Bhi01G001446 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G001446
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Location	chr1: 41349996 .. 41350268 (+)
RNA-Seq Expression	Bhi01G001446
Synteny	Bhi01G001446

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCAATAAGTTAATTCCTGTTGATGTGTATTTGCCGGGTTGTCCACCTAAACCCGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTGTTTTACGACCAACCACAAATTTCATGTTGGCAATCGACGAGGGATATTCAAAGCATCTAGGAAGAAAGGACGAGCGGTTACTCTAGCAACAGATACGTTCTAA

mRNA sequence

ATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCAATAAGTTAATTCCTGTTGATGTGTATTTGCCGGGTTGTCCACCTAAACCCGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTGTTTTACGACCAACCACAAATTTCATGTTGGCAATCGACGAGGGATATTCAAAGCATCTAGGAAGAAAGGACGAGCGGTTACTCTAGCAACAGATACGTTCTAA

Coding sequence (CDS)

ATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCAATAAGTTAATTCCTGTTGATGTGTATTTGCCGGGTTGTCCACCTAAACCCGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTGTTTTACGACCAACCACAAATTTCATGTTGGCAATCGACGAGGGATATTCAAAGCATCTAGGAAGAAAGGACGAGCGGTTACTCTAGCAACAGATACGTTCTAA

Protein sequence

MFSTDSYSTVRGVNKLIPVDVYLPGCPPKPDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHVGNRRGIFKASRKKGRAVTLATDTF

Homology

[Close]

BLAST of Bhi01G001446 vs. TAIR 10
Match: ATCG00430.1 (photosystem II reaction center protein G )

HSP 1 Score: 120.9 bits (302), Expect = 5.1e-28
Identity = 60/78 (76.92%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKI+REIY+DRI+ Q+ NR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAREIYKDRIRPQQGNR 173

Query: 61  CFTTNHKF------HVGN 69
           CFTTNHKF      H+GN
Sbjct: 174 CFTTNHKFFVVRSPHIGN 191

[Close]

BLAST of Bhi01G001446 vs. TAIR 10
Match: AT5G11770.1 (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial )

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06
Identity = 21/41 (51.22%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 6   SYSTVRGVNKLIPVDVYLPGCPPKPDA----ITKLRKKISR 43
           SYS VRG ++++PVD+Y+PGCPP  +A    + +L+KKI+R
Sbjct: 168 SYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINR 208

[Close]

BLAST of Bhi01G001446 vs. ExPASy Swiss-Prot
Match: Q4VZH1 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhK PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.7e-31
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. ExPASy Swiss-Prot
Match: B0Z4L3 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola OX=3940 GN=ndhK PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 8.2e-31
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRI+SQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISREIYEDRIRSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. ExPASy Swiss-Prot
Match: B0Z4U7 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera biennis OX=3942 GN=ndhK PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 8.2e-31
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRI+SQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISREIYEDRIRSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. ExPASy Swiss-Prot
Match: Q9MTP4 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera elata subsp. hookeri OX=85636 GN=ndhK PE=3 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 8.2e-31
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRI+SQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISREIYEDRIRSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. ExPASy Swiss-Prot
Match: B0Z531 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera glazioviana OX=482428 GN=ndhK PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 8.2e-31
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRI+SQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISREIYEDRIRSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. NCBI nr
Match: ALO22094.1 (NdhK [Cucurbita ficifolia] >QWV60844.1 NADH-plastoquinone oxidoreductase subunit K [Cucurbita ficifolia] >QZL38790.1 NADH-plastoquinone oxidoreductase subunit K [Cucurbita ficifolia])

HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVGN 69
           CFTTNHKFHVG+
Sbjct: 174 CFTTNHKFHVGS 185

[Close]

BLAST of Bhi01G001446 vs. NCBI nr
Match: YP_009753878.1 (NADH dehydrogenase subunit K [Trichosanthes lobata] >QIT05826.1 NADH dehydrogenase subunit K [Trichosanthes lobata])

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. NCBI nr
Match: YP_009945421.1 (NADH-plastoquinone oxidoreductase subunit K [Sechium edule] >QOE55951.1 NADH-plastoquinone oxidoreductase subunit K [Sechium edule])

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. NCBI nr
Match: QIT04137.1 (NADH dehydrogenase subunit K [Sechium edule])

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. NCBI nr
Match: YP_009430631.1 (NADH dehydrogenase subunit K [Gynostemma cardiospermum] >YP_009439808.1 NADH dehydrogenase subunit K [Gynostemma laxiflorum] >YP_010015143.1 NADH dehydrogenase subunit K [Gynostemma yixingense] >ART65086.1 NADH dehydrogenase subunit K [Gynostemma cardiospermum] >ATG86666.1 NADH dehydrogenase subunit K [Gynostemma laxiflorum] >QOI14268.1 NADH dehydrogenase subunit K [Gynostemma yixingense])

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. ExPASy TrEMBL
Match: A0A0S2IER2 (NADH-quinone oxidoreductase subunit B OS=Cucurbita ficifolia OX=37645 GN=ndhK PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVGN 69
           CFTTNHKFHVG+
Sbjct: 174 CFTTNHKFHVGS 185

[Close]

BLAST of Bhi01G001446 vs. ExPASy TrEMBL
Match: A0A218KG48 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhK PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. ExPASy TrEMBL
Match: A0A410HF89 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhK PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. ExPASy TrEMBL
Match: A0A1X9Q1M2 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhK PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

[Close]

BLAST of Bhi01G001446 vs. ExPASy TrEMBL
Match: A0A1S4EU13 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis melo OX=3656 GN=ndhK PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MFSTDSYSTVRGVNKLIPVDVYLPGCPPKP----DAITKLRKKISREIYEDRIKSQEENR 60
           MFSTDSYSTVRGV+KLIPVDVYLPGCPPKP    DAITKLRKKISREIYEDRIKSQEENR
Sbjct: 114 MFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

Query: 61  CFTTNHKFHVG 68
           CFTTNHKFHVG
Sbjct: 174 CFTTNHKFHVG 184

The following BLAST results are available for this feature:

BLAST of Bhi01G001446 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00430.1	5.1e-28	76.92	photosystem II reaction center protein G	[more]
AT5G11770.1	1.1e-06	51.22	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	[more]

BLAST of Bhi01G001446 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH1	3.7e-31	92.96	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=36...	[more]
B0Z4L3	8.2e-31	91.55	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola...	[more]
B0Z4U7	8.2e-31	91.55	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera biennis OX=...	[more]
Q9MTP4	8.2e-31	91.55	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera elata subsp...	[more]
B0Z531	8.2e-31	91.55	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera glazioviana...	[more]

BLAST of Bhi01G001446 vs. NCBI nr


Match Name	E-value	Identity	Description
ALO22094.1	2.2e-28	91.67	NdhK [Cucurbita ficifolia] >QWV60844.1 NADH-plastoquinone oxidoreductase subunit...	[more]
YP_009753878.1	2.8e-28	92.96	NADH dehydrogenase subunit K [Trichosanthes lobata] >QIT05826.1 NADH dehydrogena...	[more]
YP_009945421.1	2.8e-28	92.96	NADH-plastoquinone oxidoreductase subunit K [Sechium edule] >QOE55951.1 NADH-pla...	[more]
QIT04137.1	2.8e-28	92.96	NADH dehydrogenase subunit K [Sechium edule]	[more]
YP_009430631.1	2.8e-28	92.96	NADH dehydrogenase subunit K [Gynostemma cardiospermum] >YP_009439808.1 NADH deh...	[more]

BLAST of Bhi01G001446 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IER2	1.0e-28	91.67	NADH-quinone oxidoreductase subunit B OS=Cucurbita ficifolia OX=37645 GN=ndhK PE...	[more]
A0A218KG48	1.4e-28	92.96	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A410HF89	1.4e-28	92.96	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trichosanthes kirilow...	[more]
A0A1X9Q1M2	1.4e-28	92.96	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A1S4EU13	1.4e-28	92.96	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis melo OX=3656 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.12280		coord: 1..63 e-value: 2.7E-14 score: 54.6
None	No IPR available	PANTHER	PTHR11995	NADH DEHYDROGENASE	coord: 1..68
None	No IPR available	PANTHER	PTHR11995:SF14	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL	coord: 1..68
None	No IPR available	SUPERFAMILY	56770	HydA/Nqo6-like	coord: 5..48
IPR006137	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	PFAM	PF01058	Oxidored_q6	coord: 9..35 e-value: 2.5E-6 score: 27.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M001446	Bhi01M001446	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0051536	iron-sulfur cluster binding