTATGTAAAATCTCTAAGAAGTTCCATCGTGAGTATGCTGCTTCCAATGTAATGTGACTATACTAGATGCACAAATTCTTCCAACTGGCCTAAACTAGCATTTGCTGATTGCAGTCAAGTTACTTCTTAAAATACAACCTCAAGATTCGTTTTAGGTCTGAAAACGCATGCTTTCTCGCTTTTAACATGGAGTAATATTACGTATTTTCGATTCTTTGATAAATTTTGTTGTAGTCTGTTAATGGTTTCTTTGATAAATTTACGTATTATATTCGATTTTATCAAAAAAAGAAAAAAAAAGGAGGAAGAAAAGAGAAGGAAAAAATTTACGTATTTTCGATTCTTTGATAAATTTTGTTGTAGTCTGTTAATGGTTTCTTATCTTCCTATGTCCTTGGCTGCGGTGTCTGAAACTGACCCCCTTGCCTTTTTGTGTTGTCCTTTAAAAGTCGTATTTTTAACTTTTTTGATGAAAAGAAATATTATCTGCTACAATGTTTAGTAATATTAATATTTGTTGGGTATATGCAGGCCTGAATCTGGTCGTACTGCTAGCTCCAACGTGGTCAACCCTTTTCCTGGGTAAGTTCTGACTGGACATTGCTTTCAGCATGAAATTCTTATATTCAGTAGTGGAGTAGCTAGGTTTTATTATTATTATTATCATTACTATGTTATGGGATTGTTTTACTGCCTGCTAGTTGGATTGGTTTTGAAGTCAGTTGTTCTTGGTTACTCGTATCCCTGATTTTCTTAGGGGCGTTAGAACTGAGAGTTATTTACTTATTTCTTTTCTACCTGTTTGGAAGTGTGGAAGACAGGCTAATGAATTATTTCCTTAATACAGTTTTTAGAACAAAAAAGAAAAAGCGGACAACAGATGTTAGTAATAGTAGTGCAATGCTTGTGTGCGTGTGTTTTAAAATTTTTATAAATCAAACTGTCTAAATTCGCCTAAGTTATTTTTGAAAATTGATATGGAGAAAGAAATGAAAACACAAGCAAAACAATATTTTTCTTGTAGCTTTTATGAGGTTAAATTACAACTTTATAGTTTGTATCTATTTAGTTCTTGAGCTTTCAAAAATATCTAATAGATCTTCAAACTTACAATTTTGTATTCCATAGATCTCTAAACTTCAAAAAGTGTCTAATAAGTCTTTTATTATTATTTTTCTTTTTCAATGAGAAACAAGACTATATATATAAATGAAAAGAGAACATAACCCAAAGGCTTATGGGAGAGGTCCCGAAGCCTAATTTGAGGAATTGACAAAAGATGAACGAAGCGATATTATGTGTACGATGGCTCAGCTTCCTTTCAAGTTTTAAAACTGTACATCGCGAGTTGGAAATGGAGTAAAGATGAACAAACTTTGCTTGAATTGGTAAAACTAGTTTTTGTTGCCGTGGTTTTATTAAAGTTCTTGGATTTTGTATAGTCCAAGCCATCGTGGAGGGCTGAGGAATGGCCGTGGCCGTGGGCGAGGTGGCTGGAATCGTGGACAAGGTGTAGGAGGAGGTGGAGGCGGCCGTGGCCGAGGGCGTGGTCGTGGCCGTGGCCAGGGAAGAAAGAAACCTGTGGAGAAGTCCTCAGATGAACTTGACAAAGAGCTTGAAAACTACCATGCAGAAGCCATGCAAACCTGA

mRNA sequence

GGATAATCTTCAGGACTTCTTTTCTATAGTTTCTTGTAATCTGTTTCCTCCTACCACACCAATGGCTACTCCTTTGGATATGTCATTAGAGGATGTGATAAAGAAGAGTAACCGTGAGAAGCTTAGAGCACGAGGTAGGGCCCGTCGTGGTCGTGGAGCAGGTGGGTCTTTTAATGGTGGAAGAGGAGTAGTGGTAGGATCAGTTCGCAGGGGTCCTCTCGGCATAAATGCACGGGCATCTGCTTACTCAATTCGCAAGCCCCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTATTCGAAGATAGTCTTAGAGCTTCAGGGATTTCTGGGATTGAAATTGGCACAAAGTTGTACGTTTCCAACTTGGATTATGGGGTGTCCAAAGAAGATATAAGGGAGTTATTCTCTGAGATTGGAGACCTGAAAAGATTTGCAATTCATTATGACAAAAATGGTCGTCCAAGTGGCTCAGCAGAGGTGGTATATACTCGTCGAAGTGATGCATTTGCTGCTTTGAAGCGGTATAACAATGTGTTATTGGATGGGAGGCCAATGAAGATTGAAATGCTTGGTGATAATGCTGAAATGCCAGTTTCTGCACGTATAAACGTTACTGGAGTGAATGGAAGAAGCAGGAGGACAGTTGTTTTAACGCCTGAATCTGGTCGTACTGCTAGCTCCAACGTGGTCAACCCTTTTCCTGGTCCAAGCCATCGTGGAGGGCTGAGGAATGGCCGTGGCCGTGGGCGAGGTGGCTGGAATCGTGGACAAGGTGTAGGAGGAGGTGGAGGCGGCCGTGGCCGAGGGCGTGGTCGTGGCCGTGGCCAGGGAAGAAAGAAACCTGTGGAGAAGTCCTCAGATGAACTTGACAAAGAGCTTGAAAACTACCATGCAGAAGCCATGCAAACCTGA

Coding sequence (CDS)

GGATAATCTTCAGGACTTCTTTTCTATAGTTTCTTGTAATCTGTTTCCTCCTACCACACCAATGGCTACTCCTTTGGATATGTCATTAGAGGATGTGATAAAGAAGAGTAACCGTGAGAAGCTTAGAGCACGAGGTAGGGCCCGTCGTGGTCGTGGAGCAGGTGGGTCTTTTAATGGTGGAAGAGGAGTAGTGGTAGGATCAGTTCGCAGGGGTCCTCTCGGCATAAATGCACGGGCATCTGCTTACTCAATTCGCAAGCCCCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTATTCGAAGATAGTCTTAGAGCTTCAGGGATTTCTGGGATTGAAATTGGCACAAAGTTGTACGTTTCCAACTTGGATTATGGGGTGTCCAAAGAAGATATAAGGGAGTTATTCTCTGAGATTGGAGACCTGAAAAGATTTGCAATTCATTATGACAAAAATGGTCGTCCAAGTGGCTCAGCAGAGGTGGTATATACTCGTCGAAGTGATGCATTTGCTGCTTTGAAGCGGTATAACAATGTGTTATTGGATGGGAGGCCAATGAAGATTGAAATGCTTGGTGATAATGCTGAAATGCCAGTTTCTGCACGTATAAACGTTACTGGAGTGAATGGAAGAAGCAGGAGGACAGTTGTTTTAACGCCTGAATCTGGTCGTACTGCTAGCTCCAACGTGGTCAACCCTTTTCCTGGTCCAAGCCATCGTGGAGGGCTGAGGAATGGCCGTGGCCGTGGGCGAGGTGGCTGGAATCGTGGACAAGGTGTAGGAGGAGGTGGAGGCGGCCGTGGCCGAGGGCGTGGTCGTGGCCGTGGCCAGGGAAGAAAGAAACCTGTGGAGAAGTCCTCAGATGAACTTGACAAAGAGCTTGAAAACTACCATGCAGAAGCCATGCAAACCTGA

Protein sequence

DNLQDFFSIVSCNLFPPTTPMATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARASAYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPVSARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNRGQGVGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT

Homology

[Close]

BLAST of Bhi01G001493 vs. TAIR 10
Match: AT5G37720.2 (ALWAYS EARLY 4 )

HSP 1 Score: 273.1 bits (697), Expect = 2.7e-73
Identity = 165/291 (56.70%), Postives = 213/291 (73.20%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRAR-RGRGAGGSFNGGRGVVVGSVRRGPLGINARA 80
           M+  L+M+L++++K+    +   RG +R RGRG GG   GGRG   G  RRGPL +NAR 
Sbjct: 1   MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGG---GGRG--AGPARRGPLAVNARP 60

Query: 81  SAYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSE 140
           S+++I KP RR++++ WQ  LFED LRA+G SG+E+GT+L+V+NLD GV+ EDIRELFSE
Sbjct: 61  SSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 120

Query: 141 IGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDN--AE 200
           IG+++R+AIHYDKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDGRPM++E+LG N  +E
Sbjct: 121 IGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSE 180

Query: 201 MPVSAR--INVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRG-RGG 260
            P+S R  +NVTG+NGR +RTVV+    GR        P P  S R  + N +G G RGG
Sbjct: 181 APLSGRVNVNVTGLNGRLKRTVVIQVRGGRGGR----GPAPTVSRRLPIHNQQGGGMRGG 240

Query: 261 WNRGQGVGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
               +  G G GGRGRG GRG G   KKPVEKS+ +LDK+LE+YHA+AM T
Sbjct: 241 RGGFRARGRGNGGRGRGGGRGNG---KKPVEKSAADLDKDLESYHADAMNT 279

[Close]

BLAST of Bhi01G001493 vs. TAIR 10
Match: AT5G37720.1 (ALWAYS EARLY 4 )

HSP 1 Score: 268.5 bits (685), Expect = 6.7e-72
Identity = 164/295 (55.59%), Postives = 212/295 (71.86%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRAR-RGRGAGGSFNGGRGVVVGSVRRGPLGINARA 80
           M+  L+M+L++++K+    +   RG +R RGRG GG   GGRG   G  RRGPL +NAR 
Sbjct: 1   MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGG---GGRG--AGPARRGPLAVNARP 60

Query: 81  SAYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSE 140
           S+++I KP RR++++ WQ  LFED LRA+G SG+E+GT+L+V+NLD GV+ EDIRELFSE
Sbjct: 61  SSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 120

Query: 141 IGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDN--AE 200
           IG+++R+AIHYDKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDGRPM++E+LG N  +E
Sbjct: 121 IGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSE 180

Query: 201 MPVSAR--INVTGVNGRSRRTVVLTPESGR----TASSNVVNPFPGPSHRGGLRNGRGRG 260
            P+S R  +NVTG+NGR +RTVV+    G             P P  S R  + N +G G
Sbjct: 181 APLSGRVNVNVTGLNGRLKRTVVIQQGGGGRGRVRGGRGGRGPAPTVSRRLPIHNQQGGG 240

Query: 261 -RGGWNRGQGVGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
            RGG    +  G G GGRGRG GRG G   KKPVEKS+ +LDK+LE+YHA+AM T
Sbjct: 241 MRGGRGGFRARGRGNGGRGRGGGRGNG---KKPVEKSAADLDKDLESYHADAMNT 287

[Close]

BLAST of Bhi01G001493 vs. TAIR 10
Match: AT1G66260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-66
Identity = 165/312 (52.88%), Postives = 213/312 (68.27%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRA-----RGRARR-GRGAGGS---FNGGRGVVVGSVRRG 80
           M+  L+M+L++++KKS  E+  A     +G +R+ GRG GG      GGRG   G VRRG
Sbjct: 1   MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRG--GGPVRRG 60

Query: 81  PLGINAR-ASAYSIRKPPRRMKNVQW--QHDLFEDSLRASGISGIEIGTKLYVSNLDYGV 140
           PL +N R +S++SI K  RR +++ W  Q+DL+E++LRA G+SG+E+GT +Y++NLD GV
Sbjct: 61  PLAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGV 120

Query: 141 SKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMK 200
           + EDIREL++EIG+LKR+AIHYDKNGRPSGSAEVVY RRSDA  A+++YNNVLLDGRPMK
Sbjct: 121 TNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMK 180

Query: 201 IEMLGDNAE-MPVSARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNG 260
           +E+LG N E  PV+AR+NVTG+NGR +R+V                 F G   RGG R G
Sbjct: 181 LEILGGNTESAPVAARVNVTGLNGRMKRSV-----------------FIGQGVRGG-RVG 240

Query: 261 RGRGRGGWNR---------GQGVGGGGGGRGRGRGRGRGQGR-------KKPVEKSSDEL 304
           RGRG G   R         G    G GG RGRGRG G G+G        KKPVEKS+ +L
Sbjct: 241 RGRGSGPSGRRLPLQQNQQGGVTAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADL 292

[Close]

BLAST of Bhi01G001493 vs. TAIR 10
Match: AT1G66260.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-66
Identity = 165/312 (52.88%), Postives = 213/312 (68.27%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRA-----RGRARR-GRGAGGS---FNGGRGVVVGSVRRG 80
           M+  L+M+L++++KKS  E+  A     +G +R+ GRG GG      GGRG   G VRRG
Sbjct: 1   MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRG--GGPVRRG 60

Query: 81  PLGINAR-ASAYSIRKPPRRMKNVQW--QHDLFEDSLRASGISGIEIGTKLYVSNLDYGV 140
           PL +N R +S++SI K  RR +++ W  Q+DL+E++LRA G+SG+E+GT +Y++NLD GV
Sbjct: 61  PLAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGV 120

Query: 141 SKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMK 200
           + EDIREL++EIG+LKR+AIHYDKNGRPSGSAEVVY RRSDA  A+++YNNVLLDGRPMK
Sbjct: 121 TNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMK 180

Query: 201 IEMLGDNAE-MPVSARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNG 260
           +E+LG N E  PV+AR+NVTG+NGR +R+V                 F G   RGG R G
Sbjct: 181 LEILGGNTESAPVAARVNVTGLNGRMKRSV-----------------FIGQGVRGG-RVG 240

Query: 261 RGRGRGGWNR---------GQGVGGGGGGRGRGRGRGRGQGR-------KKPVEKSSDEL 304
           RGRG G   R         G    G GG RGRGRG G G+G        KKPVEKS+ +L
Sbjct: 241 RGRGSGPSGRRLPLQQNQQGGVTAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADL 292

[Close]

BLAST of Bhi01G001493 vs. TAIR 10
Match: AT5G02530.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 180.3 bits (456), Expect = 2.4e-45
Identity = 139/304 (45.72%), Postives = 179/304 (58.88%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           M+  LDMSL+D+I KSNR+   +RGR   G G      GG G   G  RR    + AR +
Sbjct: 1   MSGGLDMSLDDII-KSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVGARTA 60

Query: 81  AYSIRKPPRRMKNVQWQHDLF--EDSLRAS----------GISGIEIGTKLYVSNLDYGV 140
            YS     ++  +  WQ+D+F  + S+ A+          G S IE GTKLY+SNLDYGV
Sbjct: 61  PYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGV 120

Query: 141 SKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMK 200
           S EDI+ELFSE+GDLKR+ IHYD++GR  G+AEVV++RR DA AA+KRYNNV LDG+ MK
Sbjct: 121 SNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMK 180

Query: 201 IEMLGDNAEMPVSARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGR 260
           IE++G N   P    +    +           P +G   + N    F G  +     N R
Sbjct: 181 IEIVGTNLSAPALPILATAQIP---------FPTNGILGNFN--ENFNGNFNGNFNGNFR 240

Query: 261 GRGRGGW---NRGQGVGGGG--GGRG-RGRGRGRGQ-GRKKPVEKSSDELDKELENYHAE 306
           GRGRGG+    RG G GGG   GGRG RGRG GRG  GR +    S+++LD EL+ YH E
Sbjct: 241 GRGRGGFMGRPRGGGFGGGNFRGGRGARGRG-GRGSGGRGRDENVSAEDLDAELDKYHKE 291

[Close]

BLAST of Bhi01G001493 vs. ExPASy Swiss-Prot
Match: Q6NQ72 (THO complex subunit 4D OS=Arabidopsis thaliana OX=3702 GN=ALY4 PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.5e-71
Identity = 164/295 (55.59%), Postives = 212/295 (71.86%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRAR-RGRGAGGSFNGGRGVVVGSVRRGPLGINARA 80
           M+  L+M+L++++K+    +   RG +R RGRG GG   GGRG   G  RRGPL +NAR 
Sbjct: 1   MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGG---GGRG--AGPARRGPLAVNARP 60

Query: 81  SAYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSE 140
           S+++I KP RR++++ WQ  LFED LRA+G SG+E+GT+L+V+NLD GV+ EDIRELFSE
Sbjct: 61  SSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 120

Query: 141 IGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDN--AE 200
           IG+++R+AIHYDKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDGRPM++E+LG N  +E
Sbjct: 121 IGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSE 180

Query: 201 MPVSAR--INVTGVNGRSRRTVVLTPESGR----TASSNVVNPFPGPSHRGGLRNGRGRG 260
            P+S R  +NVTG+NGR +RTVV+    G             P P  S R  + N +G G
Sbjct: 181 APLSGRVNVNVTGLNGRLKRTVVIQQGGGGRGRVRGGRGGRGPAPTVSRRLPIHNQQGGG 240

Query: 261 -RGGWNRGQGVGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
            RGG    +  G G GGRGRG GRG G   KKPVEKS+ +LDK+LE+YHA+AM T
Sbjct: 241 MRGGRGGFRARGRGNGGRGRGGGRGNG---KKPVEKSAADLDKDLESYHADAMNT 287

[Close]

BLAST of Bhi01G001493 vs. ExPASy Swiss-Prot
Match: Q94EH8 (THO complex subunit 4C OS=Arabidopsis thaliana OX=3702 GN=ALY3 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-65
Identity = 165/312 (52.88%), Postives = 213/312 (68.27%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRA-----RGRARR-GRGAGGS---FNGGRGVVVGSVRRG 80
           M+  L+M+L++++KKS  E+  A     +G +R+ GRG GG      GGRG   G VRRG
Sbjct: 1   MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRG--GGPVRRG 60

Query: 81  PLGINAR-ASAYSIRKPPRRMKNVQW--QHDLFEDSLRASGISGIEIGTKLYVSNLDYGV 140
           PL +N R +S++SI K  RR +++ W  Q+DL+E++LRA G+SG+E+GT +Y++NLD GV
Sbjct: 61  PLAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGV 120

Query: 141 SKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMK 200
           + EDIREL++EIG+LKR+AIHYDKNGRPSGSAEVVY RRSDA  A+++YNNVLLDGRPMK
Sbjct: 121 TNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMK 180

Query: 201 IEMLGDNAE-MPVSARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNG 260
           +E+LG N E  PV+AR+NVTG+NGR +R+V                 F G   RGG R G
Sbjct: 181 LEILGGNTESAPVAARVNVTGLNGRMKRSV-----------------FIGQGVRGG-RVG 240

Query: 261 RGRGRGGWNR---------GQGVGGGGGGRGRGRGRGRGQGR-------KKPVEKSSDEL 304
           RGRG G   R         G    G GG RGRGRG G G+G        KKPVEKS+ +L
Sbjct: 241 RGRGSGPSGRRLPLQQNQQGGVTAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADL 292

[Close]

BLAST of Bhi01G001493 vs. ExPASy Swiss-Prot
Match: Q8L719 (THO complex subunit 4B OS=Arabidopsis thaliana OX=3702 GN=ALY2 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.4e-44
Identity = 139/304 (45.72%), Postives = 179/304 (58.88%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           M+  LDMSL+D+I KSNR+   +RGR   G G      GG G   G  RR    + AR +
Sbjct: 1   MSGGLDMSLDDII-KSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVGARTA 60

Query: 81  AYSIRKPPRRMKNVQWQHDLF--EDSLRAS----------GISGIEIGTKLYVSNLDYGV 140
            YS     ++  +  WQ+D+F  + S+ A+          G S IE GTKLY+SNLDYGV
Sbjct: 61  PYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGV 120

Query: 141 SKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMK 200
           S EDI+ELFSE+GDLKR+ IHYD++GR  G+AEVV++RR DA AA+KRYNNV LDG+ MK
Sbjct: 121 SNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMK 180

Query: 201 IEMLGDNAEMPVSARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGR 260
           IE++G N   P    +    +           P +G   + N    F G  +     N R
Sbjct: 181 IEIVGTNLSAPALPILATAQIP---------FPTNGILGNFN--ENFNGNFNGNFNGNFR 240

Query: 261 GRGRGGW---NRGQGVGGGG--GGRG-RGRGRGRGQ-GRKKPVEKSSDELDKELENYHAE 306
           GRGRGG+    RG G GGG   GGRG RGRG GRG  GR +    S+++LD EL+ YH E
Sbjct: 241 GRGRGGFMGRPRGGGFGGGNFRGGRGARGRG-GRGSGGRGRDENVSAEDLDAELDKYHKE 291

[Close]

BLAST of Bhi01G001493 vs. ExPASy Swiss-Prot
Match: Q8L773 (THO complex subunit 4A OS=Arabidopsis thaliana OX=3702 GN=ALY1 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 7.8e-41
Identity = 124/291 (42.61%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           M+T LDMSL+D+I K+     ++RG A   RG G     G      + R  P   + R++
Sbjct: 1   MSTGLDMSLDDMIAKNR----KSRGGAGPARGTGSGSGPG-----PTRRNNPNRKSTRSA 60

Query: 81  AYSIRKPPRRMKNVQWQHDLF----EDSLRASGISGIEIGTKLYVSNLDYGVSKEDIREL 140
            Y   K P       W HD+F    ED       +GIE GTKLY+SNLDYGV  EDI+EL
Sbjct: 61  PYQSAKAPES----TWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKEL 120

Query: 141 FSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNA 200
           F+E+G+LKR+ +H+D++GR  G+AEVVY+RR DA AA+K+YN+V LDG+PMKIE++G N 
Sbjct: 121 FAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNL 180

Query: 201 EMPVSARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWN 260
           +   +                     SGR A+ N      G   RG      G+GRGG  
Sbjct: 181 QTAAA--------------------PSGRPANGN----SNGAPWRG------GQGRGGQQ 240

Query: 261 RGQGVGGGG-GGRGRGRGRGRGQGRKKPVEK-SSDELDKELENYHAEAMQT 306
           RG G GGGG GG GRGR  G+G     P EK S+++LD +L+ YH+  M+T
Sbjct: 241 RGGGRGGGGRGGGGRGRRPGKG-----PAEKISAEDLDADLDKYHSGDMET 243

[Close]

BLAST of Bhi01G001493 vs. ExPASy Swiss-Prot
Match: O08583 (THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3)

HSP 1 Score: 141.0 bits (354), Expect = 2.3e-32
Identity = 121/296 (40.88%), Postives = 161/296 (54.39%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRR-----GPLGI 80
           MA  +DMSL+D+I K NR +   RG   RGRG  GS  GGRG  V +  R     GP+  
Sbjct: 1   MADKMDMSLDDII-KLNRSQRGGRG-GGRGRGRAGS-QGGRGGAVQAAARVNRGGGPMRN 60

Query: 81  N---ARASAYSIRKPP---RRMKNV--QWQHDLFEDSLRASGISGIEIGTKLYVSNLDYG 140
               AR +A   R  P    R K +  +WQHDLF+      G +G+E G KL VSNLD+G
Sbjct: 61  RPAIARGAAGGGRNRPAPYSRPKQLPDKWQHDLFDSGF--GGGAGVETGGKLLVSNLDFG 120

Query: 141 VSKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPM 200
           VS  DI+ELF+E G LK+ A+HYD++GR  G+A+V + R++DA  A+K+YN V LDGRPM
Sbjct: 121 VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPM 180

Query: 201 KIEMLGDNAEMPVSARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNG 260
            I++        V+++I+                   R A S          +RGG+   
Sbjct: 181 NIQL--------VTSQIDT----------------QRRPAQS---------INRGGMTRN 240

Query: 261 RGRGRGGWNRGQGVGGGG---GGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHA 301
           RG G        G GGGG   G RG  RGRGRG GR    + S++ELD +L+ Y+A
Sbjct: 241 RGSG--------GFGGGGTRRGTRGGSRGRGRGTGRNSKQQLSAEELDAQLDAYNA 250

[Close]

BLAST of Bhi01G001493 vs. NCBI nr
Match: XP_038896761.1 (THO complex subunit 4D-like [Benincasa hispida])

HSP 1 Score: 541.6 bits (1394), Expect = 4.4e-150
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS
Sbjct: 1   MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI
Sbjct: 61  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 180

Query: 201 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNRGQG 260
           SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNRGQG
Sbjct: 181 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNRGQG 240

Query: 261 VGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
           VGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT
Sbjct: 241 VGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 285

[Close]

BLAST of Bhi01G001493 vs. NCBI nr
Match: XP_008457020.1 (PREDICTED: THO complex subunit 4D [Cucumis melo])

HSP 1 Score: 511.9 bits (1317), Expect = 3.7e-141
Identity = 267/285 (93.68%), Postives = 275/285 (96.49%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           M TPLDMSLEDVIKK+NREKLRARGRARRGRGAGGSFNGGRGVV+GSVRRGPLGINARAS
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINARAS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           AYSIRKPP RMKNVQWQHDLFEDSLRASGISGI+IGTKLYVSNLDYGV+KEDIRELFSEI
Sbjct: 61  AYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIEMLGDNAEMPV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEMPV 180

Query: 201 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNRGQG 260
           SARINVTG NGR+RRTVVLTPESGR A+ NVVNPFPGPSHRGGLRN RGRGRG W RG G
Sbjct: 181 SARINVTGTNGRNRRTVVLTPESGRNATFNVVNPFPGPSHRGGLRNARGRGRGAWTRGVG 240

Query: 261 VGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
           +GG GGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT
Sbjct: 241 LGGSGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 285

[Close]

BLAST of Bhi01G001493 vs. NCBI nr
Match: XP_004145851.1 (THO complex subunit 4D [Cucumis sativus] >KAE8650594.1 hypothetical protein Csa_011773 [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 1.0e-138
Identity = 265/286 (92.66%), Postives = 276/286 (96.50%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           M TPLDMSLEDVIKK+NREKLRARGRARRGRGAGGSFNGGRGVV+GSVRRGPLGINARAS
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINARAS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           AYSIRKPP RMKNVQWQHDLFEDSLRASGISGI+IGTKLYVSNLDYGV+KEDI+ELFSEI
Sbjct: 61  AYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GD+KRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIEMLGDNAEMPV
Sbjct: 121 GDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEMPV 180

Query: 201 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNRGQG 260
           SARINVTG NGR+RRTVVLT ESGR A+SNVVN FPGPSHRGGLRN RGRGRG W+RG G
Sbjct: 181 SARINVTGTNGRNRRTVVLTSESGRNATSNVVNSFPGPSHRGGLRNARGRGRGAWSRGVG 240

Query: 261 VGGG-GGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
           +GGG GGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT
Sbjct: 241 LGGGSGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 286

[Close]

BLAST of Bhi01G001493 vs. NCBI nr
Match: XP_023527122.1 (THO complex subunit 4D [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.0 bits (1260), Expect = 1.5e-134
Identity = 266/295 (90.17%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           MATPLDMSLEDVIKK+NREKLRARGRARRGRGAGGS+NGGR VV+GSVRRGPLGINAR S
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           A+SI KPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGV+KEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 201 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRN--GRGRGRGGWNRG 260
           SARINVTGVNGRSRRTVVLT ESGRT SSN VNPFPGPSHRGGLR+  GRGRGRGGW+RG
Sbjct: 181 SARINVTGVNGRSRRTVVLTSESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRGRGGWSRG 240

Query: 261 QGVGG----GGGGRGRGR----GRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
            G GG    GGGGRGRGR    GRGRGQGRKKPVEKSS ELDKELENYHAEAMQT
Sbjct: 241 LGGGGGRGLGGGGRGRGRGSGSGRGRGQGRKKPVEKSSAELDKELENYHAEAMQT 295

[Close]

BLAST of Bhi01G001493 vs. NCBI nr
Match: XP_022982649.1 (THO complex subunit 4D-like [Cucurbita maxima] >XP_022982650.1 THO complex subunit 4D-like [Cucurbita maxima] >XP_022982651.1 THO complex subunit 4D-like [Cucurbita maxima])

HSP 1 Score: 488.8 bits (1257), Expect = 3.4e-134
Identity = 266/305 (87.21%), Postives = 277/305 (90.82%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           MATPLDMSLEDVIKK+NREKLRARGRARRGRGAGGS+NGGR VV+GSVRRGPLGINAR S
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           A+SI KPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGV+KEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 201 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNR--- 260
           SARINVTGVNGRSRRTVVLT ESGRT SSN VNPFPGPSHRGGLR+GRGRGRGGW+R   
Sbjct: 181 SARINVTGVNGRSRRTVVLTSESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRGGWSRGLG 240

Query: 261 ---GQGVGGGGG------GRGRGR--------GRGRGQGRKKPVEKSSDELDKELENYHA 306
              G+G+GGGGG      GRGRGR        GRGRGQGRKKPVEKSS ELDKELENYHA
Sbjct: 241 GGGGRGLGGGGGRGLGGRGRGRGRGSGSGSGSGRGRGQGRKKPVEKSSAELDKELENYHA 300

[Close]

BLAST of Bhi01G001493 vs. ExPASy TrEMBL
Match: A0A1S3C452 (THO complex subunit 4D OS=Cucumis melo OX=3656 GN=LOC103496802 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.8e-141
Identity = 267/285 (93.68%), Postives = 275/285 (96.49%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           M TPLDMSLEDVIKK+NREKLRARGRARRGRGAGGSFNGGRGVV+GSVRRGPLGINARAS
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINARAS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           AYSIRKPP RMKNVQWQHDLFEDSLRASGISGI+IGTKLYVSNLDYGV+KEDIRELFSEI
Sbjct: 61  AYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIEMLGDNAEMPV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEMPV 180

Query: 201 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNRGQG 260
           SARINVTG NGR+RRTVVLTPESGR A+ NVVNPFPGPSHRGGLRN RGRGRG W RG G
Sbjct: 181 SARINVTGTNGRNRRTVVLTPESGRNATFNVVNPFPGPSHRGGLRNARGRGRGAWTRGVG 240

Query: 261 VGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
           +GG GGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT
Sbjct: 241 LGGSGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 285

[Close]

BLAST of Bhi01G001493 vs. ExPASy TrEMBL
Match: A0A6J1J564 (THO complex subunit 4D-like OS=Cucurbita maxima OX=3661 GN=LOC111481464 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.6e-134
Identity = 266/305 (87.21%), Postives = 277/305 (90.82%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           MATPLDMSLEDVIKK+NREKLRARGRARRGRGAGGS+NGGR VV+GSVRRGPLGINAR S
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           A+SI KPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGV+KEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 201 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNR--- 260
           SARINVTGVNGRSRRTVVLT ESGRT SSN VNPFPGPSHRGGLR+GRGRGRGGW+R   
Sbjct: 181 SARINVTGVNGRSRRTVVLTSESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRGGWSRGLG 240

Query: 261 ---GQGVGGGGG------GRGRGR--------GRGRGQGRKKPVEKSSDELDKELENYHA 306
              G+G+GGGGG      GRGRGR        GRGRGQGRKKPVEKSS ELDKELENYHA
Sbjct: 241 GGGGRGLGGGGGRGLGGRGRGRGRGSGSGSGSGRGRGQGRKKPVEKSSAELDKELENYHA 300

[Close]

BLAST of Bhi01G001493 vs. ExPASy TrEMBL
Match: A0A6J1FAB9 (THO complex subunit 4D-like OS=Cucurbita moschata OX=3662 GN=LOC111442248 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.8e-134
Identity = 265/295 (89.83%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           MATPLDMSLEDVIKK+NREKLRARGRARRGRGAGGS+NGGR VV+GSVRRGPLGINAR S
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           A+SI KPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGV+KEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 201 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRN--GRGRGRGGWNRG 260
           SARINVTGVNGRSRRTVVLT ESGRT SS+ VNPFPGPSHRGGLR+  GRGRGRGGW+RG
Sbjct: 181 SARINVTGVNGRSRRTVVLTSESGRTGSSHAVNPFPGPSHRGGLRSGRGRGRGRGGWSRG 240

Query: 261 QGVGG----GGGGRGRGR----GRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
            G GG    GGGGRGRGR    GRGRGQGRKKPVEKSS ELDKELENYHAEAMQT
Sbjct: 241 LGGGGGRGLGGGGRGRGRGSGSGRGRGQGRKKPVEKSSAELDKELENYHAEAMQT 295

[Close]

BLAST of Bhi01G001493 vs. ExPASy TrEMBL
Match: A0A6J1CP51 (THO complex subunit 4D-like OS=Momordica charantia OX=3673 GN=LOC111013262 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.6e-129
Identity = 256/285 (89.82%), Postives = 268/285 (94.04%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           MATPLDMSLED+IKK+NREKLRARGRARRGRGAGGSFNGGR VV+GS+RRGPL IN R S
Sbjct: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           A+SI KPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGV+KEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIE+LGDNAEMPV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180

Query: 201 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNRGQG 260
           SARINVTG+NGRSRRTVVLT ESGRT SS VVN FPGPS+RG LR GRGRGRGGW+RGQ 
Sbjct: 181 SARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALR-GRGRGRGGWSRGQ- 240

Query: 261 VGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 306
            G  GGGRGRGRGRGRG GRKK VEKSSDELDK+LENYHAEAMQT
Sbjct: 241 -GQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 281

[Close]

BLAST of Bhi01G001493 vs. ExPASy TrEMBL
Match: A0A0A0L717 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G302100 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 7.0e-101
Identity = 189/200 (94.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 21  MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 80
           M TPLDMSLEDVIKK+NREKLRARGRARRGRGAGGSFNGGRGVV+GSVRRGPLGINARAS
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINARAS 60

Query: 81  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 140
           AYSIRKPP RMKNVQWQHDLFEDSLRASGISGI+IGTKLYVSNLDYGV+KEDI+ELFSEI
Sbjct: 61  AYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKELFSEI 120

Query: 141 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 200
           GD+KRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIEMLGDNAEMPV
Sbjct: 121 GDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEMPV 180

Query: 201 SARINVTGVNGRSRRTVVLT 221
           SARINVTG NGR+RRTVVLT
Sbjct: 181 SARINVTGTNGRNRRTVVLT 200

The following BLAST results are available for this feature:

BLAST of Bhi01G001493 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37720.2	2.7e-73	56.70	ALWAYS EARLY 4	[more]
AT5G37720.1	6.7e-72	55.59	ALWAYS EARLY 4	[more]
AT1G66260.1	1.1e-66	52.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G66260.2	1.1e-66	52.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G02530.1	2.4e-45	45.72	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of Bhi01G001493 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ72	9.5e-71	55.59	THO complex subunit 4D OS=Arabidopsis thaliana OX=3702 GN=ALY4 PE=1 SV=1	[more]
Q94EH8	1.6e-65	52.88	THO complex subunit 4C OS=Arabidopsis thaliana OX=3702 GN=ALY3 PE=1 SV=1	[more]
Q8L719	3.4e-44	45.72	THO complex subunit 4B OS=Arabidopsis thaliana OX=3702 GN=ALY2 PE=1 SV=1	[more]
Q8L773	7.8e-41	42.61	THO complex subunit 4A OS=Arabidopsis thaliana OX=3702 GN=ALY1 PE=1 SV=1	[more]
O08583	2.3e-32	40.88	THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3	[more]

BLAST of Bhi01G001493 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896761.1	4.4e-150	100.00	THO complex subunit 4D-like [Benincasa hispida]	[more]
XP_008457020.1	3.7e-141	93.68	PREDICTED: THO complex subunit 4D [Cucumis melo]	[more]
XP_004145851.1	1.0e-138	92.66	THO complex subunit 4D [Cucumis sativus] >KAE8650594.1 hypothetical protein Csa_...	[more]
XP_023527122.1	1.5e-134	90.17	THO complex subunit 4D [Cucurbita pepo subsp. pepo]	[more]
XP_022982649.1	3.4e-134	87.21	THO complex subunit 4D-like [Cucurbita maxima] >XP_022982650.1 THO complex subun...	[more]

BLAST of Bhi01G001493 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C452	1.8e-141	93.68	THO complex subunit 4D OS=Cucumis melo OX=3656 GN=LOC103496802 PE=4 SV=1	[more]
A0A6J1J564	1.6e-134	87.21	THO complex subunit 4D-like OS=Cucurbita maxima OX=3661 GN=LOC111481464 PE=4 SV=...	[more]
A0A6J1FAB9	2.8e-134	89.83	THO complex subunit 4D-like OS=Cucurbita moschata OX=3662 GN=LOC111442248 PE=4 S...	[more]
A0A6J1CP51	3.6e-129	89.82	THO complex subunit 4D-like OS=Momordica charantia OX=3673 GN=LOC111013262 PE=4 ...	[more]
A0A0A0L717	7.0e-101	94.50	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G302100 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025715	Chromatin target of PRMT1 protein, C-terminal	SMART	SM01218	FoP_duplication_2	coord: 236..305 e-value: 9.1E-13 score: 58.4
IPR025715	Chromatin target of PRMT1 protein, C-terminal	PFAM	PF13865	FoP_duplication	coord: 242..300 e-value: 3.2E-10 score: 40.5
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 118..190 e-value: 1.4E-18 score: 77.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 119..187 e-value: 2.4E-14 score: 52.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 117..194 score: 15.289199
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 114..193 e-value: 2.9E-21 score: 77.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..305
None	No IPR available	PANTHER	PTHR19965:SF33	THO COMPLEX SUBUNIT 4C	coord: 21..305
None	No IPR available	PANTHER	PTHR19965	RNA AND EXPORT FACTOR BINDING PROTEIN	coord: 21..305
None	No IPR available	CDD	cd12680	RRM_THOC4	coord: 117..191 e-value: 3.60765E-43 score: 140.853
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 66..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M001493	Bhi01M001493	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding