Bhi01G001436 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G001436
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	MADS-box domain-containing protein
Location	chr1: 40830482 .. 40831093 (+)
RNA-Seq Expression	Bhi01G001436
Synteny	Bhi01G001436

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGGCATACGAGCTTTCCACCCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTCGAAACTTGGCCTCCCAATCACGATCAAATCAATGCTATGATCCGTTCCTACAAATCCCGCTCTTTCCCCAAACACTCATCCCGCAACTCCTCTTATAATCTCAAACAATTCTTCTCCGATCGCAAGAACAAAATTCTAACAGACACATCTAAACTGCGCCACAATGTTGAGGATCACCACCTTGATTCTCTATCCGAGCATCAATTGAAGGAGCTGTTGGCCACTTTGGACTCCAAAATTGGAGTTGCAGATGGCATGATTCAGTTCATGGATGCCGATTATGACCACTTGATTGAGCAAGCCTTTGGCATGGACACACTTCCTTCTGAAACAGAGGAACCCACTACTGAATGTGACATATCCGAGTTTTTGATTGAGCCAGACGAGTTTGAGTACAATGTGGAAGGTTTTCAATCTCCATTGGAGGACGAGTTTGAATACAATGTGGAGGGTTTTCAATCTCTATTGGAGGACGAGTTTCTCGGAACGCTAGTTCTAAATAACCCCTTTAAGTTCGATTCTTAA

mRNA sequence

ATGAAGAAGGCATACGAGCTTTCCACCCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTCGAAACTTGGCCTCCCAATCACGATCAAATCAATGCTATGATCCGTTCCTACAAATCCCGCTCTTTCCCCAAACACTCATCCCGCAACTCCTCTTATAATCTCAAACAATTCTTCTCCGATCGCAAGAACAAAATTCTAACAGACACATCTAAACTGCGCCACAATGTTGAGGATCACCACCTTGATTCTCTATCCGAGCATCAATTGAAGGAGCTGTTGGCCACTTTGGACTCCAAAATTGGAGTTGCAGATGGCATGATTCAGTTCATGGATGCCGATTATGACCACTTGATTGAGCAAGCCTTTGGCATGGACACACTTCCTTCTGAAACAGAGGAACCCACTACTGAATGTGACATATCCGAGTTTTTGATTGAGCCAGACGAGTTTGAGTACAATGTGGAAGGTTTTCAATCTCCATTGGAGGACGAGTTTGAATACAATGTGGAGGGTTTTCAATCTCTATTGGAGGACGAGTTTCTCGGAACGCTAGTTCTAAATAACCCCTTTAAGTTCGATTCTTAA

Coding sequence (CDS)

ATGAAGAAGGCATACGAGCTTTCCACCCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTCGAAACTTGGCCTCCCAATCACGATCAAATCAATGCTATGATCCGTTCCTACAAATCCCGCTCTTTCCCCAAACACTCATCCCGCAACTCCTCTTATAATCTCAAACAATTCTTCTCCGATCGCAAGAACAAAATTCTAACAGACACATCTAAACTGCGCCACAATGTTGAGGATCACCACCTTGATTCTCTATCCGAGCATCAATTGAAGGAGCTGTTGGCCACTTTGGACTCCAAAATTGGAGTTGCAGATGGCATGATTCAGTTCATGGATGCCGATTATGACCACTTGATTGAGCAAGCCTTTGGCATGGACACACTTCCTTCTGAAACAGAGGAACCCACTACTGAATGTGACATATCCGAGTTTTTGATTGAGCCAGACGAGTTTGAGTACAATGTGGAAGGTTTTCAATCTCCATTGGAGGACGAGTTTGAATACAATGTGGAGGGTTTTCAATCTCTATTGGAGGACGAGTTTCTCGGAACGCTAGTTCTAAATAACCCCTTTAAGTTCGATTCTTAA

Protein sequence

MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSYNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMDADYDHLIEQAFGMDTLPSETEEPTTECDISEFLIEPDEFEYNVEGFQSPLEDEFEYNVEGFQSLLEDEFLGTLVLNNPFKFDS

Homology

[Close]

BLAST of Bhi01G001436 vs. TAIR 10
Match: AT5G58890.1 (AGAMOUS-like 82 )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 36/120 (30.00%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 2   KKAYELSTLCDVQTCVFIASDCDPS----THFETWPPNHDQINAMIRSYKSRSFPKHSSR 61
           KKA E STLC V+TC+ +      +    +  E WP +  ++ A+IR YK       +S 
Sbjct: 30  KKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWPKDETKVRAIIRKYKD---TVSTSC 89

Query: 62  NSSYNLKQFFSD--RKNKILTDTSKLRHNVE---DHHLDSLSEHQLKELLATLDSKIGVA 113
               N++ F +D  + N+++T     R N     +  LD  S  QL  +   +DSK+  A
Sbjct: 90  RKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of Bhi01G001436 vs. TAIR 10
Match: AT5G40220.1 (AGAMOUS-like 43 )

HSP 1 Score: 45.1 bits (105), Expect = 8.0e-05
Identity = 37/128 (28.91%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 2   KKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSY 61
           KKA EL TLCD++ CV       P    +TWPP  +++  +   Y   +  +   R  S 
Sbjct: 30  KKASELCTLCDIEACVIYYG---PDGELKTWPPEREKVRDIALRYSQLN--EALRRKKSV 89

Query: 62  NLKQFFS-DRKNKILTDTSKLRH------NVEDHHL-DSLSEHQLKELLATLDSKIGVAD 121
           NL  F +  +KNK L +T K R       NV  + L D     Q+  L+ +L+  +    
Sbjct: 90  NLHGFLNKKKKNKGLKNTDKKRKTSLKKVNVLKYPLADHYPPDQVSPLIQSLELHVSKFH 149

[Close]

BLAST of Bhi01G001436 vs. TAIR 10
Match: AT3G18650.1 (AGAMOUS-like 103 )

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 35/118 (29.66%), Postives = 54/118 (45.76%), Query Frame = 0


Query: 2   KKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSY 61
           KKA ELS LCD+  CV        +   +TWP   +++ A+ R Y   S  K   R  S 
Sbjct: 45  KKAKELSILCDIDVCVICYGS---NGELKTWPEEREKVKAIARRYGELSETKR--RKGSV 104

Query: 62  NLKQFF---------SDRKNKI-LTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKI 110
           +L +F           + K KI +    K+++ V D   D+ S  QL  L+ +L+  +
Sbjct: 105 DLHEFLEKMNKDDPEKEEKKKIKVRRVPKVKYPVWDPRFDNYSVEQLMGLVQSLERNL 157

[Close]

BLAST of Bhi01G001436 vs. TAIR 10
Match: AT5G39750.1 (AGAMOUS-like 81 )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 49/210 (23.33%), Postives = 89/210 (42.38%), Query Frame = 0


Query: 2   KKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSY 61
           KKA EL TLCD++ CV       P    +TWPP  +++  +   Y   +  +   R  S 
Sbjct: 37  KKASELCTLCDIEACVIYYG---PDGELKTWPPEREKVEDIALRYSQLN--EALRRKKSV 96

Query: 62  NLKQFFSDRKNKI-------LTDTSKLRHNVEDHHL------DSLSEHQLKELLATLDSK 121
            L  F + +K+K        +TD   L+  +++ ++      D  S  Q+ +L+ +L+  
Sbjct: 97  TLYDFLNKKKDKTNLEKKAKITDNDDLKTCLKNVNILKYPLADHYSPDQVSQLIQSLEPH 156

Query: 122 IGVADGMIQFMDADYDHLIEQAFGMDTLPSETEEPTTECDISEFLIEPDEFEYNVEG--- 181
           +      I+F+++   H   +        S     T   + S+F +    F YN      
Sbjct: 157 VSKVRERIRFVESQ-KHKETKPDHQSLASSSLNHQTQSLNPSQFSL----FMYNHGDNTL 216

Query: 182 FQSPLEDEFEYNVEGFQSLLEDEFLGTLVL 196
            Q P+     +N + F +LLE   L + ++
Sbjct: 217 SQIPVSAS-NFNQDYFSALLEQSELKSQIM 235

[Close]

BLAST of Bhi01G001436 vs. TAIR 10
Match: AT5G41200.1 (AGAMOUS-like 75 )

HSP 1 Score: 42.4 bits (98), Expect = 5.2e-04
Identity = 49/203 (24.14%), Postives = 86/203 (42.36%), Query Frame = 0


Query: 2   KKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSY 61
           KKA EL TLCD++ CV       P    +TWP   +++  +   Y   +  +   R  S 
Sbjct: 30  KKASELCTLCDIEACVIYYG---PDGELKTWPKEKEKVRDIALRYSLLN--EALRRKKSV 89

Query: 62  NLKQFFSDRKNKILTDTSK-----------LRHNVEDHHLDSLSEHQLKELLATLDSKIG 121
           NL  F + +KNK L + +K           L++ + DH+       Q+  L+ +L+  + 
Sbjct: 90  NLHGFLNKKKNKGLKNPNKKMKTSLKNVNILKYPLADHY----PPDQVSPLIQSLELHVS 149

Query: 122 VADGMIQFMDADYDHLIEQAFGMDTLPSETEEPTTECDISEFLIEPDEFEYNVEG---FQ 181
                ++F+++   +  +        PS     T   + S+F +    F YN       Q
Sbjct: 150 KFQERLRFLESQKQNQTKPDH-QSLTPSSLNHYTQSLNPSQFSL----FMYNHGDNTLSQ 209

Query: 182 SPLEDEFEYNVEGFQSLLEDEFL 191
            P+     +N + F +LLE+  L
Sbjct: 210 IPVSAS-NFNQDYFSALLEESEL 217

[Close]

BLAST of Bhi01G001436 vs. ExPASy Swiss-Prot
Match: Q9FIM0 (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 36/120 (30.00%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 2   KKAYELSTLCDVQTCVFIASDCDPS----THFETWPPNHDQINAMIRSYKSRSFPKHSSR 61
           KKA E STLC V+TC+ +      +    +  E WP +  ++ A+IR YK       +S 
Sbjct: 30  KKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWPKDETKVRAIIRKYKD---TVSTSC 89

Query: 62  NSSYNLKQFFSD--RKNKILTDTSKLRHNVE---DHHLDSLSEHQLKELLATLDSKIGVA 113
               N++ F +D  + N+++T     R N     +  LD  S  QL  +   +DSK+  A
Sbjct: 90  RKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of Bhi01G001436 vs. NCBI nr
Match: XP_038877825.1 (agamous-like MADS-box protein MADS1 [Benincasa hispida])

HSP 1 Score: 412.1 bits (1058), Expect = 2.7e-111
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS
Sbjct: 29  MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMD 120
           YNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMD
Sbjct: 89  YNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMD 148

Query: 121 ADYDHLIEQAFGMDTLPSETEEPTTECDISEFLIEPDEFEYNVEGFQSPLEDEFEYNVEG 180
           ADYDHLIEQAFGMDTLPSETEEPTTECDISEFLIEPDEFEYNVEGFQSPLEDEFEYNVEG
Sbjct: 149 ADYDHLIEQAFGMDTLPSETEEPTTECDISEFLIEPDEFEYNVEGFQSPLEDEFEYNVEG 208

Query: 181 FQSLLEDEFLGTLVLNNPFKFDS 204
           FQSLLEDEFLGTLVLNNPFKFDS
Sbjct: 209 FQSLLEDEFLGTLVLNNPFKFDS 231

[Close]

BLAST of Bhi01G001436 vs. NCBI nr
Match: XP_004145650.1 (agamous-like MADS-box protein AGL82 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 9.4e-64
Identity = 141/206 (68.45%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           +KKAYELSTLCDVQTC+FIASDCDPSTHFETWPPNH QI+ MIRSYKS SF K    NSS
Sbjct: 29  IKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTK---PNSS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMD 120
           Y+L +FFSDRKNKILT+TSKL HNV DH     SEHQL ELL  LDSKI VA+ MI+FM+
Sbjct: 89  YDLNRFFSDRKNKILTNTSKLLHNVVDHQ----SEHQLMELLDALDSKIRVANDMIEFME 148

Query: 121 ADYDHLIEQAFGMDTLPSETE-EPTTECDISEFLIEPDEFEYNVEGFQSPLEDEFEYNVE 180
           ADYDHLI+QA GMDT PS+TE E TT+ ++S+   EPDEFE              EYNVE
Sbjct: 149 ADYDHLIDQAIGMDTPPSQTEDEETTQFNVSDLFNEPDEFE--------------EYNVE 208

Query: 181 GFQSLLEDEFLGTLVLNNP---FKFD 203
           GFQSLLED+FL TLV NNP   F FD
Sbjct: 209 GFQSLLEDKFLETLVQNNPIPDFDFD 213

[Close]

BLAST of Bhi01G001436 vs. NCBI nr
Match: KAE8650565.1 (hypothetical protein Csa_011366 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 9.4e-64
Identity = 141/206 (68.45%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           +KKAYELSTLCDVQTC+FIASDCDPSTHFETWPPNH QI+ MIRSYKS SF K    NSS
Sbjct: 63  IKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTK---PNSS 122

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMD 120
           Y+L +FFSDRKNKILT+TSKL HNV DH     SEHQL ELL  LDSKI VA+ MI+FM+
Sbjct: 123 YDLNRFFSDRKNKILTNTSKLLHNVVDHQ----SEHQLMELLDALDSKIRVANDMIEFME 182

Query: 121 ADYDHLIEQAFGMDTLPSETE-EPTTECDISEFLIEPDEFEYNVEGFQSPLEDEFEYNVE 180
           ADYDHLI+QA GMDT PS+TE E TT+ ++S+   EPDEFE              EYNVE
Sbjct: 183 ADYDHLIDQAIGMDTPPSQTEDEETTQFNVSDLFNEPDEFE--------------EYNVE 242

Query: 181 GFQSLLEDEFLGTLVLNNP---FKFD 203
           GFQSLLED+FL TLV NNP   F FD
Sbjct: 243 GFQSLLEDKFLETLVQNNPIPDFDFD 247

[Close]

BLAST of Bhi01G001436 vs. NCBI nr
Match: XP_038887166.1 (MADS-box protein SVP-like [Benincasa hispida])

HSP 1 Score: 239.2 bits (609), Expect = 3.1e-59
Identity = 131/175 (74.86%), Postives = 145/175 (82.86%), Query Frame = 0


Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQI++MIRSYKS SFPK S   +S
Sbjct: 29  MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQIHSMIRSYKSHSFPKLS--RNS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVE---DHHLDSLSEHQLKELLATLDSKIGVADGMIQ 120
           YNL QFFS R NKI T+TSKLRHNV+   D HLDSLSEHQL+ELLA+LDSKIGV DGMIQ
Sbjct: 89  YNLHQFFSHRMNKIATETSKLRHNVDKFKDRHLDSLSEHQLEELLASLDSKIGVVDGMIQ 148

Query: 121 FMDADYDHLIEQAFG---MDT---LPSETEEPTTECDISEFLIEPDEFEYNVEGF 167
           FM+ADYDHLIE+  G   +DT   LPSET+E T E DI+E+LI  +  EYNVE F
Sbjct: 149 FMEADYDHLIEEVSGFSSIDTPSFLPSETKE-TPELDITEWLIGTNGLEYNVEEF 200

[Close]

BLAST of Bhi01G001436 vs. NCBI nr
Match: XP_023526169.1 (agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-41
Identity = 99/150 (66.00%), Postives = 117/150 (78.00%), Query Frame = 0


Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           MKKAYELSTLCDVQTCV IASD      F+TWP + +Q+ AMIRSYKS+SF KHS++ SS
Sbjct: 29  MKKAYELSTLCDVQTCVVIASD-----EFQTWPSDRNQVEAMIRSYKSQSFCKHSAK-SS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATLDSKIGVAD 120
           Y+L QFFSDRKNKI+T+TSKLR  V+       DH LDSLSEHQLK LLATLDSKIGVAD
Sbjct: 89  YDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLDSLSEHQLKVLLATLDSKIGVAD 148

Query: 121 GMIQFMDADYDHLIEQAFGMDTLPSETEEP 144
            MI+FM+ADYD+LIE A  + ++  +T  P
Sbjct: 149 SMIEFMEADYDYLIEGAVEISSIDKQTLSP 172

[Close]

BLAST of Bhi01G001436 vs. ExPASy TrEMBL
Match: A0A0A0LAL9 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.5e-64
Identity = 141/206 (68.45%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           +KKAYELSTLCDVQTC+FIASDCDPSTHFETWPPNH QI+ MIRSYKS SF K    NSS
Sbjct: 29  IKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTK---PNSS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMD 120
           Y+L +FFSDRKNKILT+TSKL HNV DH     SEHQL ELL  LDSKI VA+ MI+FM+
Sbjct: 89  YDLNRFFSDRKNKILTNTSKLLHNVVDHQ----SEHQLMELLDALDSKIRVANDMIEFME 148

Query: 121 ADYDHLIEQAFGMDTLPSETE-EPTTECDISEFLIEPDEFEYNVEGFQSPLEDEFEYNVE 180
           ADYDHLI+QA GMDT PS+TE E TT+ ++S+   EPDEFE              EYNVE
Sbjct: 149 ADYDHLIDQAIGMDTPPSQTEDEETTQFNVSDLFNEPDEFE--------------EYNVE 208

Query: 181 GFQSLLEDEFLGTLVLNNP---FKFD 203
           GFQSLLED+FL TLV NNP   F FD
Sbjct: 209 GFQSLLEDKFLETLVQNNPIPDFDFD 213

[Close]

BLAST of Bhi01G001436 vs. ExPASy TrEMBL
Match: A0A6J1F370 (agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.9e-41
Identity = 112/202 (55.45%), Postives = 141/202 (69.80%), Query Frame = 0


Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           MKKAYELSTLCDVQTCV IAS+      FETWP +  Q+ AMIRSYKS+SF K S++ SS
Sbjct: 29  MKKAYELSTLCDVQTCVVIASE-----EFETWPSDRTQVEAMIRSYKSQSFCKQSAK-SS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATLDSKIGVAD 120
           Y+L QFFSDRKNKI+T+TSKLR  V+       DH LDSLSEHQLK L+ATLDSKIGVAD
Sbjct: 89  YDLNQFFSDRKNKIVTETSKLREKVQKSKDTNSDHCLDSLSEHQLKALMATLDSKIGVAD 148

Query: 121 GMIQFMDADYDHLIEQAFGMDTL------PSETEEPTTECDISEFLIEPDEFEYNVEGFQ 180
            MI+FM+ADYD+LIE A  + ++      P ET E + E +ISE  +E + ++Y +EG  
Sbjct: 149 SMIEFMEADYDYLIEGAVEISSIDKQIFSPLET-EASPELNISELGMEAN-YDYLIEGDT 208

Query: 181 SPLEDEFEYNVEGFQSLLEDEF 190
             L  + +  +  F++ L  EF
Sbjct: 209 EILSVDTQ-TLSPFETELSTEF 221

[Close]

BLAST of Bhi01G001436 vs. ExPASy TrEMBL
Match: A0A5D3DXK1 (Agamous-like MADS-box protein AGL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00710 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-24
Identity = 69/104 (66.35%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 42  MIRSYKSRSFPKHSSRNSSYNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKEL 101
           MIRSYKS SF K    NSSY+L +FFSDRKNKILT TSKL HNV DH     S++QL EL
Sbjct: 1   MIRSYKSHSFTK---PNSSYDLNRFFSDRKNKILTHTSKLLHNVRDHQ----SKYQLVEL 60

Query: 102 LATLDSKIGVADGMIQFMDADYDHLIEQAFGMDTLPSETEEPTT 146
           LA LDSKI V + MI+FM+ADYD LI+QA GMDT PS+TE+  T
Sbjct: 61  LAALDSKISVGNNMIEFMEADYDDLIDQAVGMDTSPSQTEDEET 97

[Close]

BLAST of Bhi01G001436 vs. ExPASy TrEMBL
Match: A0A6J1F4C8 (agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC111442271 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.8e-21
Identity = 82/216 (37.96%), Postives = 110/216 (50.93%), Query Frame = 0


Query: 1   MKKAYELSTLCDVQTCVFI-----ASDCDP---STHFETWPPNHDQINAMIRSYKSRSFP 60
           MKKAYELSTLCDV+TCV I     A D DP   S  F TWP N  ++  MI +YK+ +  
Sbjct: 29  MKKAYELSTLCDVRTCVLINGPGFAPDEDPSLSSVEFHTWPSNRSEVEHMIHAYKNGNC- 88

Query: 61  KHSSRNSSYNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATL 120
            +  +   ++L  +FSDRK K++T+  K R  V        D  LD LSE QL+E +  L
Sbjct: 89  -NFQKRKCFDLSDYFSDRKRKLVTEMCKHREKVGKIMWPDWDERLDCLSEQQLREFMNGL 148

Query: 121 DSKIGVADGMIQFMDADYDHLI--------EQAFGMDTLPSETEEPTTECDISEFLIEPD 180
           DS+I  A  M+ FMDAD ++L         E    M    S    P  E +  + L  P+
Sbjct: 149 DSRIEAAGRMVDFMDADNENLFGMFSCEEYENVVQMGGDSSTPVPPLVELESPDSLNSPN 208

Query: 181 ----EFEYNVEGFQSPLEDEFEYNVEGFQSLLEDEF 190
               E   N E  +  LEDE E  +  + +L+ DEF
Sbjct: 209 PNKHEIGCNFENLEFLLEDEDENYMALYANLMNDEF 242

[Close]

BLAST of Bhi01G001436 vs. ExPASy TrEMBL
Match: A0A6J1J5U6 (agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.2e-21
Identity = 82/218 (37.61%), Postives = 114/218 (52.29%), Query Frame = 0


Query: 1   MKKAYELSTLCDVQTCVFI-----ASDCDP---STHFETWPPNHDQINAMIRSYKSRSFP 60
           MKKAYELSTLCDV+TCV I     A D DP   S  F TWP N  ++  MI +YK+ +  
Sbjct: 29  MKKAYELSTLCDVRTCVLINGPGFAPDEDPSLSSVEFHTWPSNRSEVEHMIHAYKNGNC- 88

Query: 61  KHSSRNSSYNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATL 120
            +  +   ++L  +FSDRK K++T+  K R  V        D  LD LSE QL+E +  L
Sbjct: 89  -NLQKRKCFDLSDYFSDRKRKLVTEMCKHREKVGKIMWPDWDERLDCLSEQQLREFMNGL 148

Query: 121 DSKIGVADGMIQFMDADYDHLI-----EQAFGMDTLPSETEEPT---TECDISEFLIEP- 180
           DS+I  A  MI FMDAD ++L      E+   +  +  ++  P     E + ++ L  P 
Sbjct: 149 DSRIEAAGRMIDFMDADNENLFGMFSCEEYENVVQMGGDSSTPVLSLVELESTDSLNSPN 208

Query: 181 -----DEFEYNVEGFQSPLEDEFEYNVEGFQSLLEDEF 190
                DE   N E  +  LEDE E  +  + +L+ DEF
Sbjct: 209 PNPDEDEIGCNFENLEYLLEDEDENYMALYANLMNDEF 244

The following BLAST results are available for this feature:

BLAST of Bhi01G001436 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58890.1	1.2e-05	30.00	AGAMOUS-like 82	[more]
AT5G40220.1	8.0e-05	28.91	AGAMOUS-like 43	[more]
AT3G18650.1	1.4e-04	29.66	AGAMOUS-like 103	[more]
AT5G39750.1	2.3e-04	23.33	AGAMOUS-like 81	[more]
AT5G41200.1	5.2e-04	24.14	AGAMOUS-like 75	[more]

BLAST of Bhi01G001436 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIM0	1.7e-04	30.00	Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=...	[more]

BLAST of Bhi01G001436 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877825.1	2.7e-111	100.00	agamous-like MADS-box protein MADS1 [Benincasa hispida]	[more]
XP_004145650.1	9.4e-64	68.45	agamous-like MADS-box protein AGL82 [Cucumis sativus]	[more]
KAE8650565.1	9.4e-64	68.45	hypothetical protein Csa_011366 [Cucumis sativus]	[more]
XP_038887166.1	3.1e-59	74.86	MADS-box protein SVP-like [Benincasa hispida]	[more]
XP_023526169.1	1.7e-41	66.00	agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Bhi01G001436 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAL9	4.5e-64	68.45	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE...	[more]
A0A6J1F370	1.9e-41	55.45	agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717...	[more]
A0A5D3DXK1	2.1e-24	66.35	Agamous-like MADS-box protein AGL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1F4C8	4.8e-21	37.96	agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC11144227...	[more]
A0A6J1J5U6	6.2e-21	37.61	agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 1..22 e-value: 2.5E-6 score: 26.9
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..33 score: 8.577559
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 1..74 e-value: 1.1E-9 score: 40.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 1..57
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..126
None	No IPR available	PANTHER	PTHR11945:SF176	AGAMOUS-LIKE MADS-BOX PROTEIN AGL82	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M001436	Bhi01M001436	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding