Bhi01G000820 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G000820
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	50S ribosomal protein l3
Location	chr1: 21932185 .. 21936962 (-)
RNA-Seq Expression	Bhi01G000820
Synteny	Bhi01G000820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTGGAAACTACCTTCTTTTCCCAATTAACTTTCAAAACAACCTCTATCTAAATAATCCGTCGGGAAGGTTATTAACTTTTTATTTATTTATAAATTTATAAATTATAATTTTTTTTAATGTCTTTGATTTTGCTTTCTTAGAACCCTAAACCCCGAGTTGTCACTTGCTGCCGCTCTCTCTCCATCACACTGCATCGATGGCATAACACAGAGAGAAAGATAATGAAATTTCAGTCTCCGAGATCGAAATCAACCCTAAAATCTGAATCAAATCCTTCTTCTTCCTCTTTGATTTTTCCCCATTTCATATCGTAATTGTTGCGATTGGTTCTCACCATGTCGGCTTTATCCAGAGGTCTCATTTCTCGTTTTCGTCTTCTCTCGATCAATTCCGGCGCTTCTCATACAATTACTTCTTCTTCTTCTTCAAGGACAAATGCGTCTTGTTACTATTTCTTCCGCGCTTTCAGTACCCAAGATTTGATCCAGGCCAGCGATGGGTCTTTGCCATCTTCTTCGATTATTGAAGCTAAACCTCGTGTTATGACTCCAAACTCGAAGCGGACGGGTGTTATCGCCGTCAAGTGTGGAATGACGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCATCACTGTGCTCTGGGTTGATGATAATATTGTGTCTCAGGTCAAGACCATTGAGAAAGAGGGTATCACAGCCCTCCAGGTACTGTTCAATTCTCTTCTTCTCATTTTCATTCCGTAAGTGGAGTATTTATTGTTATTTTTAGTTATTGTTGCTACTTAGATGAAATTAGGAGCACGACTGAAAACTAGAAAACGAACATCATTGGCCTTGGTAATGTTGGTTTCTATCGCAGTCGTAGGGCAAAAGAAACAGGAATGAAATGGGATTTTGGCTTAATGATGTTGCGGAGTCTATTTTTAGCCTAATGATGTTCTTTTGGACTGGCGTCCTTGTCACTTAAGGTCGAACTCTCTGTTCTTGTTGGGCCCTTTTTTCGTTGGTGCTTTATATATTCTTTCACTTCTCTCAATGAAAATGTGGTTTCTTAGTTATATATATTCTTTCACTTCTCTCAATGAAAATGTGGTTTCTTAGTTATATATATTCTCTTATGTGAGACAGAGGGATTTGAACCTATTGTTTCTTCCATGGATTTTGTTATTATATTGAACTGAGCTGCACATTGTTGTTTTGGACCAGAATTTCACCATCTCCTATCATGTCATCACTTCCATACGTACACTTAGCTAGACATAACCATTTGTGACTTTTTAAATTTTGATAACTATGGTATGGAGGTTGATGGCTGGACTCCTTGTATCATGCTCATGGGCAATCCCCACTAATCTTTGGAAGGTTTTCACCCACCCAATACTAAATTTGAAAGACAATTAGAGTTTTAAGTGTTGGTAAAATTTACACCTGGTGTTGATTTCACTCTTTCTAAAAAACAACCAATTGTCTCTACCATTAGACCATATGTTTGAGGTTCTTTTTTCTTTTTCAGTTCATACATATTTTATTGCCTACGACTTGAATTTATTGACTAAAGGTGCTACGGTATGGTGCTAGTTAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCTGAGGTAGGTCATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAACTGAGGGAGTTCCCGGTGTCAGAAGATGCACTTCTTCCAGTTGGTACAGCAATTGGCGTTCGTCATTTTGTTCCTGGACAGTATGTTGATGTGACAGGAATAAGTAGAGGGAAAGGTTTTCAGGTGAATTCATTGCACCATTACTCCATTAGTTTTTGAACTCACAACTTTTTTTCCTTTTTATTTTCATTCAATTCCTTATATTTGCTATTATGGTTAAGTCGGTAACGTATCAAAATTACTCAAACAGTTAACTGTTATTGTGGGAACATTAACTCATATAAATGTATGTATCTTCTGAGTTTAGGTCAAAGTACCAATTAAATGCTGTTAATCATCAATGGCAATTGAATGAGCAATTTATGAAATTGAACTGCAACAAATGATGACTGTAAACTAGTGGCGAGTTTTAAAAAACATTGTCGGTCCCTTTTTTCTTCCTTCCTTGGCATTGATGTTTCTAGTCAATTATGTTCATCAACATTATTCTGTATGTACTGATATTTCTTCCAATGATTCTTAAATATGCTATTTTAAATGGTAACACTGCATAATGTGATATCAAGGACATGATCTATTTGTCTTTGCATCAAGCATTACGGATGATGTATGACTTGTTATGTTTAATTACCCAAAACTTTCTTTGATGTCCAACTTACAACTCAAACTTTAACTTATGGAGCAAGTCAAATCCAATTAAAGTATCAAGTTACATGAAATGAACATATAGTTGTAAGAGATCATATCTTGCAAAACAACCATCCAAATGACAGAATGCTAAAACCACAAGAGTAAAGATCTTTATTTCAAAACTCAATTGAACAACCTCACGGTGTGCCACTAATAACTAAACTTCAAATTCTAAAATGTCCATTGAAGAGTTAAAATGAGAGTTTTAGCAGAAACAACTATTGGACAAGTTACGTATGCTTGTTTGTCATTGTCATCTTCCAATTTATATCACTGCAATCCTTACTTTGGGTTGTGGTCATTTATTCACATGATCAAACTTGCTTATTGGCTTGCATGCTTAATTACCTGTCCTGCTGCATGGTCCACATCAAAGTTACAGCGAGATATATGTGTATGTTATCATAAGATAACATGAACAATTTCTCAATTAGATTATGTGCATCCTGGAGACAAAAATAGTAAAAAGAACAAAATTCATAGATATAAGTATACAGAAAAATATATTAGGGAGCTAACCCCTTCAAAAGCTGTATGTAGCTTATCATTTATGTGGAGCTGTGATCTTTTTTTTTGTCTTCTTTCATGTTCGTGCTAATTTGGCTAATATCAAGTTGTATATTTGTGTCCTGAAAATTCTTCATGAGATCCAGAATCAATATAACAAAATTGTTCTGTTACCTTGTGTAAATGGTATAAAATCTTTTCCATGGAAGTGATATCTCTTATAGCTAATCCTTTTTCTAATTGTGCTCAGGGAGTGATGAAAAGGCATAACTTTAAAGGAATGCCGGCGTCCCATGGAGCATCACTATCCCATAGAAGCGGTGGTTCTACAGGTCAGAGGGATGCTCCTGGAAAGGTGTGTTTATCTTTCCATGGTGGTATTCATTTTTACGATTGAGCGGTGTTTTGGTTCTTAATTGTACTTTAGAGCTACCTGGAACTCACATTTGAGATAGTATATGCTGTAGCCTACTAGGTCGCTTCTGATTCTCGGATAATTCCACCCTGGACAGTTTACAGATTTAACTCTGCTTGTGAAATGAATTATATCGAGTAACATGTGGAAATTTTCATGGCTTACAATCTTGAAAATAGTGTTCTTTTTGTTGTTGCCTTATTTTTGGTGAAGCTTTAATGTTTATGAAGTTTGAAAAGGCTTATACTTGTGAATCCTCTTTCACATATCGACCTTATCTTCTACAGTTCCGTGATTCAATAGAAAATACTTTGAATTTTGTCTGATTTGCTTTGCATATGGAACCGTGGAAACTTTTGTATCAAATTTTAGAAGCTTGTTCCTGTTTCTAAATACAGAAAAAAGCAAGTTCCAAAGTGTGTAATATCTTTTTATGATCTGTTGATGGCGAGTTCTAGTCTGTTTTCATTGTATTCCATGTAATTTATGATAGCGAGAAACACATGCTTATTTTGCAGGTCTTCAAAGGTAGAAAGATGGCTGGGCGAATGGGTGGAAAGCAGAGAACTGTAAAAAATGTGTGGATATACAAAATTGATCCTGCAAGAAACTTGATATGGGTGAGAGGACAAGTAAGTTTCTTCTAAAACCAAATTTCAAACTCTTGATCTGATCCTATACTAGAGTCCTTGTTATATACATAAATATCATATACTCGGACATCATGGCCTGAGGTTTTTGCTGCGCACAACTCCACCTTTTTTTAGGTCCCCGGTGCCGAAGGAAACTTTGTATTTATAAAGGATGCCTTCTACAAGAAACTCAATAAGTCAATCCTTCCGTTCCCAACGTACTTTGCAACCGATGACGAGGACATGGAGAATTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGTTGGAGATTGATTAGGAGTTGCCCTTCAGAGCAAGTTGTGGTATTTGCTCTGCTTTTTTCTTCTATTGATGGTGTTTGCAGGTACGCTTATTGACAACCCTTATGAGAAGTCAATTCATTAGAAATGCAGTCAGAGGATCTGTACGAGGTGATCCGATCTCCTAATGAGATGGTAATCTATTGTTACTTTTTTCTTTTTAAAATTTTTCTCACCATCTCAAACCTGTACCGGAAAAGACCATTTCGAAATAAAGAGTAGAAAAAAAAAAAAAGAAGCTATGATTATTGAGAATTTTTTGTTGAGTGATCATATGATTTATTTTGGGAGTTGAAGTTAATGTTTTATGTGAACTTAGAAGAAGAGATTGTTCATGGCTCTGCCAATAGTGTTAGAAATTTCTCCTCTTTTGGGCTGAAGTGCCTAACCTCCTTTTTCCTTTTATTATTTGTAATGTAATTCCTTTGCATTTAGAATTTGGAATTGTGATCGGTTCTATAAACAATGTTTGACTCCTGTTCAAAGATGTGTGGTCGAGGGATTCAATCTTCTGACCAAAGTCA

mRNA sequence

AAATTGGAAACTACCTTCTTTTCCCAATTAACTTTCAAAACAACCTCTATCTAAATAATCCGTCGGGAAGGTTATTAACTTTTTATTTATTTATAAATTTATAAATTATAATTTTTTTTAATGTCTTTGATTTTGCTTTCTTAGAACCCTAAACCCCGAGTTGTCACTTGCTGCCGCTCTCTCTCCATCACACTGCATCGATGGCATAACACAGAGAGAAAGATAATGAAATTTCAGTCTCCGAGATCGAAATCAACCCTAAAATCTGAATCAAATCCTTCTTCTTCCTCTTTGATTTTTCCCCATTTCATATCGTAATTGTTGCGATTGGTTCTCACCATGTCGGCTTTATCCAGAGGTCTCATTTCTCGTTTTCGTCTTCTCTCGATCAATTCCGGCGCTTCTCATACAATTACTTCTTCTTCTTCTTCAAGGACAAATGCGTCTTGTTACTATTTCTTCCGCGCTTTCAGTACCCAAGATTTGATCCAGGCCAGCGATGGGTCTTTGCCATCTTCTTCGATTATTGAAGCTAAACCTCGTGTTATGACTCCAAACTCGAAGCGGACGGGTGTTATCGCCGTCAAGTGTGGAATGACGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCATCACTGTGCTCTGGGTTGATGATAATATTGTGTCTCAGGTCAAGACCATTGAGAAAGAGGGTATCACAGCCCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCTGAGGTAGGTCATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAACTGAGGGAGTTCCCGGTGTCAGAAGATGCACTTCTTCCAGTTGGTACAGCAATTGGCGTTCGTCATTTTGTTCCTGGACAGTATGTTGATGTGACAGGAATAAGTAGAGGGAAAGGTTTTCAGGGAGTGATGAAAAGGCATAACTTTAAAGGAATGCCGGCGTCCCATGGAGCATCACTATCCCATAGAAGCGGTGGTTCTACAGGTCAGAGGGATGCTCCTGGAAAGGTCTTCAAAGGTAGAAAGATGGCTGGGCGAATGGGTGGAAAGCAGAGAACTGTAAAAAATGTGTGGATATACAAAATTGATCCTGCAAGAAACTTGATATGGGTGAGAGGACAAGTCCCCGGTGCCGAAGGAAACTTTGTATTTATAAAGGATGCCTTCTACAAGAAACTCAATAAGTCAATCCTTCCGTTCCCAACGTACTTTGCAACCGATGACGAGGACATGGAGAATTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGTTGGAGATTGATTAGGAGTTGCCCTTCAGAGCAAGTTGTGGTATTTGCTCTGCTTTTTTCTTCTATTGATGGTGTTTGCAGGTACGCTTATTGACAACCCTTATGAGAAGTCAATTCATTAGAAATGCAGTCAGAGGATCTGTACGAGGTGATCCGATCTCCTAATGAGATGGTAATCTATTGTTACTTTTTTCTTTTTAAAATTTTTCTCACCATCTCAAACCTGTACCGGAAAAGACCATTTCGAAATAAAGAGTAGAAAAAAAAAAAAAGAAGCTATGATTATTGAGAATTTTTTGTTGAGTGATCATATGATTTATTTTGGGAGTTGAAGTTAATGTTTTATGTGAACTTAGAAGAAGAGATTGTTCATGGCTCTGCCAATAGTGTTAGAAATTTCTCCTCTTTTGGGCTGAAGTGCCTAACCTCCTTTTTCCTTTTATTATTTGTAATGTAATTCCTTTGCATTTAGAATTTGGAATTGTGATCGGTTCTATAAACAATGTTTGACTCCTGTTCAAAGATGTGTGGTCGAGGGATTCAATCTTCTGACCAAAGTCA

Coding sequence (CDS)

ATGTCGGCTTTATCCAGAGGTCTCATTTCTCGTTTTCGTCTTCTCTCGATCAATTCCGGCGCTTCTCATACAATTACTTCTTCTTCTTCTTCAAGGACAAATGCGTCTTGTTACTATTTCTTCCGCGCTTTCAGTACCCAAGATTTGATCCAGGCCAGCGATGGGTCTTTGCCATCTTCTTCGATTATTGAAGCTAAACCTCGTGTTATGACTCCAAACTCGAAGCGGACGGGTGTTATCGCCGTCAAGTGTGGAATGACGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCATCACTGTGCTCTGGGTTGATGATAATATTGTGTCTCAGGTCAAGACCATTGAGAAAGAGGGTATCACAGCCCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCTGAGGTAGGTCATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAACTGAGGGAGTTCCCGGTGTCAGAAGATGCACTTCTTCCAGTTGGTACAGCAATTGGCGTTCGTCATTTTGTTCCTGGACAGTATGTTGATGTGACAGGAATAAGTAGAGGGAAAGGTTTTCAGGGAGTGATGAAAAGGCATAACTTTAAAGGAATGCCGGCGTCCCATGGAGCATCACTATCCCATAGAAGCGGTGGTTCTACAGGTCAGAGGGATGCTCCTGGAAAGGTCTTCAAAGGTAGAAAGATGGCTGGGCGAATGGGTGGAAAGCAGAGAACTGTAAAAAATGTGTGGATATACAAAATTGATCCTGCAAGAAACTTGATATGGGTGAGAGGACAAGTCCCCGGTGCCGAAGGAAACTTTGTATTTATAAAGGATGCCTTCTACAAGAAACTCAATAAGTCAATCCTTCCGTTCCCAACGTACTTTGCAACCGATGACGAGGACATGGAGAATTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGTTGGAGATTGA

Protein sequence

MSALSRGLISRFRLLSINSGASHTITSSSSSRTNASCYYFFRAFSTQDLIQASDGSLPSSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFATDDEDMENLEPLVADLGEVDPFMVGD

Homology

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BLAST of Bhi01G000820 vs. TAIR 10
Match: AT3G17465.1 (ribosomal protein L3 plastid )

HSP 1 Score: 470.7 bits (1210), Expect = 9.5e-133
Identity = 242/328 (73.78%), Postives = 269/328 (82.01%), Query Frame = 0


Query: 1   MSALSRGLISRF-RLLSINSGASHTITSSSSSRTNASCYYFFRAFSTQDLIQASDGS--- 60
           M+A+ RGL+SR  + LSI S       SSS S  + S ++  R FS+   +    GS   
Sbjct: 1   MAAVPRGLLSRINQFLSIRS----ITPSSSESLPHCSSFFLIRRFSSDTGLMDGGGSDII 60

Query: 61  LPSSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIE 120
              + IIEAK   M+  SKRTG+IAVKCGMTALWDKWG RIPI++LWVDDNIVSQVKT+E
Sbjct: 61  GAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVE 120

Query: 121 KEGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHF 180
           KEGI ALQIGCGQKK KHL+K  VGHFRAQGVPLKRKLREFPV+EDALLPVGT++GVRHF
Sbjct: 121 KEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRHF 180

Query: 181 VPGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 240
           VPGQYVDVTGI+RGKGFQG MKRH F GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM
Sbjct: 181 VPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 240

Query: 241 AGRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTY 300
           AGRMG  QRTVKNVW+YKIDPARNL+WVRGQVPGAEGNFVFIKDA+ KK + S LPFPTY
Sbjct: 241 AGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPFPTY 300

Query: 301 FATDDEDMENLEPLVADLGEVDPFMVGD 325
            A +DED   LEPLVADLGEVDPFM+ +
Sbjct: 301 LAPEDEDPSELEPLVADLGEVDPFMLAE 324

[Close]

BLAST of Bhi01G000820 vs. TAIR 10
Match: AT2G43030.1 (Ribosomal protein L3 family protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-36
Identity = 88/229 (38.43%), Postives = 135/229 (58.95%), Query Frame = 0


Query: 59  SSSIIEAKPR----VMTPNSKRTGVIAVKCGMTALWDKWGARIPITVL-WVDDNIVSQVK 118
           SS +I++ P+    V +      GV+  K GM + +++ G  +P+TV+ + + NIV+Q+K
Sbjct: 34  SSLLIKSSPKTRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIK 93

Query: 119 TIEKEGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSE-DALLPVGTAIG 178
           T+  +G  A+QIG  + + K LTKPE GH +  G    R L+EF ++  +   P    + 
Sbjct: 94  TLATDGYDAVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVF 153

Query: 179 VRHFVPGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFK 238
              F  G  VDV G + GKGFQG +KRH+FK    +HG S SHR+ GS G    PG+V+K
Sbjct: 154 DEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYK 213

Query: 239 GRKMAGRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDA 282
           G+KM GRMGG +  ++ + I K+D   N++ ++G +PG  GN + I  A
Sbjct: 214 GKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPA 261

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BLAST of Bhi01G000820 vs. ExPASy Swiss-Prot
Match: Q9LRN8 (50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL3B PE=1 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.3e-131
Identity = 242/328 (73.78%), Postives = 269/328 (82.01%), Query Frame = 0


Query: 1   MSALSRGLISRF-RLLSINSGASHTITSSSSSRTNASCYYFFRAFSTQDLIQASDGS--- 60
           M+A+ RGL+SR  + LSI S       SSS S  + S ++  R FS+   +    GS   
Sbjct: 1   MAAVPRGLLSRINQFLSIRS----ITPSSSESLPHCSSFFLIRRFSSDTGLMDGGGSDII 60

Query: 61  LPSSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIE 120
              + IIEAK   M+  SKRTG+IAVKCGMTALWDKWG RIPI++LWVDDNIVSQVKT+E
Sbjct: 61  GAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVE 120

Query: 121 KEGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHF 180
           KEGI ALQIGCGQKK KHL+K  VGHFRAQGVPLKRKLREFPV+EDALLPVGT++GVRHF
Sbjct: 121 KEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRHF 180

Query: 181 VPGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 240
           VPGQYVDVTGI+RGKGFQG MKRH F GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM
Sbjct: 181 VPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 240

Query: 241 AGRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTY 300
           AGRMG  QRTVKNVW+YKIDPARNL+WVRGQVPGAEGNFVFIKDA+ KK + S LPFPTY
Sbjct: 241 AGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPFPTY 300

Query: 301 FATDDEDMENLEPLVADLGEVDPFMVGD 325
            A +DED   LEPLVADLGEVDPFM+ +
Sbjct: 301 LAPEDEDPSELEPLVADLGEVDPFMLAE 324

[Close]

BLAST of Bhi01G000820 vs. ExPASy Swiss-Prot
Match: Q5FTY3 (50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rplC PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.4e-59
Identity = 121/219 (55.25%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 76  RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 135
           RTG+IA K GMT L+ + G  +P+TVL +D+  V   +T E++G TA+Q+G G  K K++
Sbjct: 2   RTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKNV 61

Query: 136 TKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQYVDVTGISRGKGFQG 195
           TK   GHF    V  KR L EF VSEDALL  GT +   HFV GQ VDVTG S+GKGF G
Sbjct: 62  TKANRGHFARTKVEPKRHLAEFRVSEDALLEAGTKLSAAHFVVGQKVDVTGQSKGKGFAG 121

Query: 196 VMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 255
           VMKRHNF G+ ASHG S+SHRS GSTGQR  PGKVFKG+KMAG MG ++ T  N+ I  +
Sbjct: 122 VMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIAAV 181

Query: 256 DPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFP 295
           D  RNLI VRG +PGA+   V I+DA  KK   +  P+P
Sbjct: 182 DEERNLIMVRGAIPGAKNGLVLIRDAI-KKARHADAPYP 219

[Close]

BLAST of Bhi01G000820 vs. ExPASy Swiss-Prot
Match: Q5NQ64 (50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=rplC PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.7e-57
Identity = 117/238 (49.16%), Postives = 158/238 (66.39%), Query Frame = 0


Query: 76  RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 135
           RTGVIA K GMT L+ + G  +P+TVL ++D  V  VK  +++G  A+Q+G G  KAK++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKNV 61

Query: 136 TKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQYVDVTGISRGKGFQG 195
           TKP  GHF    V LK KL EFPVSEDA+L VGT+I   HF+ GQ VD++G ++GKGF G
Sbjct: 62  TKPVRGHFAKAEVELKAKLVEFPVSEDAVLEVGTSISADHFIAGQLVDISGQTQGKGFAG 121

Query: 196 VMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 255
            MKR  F G+ A+HG SLSHRS GSTG R  PG+VFK +KMAG MG +QRT +N+ +   
Sbjct: 122 AMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVIST 181

Query: 256 DPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFATDDEDMENLEPLVAD 314
           D  R+LI+VRG VPG++G ++ I+DA  K    +  P+P      + +     P+ A+
Sbjct: 182 DAERDLIFVRGSVPGSKGAWLIIRDA-VKVARPTDAPYPAAIKAANGNEAPAAPVAAE 238

[Close]

BLAST of Bhi01G000820 vs. ExPASy Swiss-Prot
Match: Q5LLU6 (50S ribosomal protein L3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=rplC PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.7e-57
Identity = 117/219 (53.42%), Postives = 150/219 (68.49%), Query Frame = 0


Query: 76  RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 135
           R+G+IA K GMT L+ + G +IP+TVL +D+  V   +T EK+G TA+Q+G G  K K +
Sbjct: 2   RSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKRV 61

Query: 136 TKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQYVDVTGISRGKGFQG 195
           +K   GHF AQ V  KRKL EF VSEDAL+ VG  I   HF+ GQ VDV+G S GKGF G
Sbjct: 62  SKAMRGHFAAQKVEPKRKLAEFRVSEDALIEVGAEISAEHFLTGQKVDVSGTSIGKGFAG 121

Query: 196 VMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 255
            MKRHNF G+ ASHG S+SHRS GSTGQ   PG+VFKG+KMAG MG  + T +N+ + K 
Sbjct: 122 AMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVVKT 181

Query: 256 DPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFP 295
           D  R L++++G VPG +  +V +KDA  KK  +  LPFP
Sbjct: 182 DAERGLVFIKGAVPGPKSGWVTVKDAVKKKAPEG-LPFP 219

[Close]

BLAST of Bhi01G000820 vs. ExPASy Swiss-Prot
Match: Q2G8Y0 (50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=rplC PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.3e-57
Identity = 110/219 (50.23%), Postives = 153/219 (69.86%), Query Frame = 0


Query: 76  RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 135
           RTGVIA K GMT L+ + G  +P+TVL +++  V  V+T E++G  ALQ+G G+ K K++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKNV 61

Query: 136 TKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQYVDVTGISRGKGFQG 195
            KP+  HF    VPLK ++ EF V++DALL VG+ I   HFVPGQYVD+TG ++GKGFQG
Sbjct: 62  AKPQREHFAKAEVPLKMEVAEFRVADDALLDVGSTIAASHFVPGQYVDITGQTQGKGFQG 121

Query: 196 VMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 255
            MKR  F GM A+HG S+SHR+ GSTG R  PG+VFK +KMAG MG +QRT +N+ + + 
Sbjct: 122 AMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVVRT 181

Query: 256 DPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFP 295
           D  R LI+V+G VPG++  ++ ++DA  K    +  P+P
Sbjct: 182 DDERGLIFVKGSVPGSKNAWLLVRDA-VKVSRHAEAPYP 219

[Close]

BLAST of Bhi01G000820 vs. NCBI nr
Match: XP_038881747.1 (50S ribosomal protein L3-2, mitochondrial [Benincasa hispida])

HSP 1 Score: 648.7 bits (1672), Expect = 2.7e-182
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTITSSSSSRTNASCYYFFRAFSTQDLIQASDGSLPSS 60
           MSALSRGLISRFRLLSINSGASHTITSSSSSRTNASCYYFFRAFSTQDLIQASDGSLPSS
Sbjct: 1   MSALSRGLISRFRLLSINSGASHTITSSSSSRTNASCYYFFRAFSTQDLIQASDGSLPSS 60

Query: 61  SIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI 120
           SIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI
Sbjct: 61  SIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI 120

Query: 121 TALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQ 180
           TALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQ
Sbjct: 121 TALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQ 180

Query: 181 YVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 240
           YVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM
Sbjct: 181 YVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 240

Query: 241 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFATD 300
           GGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFATD
Sbjct: 241 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFATD 300

Query: 301 DEDMENLEPLVADLGEVDPFMVGD 325
           DEDMENLEPLVADLGEVDPFMVGD
Sbjct: 301 DEDMENLEPLVADLGEVDPFMVGD 324

[Close]

BLAST of Bhi01G000820 vs. NCBI nr
Match: XP_008438999.1 (PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis melo] >ADN34039.1 50S ribosomal protein l3 [Cucumis melo subsp. melo])

HSP 1 Score: 589.0 bits (1517), Expect = 2.6e-164
Identity = 294/328 (89.63%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTITS---SSSSRTNASCYYFFRAFSTQDLIQASDGSL 60
           MSALSRGLISR RLLSINSGASH++TS   SSSSRTNASCYYFFRAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PSSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           P+SSIIEAKP  M+ NS+RTGVIAVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFV 180
           EGITALQIGCGQKK KHL+KPE+GHFRAQGVPLKRKL+EFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGISRGKGFQGVMKRH FKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKS-ILPFPTY 300
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PGAEG+FVFIKDA YK+LNKS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATDDEDMENLEPLVADLGEVDPFMVGD 325
           FATD ED + LEPLVADLGEVDPFM+GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 328

[Close]

BLAST of Bhi01G000820 vs. NCBI nr
Match: XP_022138212.1 (50S ribosomal protein L3-2, chloroplastic [Momordica charantia])

HSP 1 Score: 586.6 bits (1511), Expect = 1.3e-163
Identity = 293/324 (90.43%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTITSSSSSRTNASCYYFFRAFSTQDLIQASDGSLPSS 60
           MSALSRGL+SRFRLLSINSGAS TI S SSSRT+ SCYYFFR+FS++DLIQA D S PSS
Sbjct: 1   MSALSRGLVSRFRLLSINSGASSTI-SPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSS 60

Query: 61  SIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI 120
            IIEAKP VM PNSKRTGVIAVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI
Sbjct: 61  PIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI 120

Query: 121 TALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQ 180
           TALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPVS DALLPVGT IGVRHFVPGQ
Sbjct: 121 TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQ 180

Query: 181 YVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 240
           YVDVTGI+RGKGFQGVMKRH FKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KM GRM
Sbjct: 181 YVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRM 240

Query: 241 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFATD 300
           GGKQRTVKNVW+YKIDPARNLIWV+GQVPGAEGNFVFIKDAFYKK +KSILPFPTYFAT+
Sbjct: 241 GGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATE 300

Query: 301 DEDMENLEPLVADLGEVDPFMVGD 325
           DED E LEPLVADLGEVDPFMVGD
Sbjct: 301 DEDSEKLEPLVADLGEVDPFMVGD 323

[Close]

BLAST of Bhi01G000820 vs. NCBI nr
Match: XP_004147630.1 (50S ribosomal protein L3-2, mitochondrial [Cucumis sativus] >KGN57206.1 hypothetical protein Csa_010606 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 2.8e-163
Identity = 296/328 (90.24%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTIT---SSSSSRTNASCYYFFRAFSTQDLIQASDGSL 60
           MSALSRGLISRFRLLSINS ASH+IT   SSSSSRTNASCYYFFRAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRFRLLSINSSASHSITTSSSSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PSSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
            +SSI EAKP  M  NS RTGVIAVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  SASSIFEAKPGTMGSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFV 180
           EGITALQIGCGQKK KHL+KPE+GHFRAQGVPLKRKLREFPVS+DALLPVGT IGVRHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGVRHFV 180

Query: 181 PGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGISRGKGFQGVMKRH FKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKS-ILPFPTY 300
           GRMGGKQRTVKNVWIYKIDPARNL+WV+G +PGAEGNFVFIKDA YKKLNKS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLMWVKGPIPGAEGNFVFIKDAVYKKLNKSAILPFPTY 300

Query: 301 FATDDEDMENLEPLVADLGEVDPFMVGD 325
           FATD ED + LEPLVADLGEVDPFM GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMTGD 328

[Close]

BLAST of Bhi01G000820 vs. NCBI nr
Match: XP_022972230.1 (50S ribosomal protein L3-2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 579.3 bits (1492), Expect = 2.0e-161
Identity = 291/326 (89.26%), Postives = 305/326 (93.56%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTITSSSSSR--TNASCYYFFRAFSTQDLIQASDGSLP 60
           MSALSRGLISRFRLLSINSGAS TITSSSSS   T+ SCY+FFR FST+  IQA DGS  
Sbjct: 1   MSALSRGLISRFRLLSINSGASPTITSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSSL 60

Query: 61  SSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKE 120
           SS IIEAK  VM+PNSKRTGVIAVKCGM+ALWDKWGAR+PITVLWVDDNIVSQVKTIEKE
Sbjct: 61  SSPIIEAKSGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEKE 120

Query: 121 GITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVP 180
           GITALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPVSEDALLPVGT IGVRHFVP
Sbjct: 121 GITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSEDALLPVGTTIGVRHFVP 180

Query: 181 GQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAG 240
           GQ+VDVTGI+RGKGFQGVMKRH FKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KMAG
Sbjct: 181 GQFVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMAG 240

Query: 241 RMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFA 300
           RMGGKQRTVKNVW+YKIDPARNL+WVRGQVPGAEGNFVFIKDAFYKK +KSILPFPTYFA
Sbjct: 241 RMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFA 300

Query: 301 TDDEDMENLEPLVADLGEVDPFMVGD 325
            DDED E LEPLVADLGEVDPFMVG+
Sbjct: 301 NDDEDTETLEPLVADLGEVDPFMVGE 326

[Close]

BLAST of Bhi01G000820 vs. ExPASy TrEMBL
Match: E5GC40 (50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 294/328 (89.63%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTITS---SSSSRTNASCYYFFRAFSTQDLIQASDGSL 60
           MSALSRGLISR RLLSINSGASH++TS   SSSSRTNASCYYFFRAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PSSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           P+SSIIEAKP  M+ NS+RTGVIAVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFV 180
           EGITALQIGCGQKK KHL+KPE+GHFRAQGVPLKRKL+EFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGISRGKGFQGVMKRH FKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKS-ILPFPTY 300
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PGAEG+FVFIKDA YK+LNKS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATDDEDMENLEPLVADLGEVDPFMVGD 325
           FATD ED + LEPLVADLGEVDPFM+GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 328

[Close]

BLAST of Bhi01G000820 vs. ExPASy TrEMBL
Match: A0A1S3AYD1 (50S ribosomal protein L3-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483925 PE=3 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 294/328 (89.63%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTITS---SSSSRTNASCYYFFRAFSTQDLIQASDGSL 60
           MSALSRGLISR RLLSINSGASH++TS   SSSSRTNASCYYFFRAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PSSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           P+SSIIEAKP  M+ NS+RTGVIAVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFV 180
           EGITALQIGCGQKK KHL+KPE+GHFRAQGVPLKRKL+EFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGISRGKGFQGVMKRH FKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKS-ILPFPTY 300
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PGAEG+FVFIKDA YK+LNKS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATDDEDMENLEPLVADLGEVDPFMVGD 325
           FATD ED + LEPLVADLGEVDPFM+GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 328

[Close]

BLAST of Bhi01G000820 vs. ExPASy TrEMBL
Match: A0A6J1CAF7 (50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009440 PE=3 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 6.2e-164
Identity = 293/324 (90.43%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTITSSSSSRTNASCYYFFRAFSTQDLIQASDGSLPSS 60
           MSALSRGL+SRFRLLSINSGAS TI S SSSRT+ SCYYFFR+FS++DLIQA D S PSS
Sbjct: 1   MSALSRGLVSRFRLLSINSGASSTI-SPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSS 60

Query: 61  SIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI 120
            IIEAKP VM PNSKRTGVIAVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI
Sbjct: 61  PIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI 120

Query: 121 TALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQ 180
           TALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPVS DALLPVGT IGVRHFVPGQ
Sbjct: 121 TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQ 180

Query: 181 YVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 240
           YVDVTGI+RGKGFQGVMKRH FKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KM GRM
Sbjct: 181 YVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRM 240

Query: 241 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFATD 300
           GGKQRTVKNVW+YKIDPARNLIWV+GQVPGAEGNFVFIKDAFYKK +KSILPFPTYFAT+
Sbjct: 241 GGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATE 300

Query: 301 DEDMENLEPLVADLGEVDPFMVGD 325
           DED E LEPLVADLGEVDPFMVGD
Sbjct: 301 DEDSEKLEPLVADLGEVDPFMVGD 323

[Close]

BLAST of Bhi01G000820 vs. ExPASy TrEMBL
Match: A0A0A0LAV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171140 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.4e-163
Identity = 296/328 (90.24%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTIT---SSSSSRTNASCYYFFRAFSTQDLIQASDGSL 60
           MSALSRGLISRFRLLSINS ASH+IT   SSSSSRTNASCYYFFRAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRFRLLSINSSASHSITTSSSSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PSSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
            +SSI EAKP  M  NS RTGVIAVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  SASSIFEAKPGTMGSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFV 180
           EGITALQIGCGQKK KHL+KPE+GHFRAQGVPLKRKLREFPVS+DALLPVGT IGVRHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGVRHFV 180

Query: 181 PGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGISRGKGFQGVMKRH FKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKS-ILPFPTY 300
           GRMGGKQRTVKNVWIYKIDPARNL+WV+G +PGAEGNFVFIKDA YKKLNKS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLMWVKGPIPGAEGNFVFIKDAVYKKLNKSAILPFPTY 300

Query: 301 FATDDEDMENLEPLVADLGEVDPFMVGD 325
           FATD ED + LEPLVADLGEVDPFM GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMTGD 328

[Close]

BLAST of Bhi01G000820 vs. ExPASy TrEMBL
Match: A0A6J1I7Y9 (50S ribosomal protein L3-2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470821 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 9.8e-162
Identity = 291/326 (89.26%), Postives = 305/326 (93.56%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSGASHTITSSSSSR--TNASCYYFFRAFSTQDLIQASDGSLP 60
           MSALSRGLISRFRLLSINSGAS TITSSSSS   T+ SCY+FFR FST+  IQA DGS  
Sbjct: 1   MSALSRGLISRFRLLSINSGASPTITSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSSL 60

Query: 61  SSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKE 120
           SS IIEAK  VM+PNSKRTGVIAVKCGM+ALWDKWGAR+PITVLWVDDNIVSQVKTIEKE
Sbjct: 61  SSPIIEAKSGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEKE 120

Query: 121 GITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVP 180
           GITALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPVSEDALLPVGT IGVRHFVP
Sbjct: 121 GITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSEDALLPVGTTIGVRHFVP 180

Query: 181 GQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAG 240
           GQ+VDVTGI+RGKGFQGVMKRH FKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KMAG
Sbjct: 181 GQFVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMAG 240

Query: 241 RMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFA 300
           RMGGKQRTVKNVW+YKIDPARNL+WVRGQVPGAEGNFVFIKDAFYKK +KSILPFPTYFA
Sbjct: 241 RMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFA 300

Query: 301 TDDEDMENLEPLVADLGEVDPFMVGD 325
            DDED E LEPLVADLGEVDPFMVG+
Sbjct: 301 NDDEDTETLEPLVADLGEVDPFMVGE 326

The following BLAST results are available for this feature:

BLAST of Bhi01G000820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17465.1	9.5e-133	73.78	ribosomal protein L3 plastid	[more]
AT2G43030.1	1.3e-36	38.43	Ribosomal protein L3 family protein	[more]

BLAST of Bhi01G000820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRN8	1.3e-131	73.78	50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL...	[more]
Q5FTY3	1.4e-59	55.25	50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpl...	[more]
Q5NQ64	1.7e-57	49.16	50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 ...	[more]
Q5LLU6	3.7e-57	53.42	50S ribosomal protein L3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / ...	[more]
Q2G8Y0	8.3e-57	50.23	50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 ...	[more]

BLAST of Bhi01G000820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881747.1	2.7e-182	100.00	50S ribosomal protein L3-2, mitochondrial [Benincasa hispida]	[more]
XP_008438999.1	2.6e-164	89.63	PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis melo] >ADN34039.1 ...	[more]
XP_022138212.1	1.3e-163	90.43	50S ribosomal protein L3-2, chloroplastic [Momordica charantia]	[more]
XP_004147630.1	2.8e-163	90.24	50S ribosomal protein L3-2, mitochondrial [Cucumis sativus] >KGN57206.1 hypothet...	[more]
XP_022972230.1	2.0e-161	89.26	50S ribosomal protein L3-2, chloroplastic [Cucurbita maxima]	[more]

BLAST of Bhi01G000820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GC40	1.2e-164	89.63	50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3AYD1	1.2e-164	89.63	50S ribosomal protein L3-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10348392...	[more]
A0A6J1CAF7	6.2e-164	90.43	50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0LAV0	1.4e-163	90.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171140 PE=3 SV=1	[more]
A0A6J1I7Y9	9.8e-162	89.26	50S ribosomal protein L3-2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 174..257 e-value: 7.0E-17 score: 61.4
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 203..285 e-value: 1.7E-24 score: 88.1
None	No IPR available	GENE3D	3.30.160.810		coord: 108..171 e-value: 1.0E-22 score: 82.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..229
None	No IPR available	PANTHER	PTHR11229:SF15	BNAA01G27990D PROTEIN	coord: 1..322
IPR019927	Ribosomal protein L3, bacterial/organelle-type	TIGRFAM	TIGR03625	TIGR03625	coord: 78..279 e-value: 5.9E-77 score: 256.0
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 1..322
IPR019927	Ribosomal protein L3, bacterial/organelle-type	HAMAP	MF_01325_B	Ribosomal_L3_B	coord: 76..282 score: 34.207462
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 176..199
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 67..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000820	Bhi01M000820	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome