Bhi01G000746 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G000746
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	small subunit processome component 20 homolog
Location	chr1: 19307101 .. 19308958 (-)
RNA-Seq Expression	Bhi01G000746
Synteny	Bhi01G000746

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATATATTTGGTGTCCCTAAAGAAAATTTGGAAAGCATAATTGGTGCCACCATAGGTTCTTACCTTAAATTGCTCTCTAGTGAAAAGGCTAGGCTTGAAGAATTAAATAGACTTGTGTATGTTGCCAAAAGATATAGCTCGTGTTCACAAGTCTTGGTAGCTGTAGCTGATTATTTGGATTTTATTTATGGGTAAGTTGGAAATTTTACATTCTAGACAATTTTTTCTACCTTCTAATCATTATTTCATCTCCAACCTTGGTTGTTGGAAGCATGTAGTATTCCCTTAACCGTGTTAATTGTAGGCCAGCGGTCAGCAAAAGATTCTATTCTGAAGAGTTTCAAGCAGATAAGGTTGAAGATGCTGTACAGGTGTTTGCAGATAATTTGCGTCACCCAGATAAGGGAGTTTGTATATCTACTCTCAGAATATTGTGTCACTATGAGCCTTTGCAGTCTGCCACCCTTACAAAAGACCCTTCAATTGATAACGAGATGGAAACTGAAAATTTGAAACAATATTCTGATGATTTAGTAGGCAGTGAGGTAAGTTTGTCCATGTTCCTTTATTTTCTCGTTTGACTTTGTGCTTTGGAGCTCTAAATTCACTCTCTAATTGTGTCAGGTCCTTCATCATTTTCTCACCATTGAATCAACCCCTACTTCAATATCTACAAGTAGAAGTATTATATTATTAATCTCTAGAGTGCAGATGGCCTTGTCGGCTAAAAGGATACCTGAGGCATACTTATTGGTTGCTTTAAATGGGATTATTGGCATTTTCCAAAACTGCTTTAGCTATATTTGGGATCAAGCATCTGATTGTCTTGCCTTTTTAATCAGAAGACTCTCGGGATTTCTGTGGGATAAACTAATATGTTATTTTCAGTAGTGGTTATTTCTACTTGATCAACCAGGCAGAGATACTGCTGAATCATCTGACGAACTAAATGGTGTGCTTGCACATGCCATTATGATTTTCTTTAGCTTCATAATTTCATTTAAAATAATGTGCTCCAATTTTAAAATGCATAGTTAAGTTCCTTGTTTCAGTAGAAGAGTTGTTTGTCATTTTATGGTTAAACAAACAGTTCTTTTTTTTTTTTTTTTTTCCGTATGTAAGAATTTTGCTTAATTAATACCGTTTCTCTATCTCCCACTACCCCCCCCCCCCCCCCCAAGGAAAAAAAAGGAAAAAAATACTTTTCTGTGCAATAAAAAAATATTTAAGTGCATTTGTAACATAAACATATGTGTTTATTGCTGTTAAACCATTTTCTATTATTTCAAACCTCAGGAAGATCAAAATATGGCTACACGTTTGACGAATACAATGTCCAAACTCGCTAAAGGAGGCCTTTTAGTACCATAAACATAAAGTATACGTGATAAATAGTTTCTATCTTTGGGAATTTCCTTATCATATGCTTTTTTCTTTTGGCAGGGTCGTATATTTCAAGGCAAAGAGCCACCCCAATTTATTGCCCTTTTTCAACCTTTTGTGGTGCTCAAGGTGGTAGTCTTATAAAGATTCTTTCTTAACTCATCTCTTTTGATTAGAATCATGTTGTAGTTTCTTTTACAAGGTTCTGATGTGGAACTGAGAGGGTCCTAGAGAGACACAGATAACTATCATTTTCTTAATGAACTCTGGTGTAGGGTGGCTTGAGCTCTAGTTACAAGAAACTCATAGTAGATAAAGCTTTGGCTAATGAAACTTACACGGAAGATTATGTTGCCCTTATTAGGATATCACAAACATCCATTCACAACAATAAAGCAGTGCAAGTTGGAGTTGTACGTAGTAGTGATTTTGATAATTTTCTTTCTATGTTAAGTGTGATTGATGCTTTTTAA

mRNA sequence

GCAATATATTTGGTGTCCCTAAAGAAAATTTGGAAAGCATAATTGGTGCCACCATAGGTTCTTACCTTAAATTGCTCTCTAGTGAAAAGGCTAGGCTTGAAGAATTAAATAGACTTGTGTATGTTGCCAAAAGATATAGCTCGTGTTCACAAGTCTTGGTAGCTGTAGCTGATTATTTGGATTTTATTTATGGGCCAGCGGTCAGCAAAAGATTCTATTCTGAAGAGTTTCAAGCAGATAAGGTTGAAGATGCTGTACAGGTGTTTGCAGATAATTTGCGTCACCCAGATAAGGGAGTTTGTATATCTACTCTCAGAATATTGTGTCACTATGAGCCTTTGCAGTCTGCCACCCTTACAAAAGACCCTTCAATTGATAACGAGATGGAAACTGAAAATTTGAAACAATATTCTGATGATTTAGTAGGCAGTGAGGGTCGTATATTTCAAGGCAAAGAGCCACCCCAATTTATTGCCCTTTTTCAACCTTTTGTGGTGCTCAAGGGTGGCTTGAGCTCTAGTTACAAGAAACTCATAGTAGATAAAGCTTTGGCTAATGAAACTTACACGGAAGATTATGTTGCCCTTATTAGGATATCACAAACATCCATTCACAACAATAAAGCAGTGCAAGTTGGAGTTGTACGTAGTAGTGATTTTGATAATTTTCTTTCTATGTTAAGTGTGATTGATGCTTTTTAA

Coding sequence (CDS)

GCAATATATTTGGTGTCCCTAAAGAAAATTTGGAAAGCATAATTGGTGCCACCATAGGTTCTTACCTTAAATTGCTCTCTAGTGAAAAGGCTAGGCTTGAAGAATTAAATAGACTTGTGTATGTTGCCAAAAGATATAGCTCGTGTTCACAAGTCTTGGTAGCTGTAGCTGATTATTTGGATTTTATTTATGGGCCAGCGGTCAGCAAAAGATTCTATTCTGAAGAGTTTCAAGCAGATAAGGTTGAAGATGCTGTACAGGTGTTTGCAGATAATTTGCGTCACCCAGATAAGGGAGTTTGTATATCTACTCTCAGAATATTGTGTCACTATGAGCCTTTGCAGTCTGCCACCCTTACAAAAGACCCTTCAATTGATAACGAGATGGAAACTGAAAATTTGAAACAATATTCTGATGATTTAGTAGGCAGTGAGGGTCGTATATTTCAAGGCAAAGAGCCACCCCAATTTATTGCCCTTTTTCAACCTTTTGTGGTGCTCAAGGGTGGCTTGAGCTCTAGTTACAAGAAACTCATAGTAGATAAAGCTTTGGCTAATGAAACTTACACGGAAGATTATGTTGCCCTTATTAGGATATCACAAACATCCATTCACAACAATAAAGCAGTGCAAGTTGGAGTTGTACGTAGTAGTGATTTTGATAATTTTCTTTCTATGTTAAGTGTGATTGATGCTTTTTAA

Protein sequence

NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLDFIYGPAVSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSATLTKDPSIDNEMETENLKQYSDDLVGSEGRIFQGKEPPQFIALFQPFVVLKGGLSSSYKKLIVDKALANETYTEDYVALIRISQTSIHNNKAVQVGVVRSSDFDNFLSMLSVIDAF

Homology

[Close]

BLAST of Bhi01G000746 vs. TAIR 10
Match: AT2G41740.1 (villin 2 )

HSP 1 Score: 95.9 bits (237), Expect = 4.5e-20
Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 144 EGRIFQGKEPPQFIALFQPFVVLKGGLSSSYKKLIVDKALANETYTEDYVALIRISQTSI 203
           +GRI++GKEPPQF+ALFQP VVLKGGLSS YK  + +    +ETYT + +AL+++S T +
Sbjct: 469 QGRIYEGKEPPQFVALFQPMVVLKGGLSSGYKSSMGESESTDETYTPESIALVQVSGTGV 528

Query: 204 HNNKAVQVGVVRSS 218
           HNNKAVQV  V +S
Sbjct: 529 HNNKAVQVETVATS 542

[Close]

BLAST of Bhi01G000746 vs. TAIR 10
Match: AT3G57410.1 (villin 3 )

HSP 1 Score: 94.7 bits (234), Expect = 1.0e-19
Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 144 EGRIFQGKEPPQFIALFQPFVVLKGGLSSSYKKLIVDKALANETYTEDYVALIRISQTSI 203
           + RIF+GKEPPQF+ALFQ  VVLKGGLSS YK  + +K  + ETYT + +ALI++S T +
Sbjct: 471 QARIFEGKEPPQFVALFQHMVVLKGGLSSGYKNSMTEKGSSGETYTPESIALIQVSGTGV 530

Query: 204 HNNKAVQVGVVRSS--DFDNFL 224
           HNNKA+QV  V +S   +D FL
Sbjct: 531 HNNKALQVEAVATSLNSYDCFL 552

[Close]

BLAST of Bhi01G000746 vs. TAIR 10
Match: AT4G30990.1 (ARM repeat superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.3e-18
Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 0


Query: 6   PKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLDFIYGP 65
           P+   +S++G T+ S  K+     + LEE    +  AK Y SC QVL  VAD L+F++ P
Sbjct: 555 PELMWQSLLGTTLRSCYKMTGINHSDLEE---ALSFAKDYKSCEQVLSPVADVLEFMHRP 614

Query: 66  AV----SKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSATLTKD 125
           A+    SK +   E QA+K  DA ++F++NLRHP+K + + TLRILCH+E     TL+ D
Sbjct: 615 ALAHGRSKPY--PELQANKAGDAFEIFSENLRHPNKNIRLMTLRILCHFE-----TLSSD 674

Query: 126 PSIDNEMETENLK 135
           PS +     + +K
Sbjct: 675 PSFEEHPPKKKMK 677

[Close]

BLAST of Bhi01G000746 vs. TAIR 10
Match: AT4G30990.2 (ARM repeat superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.3e-18
Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 0


Query: 6   PKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLDFIYGP 65
           P+   +S++G T+ S  K+     + LEE    +  AK Y SC QVL  VAD L+F++ P
Sbjct: 555 PELMWQSLLGTTLRSCYKMTGINHSDLEE---ALSFAKDYKSCEQVLSPVADVLEFMHRP 614

Query: 66  AV----SKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSATLTKD 125
           A+    SK +   E QA+K  DA ++F++NLRHP+K + + TLRILCH+E     TL+ D
Sbjct: 615 ALAHGRSKPY--PELQANKAGDAFEIFSENLRHPNKNIRLMTLRILCHFE-----TLSSD 674

Query: 126 PSIDNEMETENLK 135
           PS +     + +K
Sbjct: 675 PSFEEHPPKKKMK 677

[Close]

BLAST of Bhi01G000746 vs. TAIR 10
Match: AT4G30160.1 (villin 4 )

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 141 VGSEGRIFQGKEPPQFIALFQPFVVLKGGLSSSYKKLIVDKALANETYTEDYVALIRISQ 200
           V ++ RI++GKEP QF  + Q F+V KGG+SS YKK I +K + ++TY E+ VAL RI  
Sbjct: 467 VPAQARIYEGKEPIQFFVIMQSFIVFKGGISSGYKKYIAEKEVDDDTYNENGVALFRIQG 526

Query: 201 TSIHNNKAVQVGVVRSS 218
           +   N +A+QV  V +S
Sbjct: 527 SGPENMQAIQVDPVAAS 543

[Close]

BLAST of Bhi01G000746 vs. ExPASy Swiss-Prot
Match: Q10L71 (Villin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN2 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.8e-21
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 125 DNEMETENLKQYSDDLVGSE--GRIFQGKEPPQFIALFQPFVVLKGGLSSSYKKLIVDKA 184
           D EM  +      + L G    GRI+QGKEPPQFIALFQP V+LKGG+SS Y+K + +K 
Sbjct: 453 DQEMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIALFQPMVILKGGISSGYQKFVEEKG 512

Query: 185 LANETYTEDYVALIRISQTSIHNNKAVQVGVVRSS 218
           L +ETY+ D +AL RIS TSIHNNK +QV  V S+
Sbjct: 513 LKDETYSGDGIALFRISGTSIHNNKVLQVDAVSSN 547

[Close]

BLAST of Bhi01G000746 vs. ExPASy Swiss-Prot
Match: O81644 (Villin-2 OS=Arabidopsis thaliana OX=3702 GN=VLN2 PE=1 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 6.4e-19
Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 144 EGRIFQGKEPPQFIALFQPFVVLKGGLSSSYKKLIVDKALANETYTEDYVALIRISQTSI 203
           +GRI++GKEPPQF+ALFQP VVLKGGLSS YK  + +    +ETYT + +AL+++S T +
Sbjct: 469 QGRIYEGKEPPQFVALFQPMVVLKGGLSSGYKSSMGESESTDETYTPESIALVQVSGTGV 528

Query: 204 HNNKAVQVGVVRSS 218
           HNNKAVQV  V +S
Sbjct: 529 HNNKAVQVETVATS 542

[Close]

BLAST of Bhi01G000746 vs. ExPASy Swiss-Prot
Match: O81645 (Villin-3 OS=Arabidopsis thaliana OX=3702 GN=VLN3 PE=1 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 144 EGRIFQGKEPPQFIALFQPFVVLKGGLSSSYKKLIVDKALANETYTEDYVALIRISQTSI 203
           + RIF+GKEPPQF+ALFQ  VVLKGGLSS YK  + +K  + ETYT + +ALI++S T +
Sbjct: 471 QARIFEGKEPPQFVALFQHMVVLKGGLSSGYKNSMTEKGSSGETYTPESIALIQVSGTGV 530

Query: 204 HNNKAVQVGVVRSS--DFDNFL 224
           HNNKA+QV  V +S   +D FL
Sbjct: 531 HNNKALQVEAVATSLNSYDCFL 552

[Close]

BLAST of Bhi01G000746 vs. ExPASy Swiss-Prot
Match: O65570 (Villin-4 OS=Arabidopsis thaliana OX=3702 GN=VLN4 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 141 VGSEGRIFQGKEPPQFIALFQPFVVLKGGLSSSYKKLIVDKALANETYTEDYVALIRISQ 200
           V ++ RI++GKEP QF  + Q F+V KGG+SS YKK I +K + ++TY E+ VAL RI  
Sbjct: 467 VPAQARIYEGKEPIQFFVIMQSFIVFKGGISSGYKKYIAEKEVDDDTYNENGVALFRIQG 526

Query: 201 TSIHNNKAVQVGVVRSS 218
           +   N +A+QV  V +S
Sbjct: 527 SGPENMQAIQVDPVAAS 543

[Close]

BLAST of Bhi01G000746 vs. ExPASy Swiss-Prot
Match: Q0J716 (Villin-5 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN5 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.8e-12
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 146 RIFQGKEPPQFIALFQPFVVLKGGLSSSYKKLIVDKALANETYTEDYVALIRISQTSIHN 205
           R+++GKEP QF  +FQ F V KGGLSS YKK I +  + ++TY ED +AL RI  +   N
Sbjct: 475 RLYEGKEPIQFFVIFQSFQVFKGGLSSGYKKFIAENGIDDDTYLEDGLALFRIQGSGPEN 534

Query: 206 NKAVQVGVVRSS 218
            +A+QV    SS
Sbjct: 535 MQAIQVDAAASS 546

[Close]

BLAST of Bhi01G000746 vs. NCBI nr
Match: XP_038874757.1 (LOW QUALITY PROTEIN: small subunit processome component 20 homolog [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 9.7e-65
Identity = 131/144 (90.97%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           +IFGVPKENLESIIGATIGSYLKLLSS+K  LEELNR VY+AKRYSSCSQVLVAVADYLD
Sbjct: 555 DIFGVPKENLESIIGATIGSYLKLLSSKKVGLEELNRFVYLAKRYSSCSQVLVAVADYLD 614

Query: 61  FIYGPAVSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSATLTK 120
           FIYGP VSKR YSEEFQADKVEDAVQVFADNLRHPDKGV ISTLRILCHYEPLQSATLTK
Sbjct: 615 FIYGPGVSKRSYSEEFQADKVEDAVQVFADNLRHPDKGVRISTLRILCHYEPLQSATLTK 674

Query: 121 DPSIDNEMETENLKQYSDDLVGSE 145
           DPSIDNEM+TENL+Q SDD VGSE
Sbjct: 675 DPSIDNEMKTENLEQCSDDSVGSE 698

[Close]

BLAST of Bhi01G000746 vs. NCBI nr
Match: XP_011649103.1 (small subunit processome component 20 homolog isoform X1 [Cucumis sativus] >KGN61498.1 hypothetical protein Csa_006532 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 5.9e-62
Identity = 128/148 (86.49%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           +IFG+PKE LESIIGATIGSYLKLLSSEKA LEEL+RLVY+AKRYSSCSQVLVAVADYLD
Sbjct: 555 DIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYSSCSQVLVAVADYLD 614

Query: 61  FIYGPA----VSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSA 120
           FIYGPA    +SKR YSEEFQADKVEDAVQVFADNLRH DKGV +STLRILCHYEPLQSA
Sbjct: 615 FIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCHYEPLQSA 674

Query: 121 TLTKDPSIDNEMETENLKQYSDDLVGSE 145
           TLTK+ SIDNEME ENL+ YSDDLVGSE
Sbjct: 675 TLTKESSIDNEMEAENLEPYSDDLVGSE 702

[Close]

BLAST of Bhi01G000746 vs. NCBI nr
Match: KAA0033350.1 (U3 small nucleolar RNA-associated protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 4.7e-59
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           +IFG+PKE LESIIGATIGSYLKLLSSEKA LEEL+RLVY+AKRYSSCSQVLVAVADYLD
Sbjct: 555 DIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYSSCSQVLVAVADYLD 614

Query: 61  FIYGPA----VSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSA 120
           FIYGPA    +SKR YSEEFQADKVEDAVQVFADNLRH DKGV +STLRILC YEPLQSA
Sbjct: 615 FIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCQYEPLQSA 674

Query: 121 TLTKDPSIDNEMETENLKQYSDDLVGSE 145
            L K+ SIDNEME EN   YSDDLVGSE
Sbjct: 675 NLAKESSIDNEMEAENFALYSDDLVGSE 702

[Close]

BLAST of Bhi01G000746 vs. NCBI nr
Match: TYK21558.1 (U3 small nucleolar RNA-associated protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 4.7e-59
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           +IFG+PKE LESIIGATIGSYLKLLSSEKA LEEL+RLVY+AKRYSSCSQVLVAVADYLD
Sbjct: 469 DIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYSSCSQVLVAVADYLD 528

Query: 61  FIYGPA----VSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSA 120
           FIYGPA    +SKR YSEEFQADKVEDAVQVFADNLRH DKGV +STLRILC YEPLQSA
Sbjct: 529 FIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCQYEPLQSA 588

Query: 121 TLTKDPSIDNEMETENLKQYSDDLVGSE 145
            L K+ SIDNEME EN   YSDDLVGSE
Sbjct: 589 NLAKESSIDNEMEAENFALYSDDLVGSE 616

[Close]

BLAST of Bhi01G000746 vs. NCBI nr
Match: XP_008457216.1 (PREDICTED: U3 small nucleolar RNA-associated protein 20 [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 4.7e-59
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           +IFG+PKE LESIIGATIGSYLKLLSSEKA LEEL+RLVY+AKRYSSCSQVLVAVADYLD
Sbjct: 558 DIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYSSCSQVLVAVADYLD 617

Query: 61  FIYGPA----VSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSA 120
           FIYGPA    +SKR YSEEFQADKVEDAVQVFADNLRH DKGV +STLRILC YEPLQSA
Sbjct: 618 FIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCQYEPLQSA 677

Query: 121 TLTKDPSIDNEMETENLKQYSDDLVGSE 145
            L K+ SIDNEME EN   YSDDLVGSE
Sbjct: 678 NLAKESSIDNEMEAENFALYSDDLVGSE 705

[Close]

BLAST of Bhi01G000746 vs. ExPASy TrEMBL
Match: A0A0A0LIC2 (DRIM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G148430 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.8e-62
Identity = 128/148 (86.49%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           +IFG+PKE LESIIGATIGSYLKLLSSEKA LEEL+RLVY+AKRYSSCSQVLVAVADYLD
Sbjct: 555 DIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYSSCSQVLVAVADYLD 614

Query: 61  FIYGPA----VSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSA 120
           FIYGPA    +SKR YSEEFQADKVEDAVQVFADNLRH DKGV +STLRILCHYEPLQSA
Sbjct: 615 FIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCHYEPLQSA 674

Query: 121 TLTKDPSIDNEMETENLKQYSDDLVGSE 145
           TLTK+ SIDNEME ENL+ YSDDLVGSE
Sbjct: 675 TLTKESSIDNEMEAENLEPYSDDLVGSE 702

[Close]

BLAST of Bhi01G000746 vs. ExPASy TrEMBL
Match: A0A5D3DDG1 (U3 small nucleolar RNA-associated protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00530 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.3e-59
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           +IFG+PKE LESIIGATIGSYLKLLSSEKA LEEL+RLVY+AKRYSSCSQVLVAVADYLD
Sbjct: 469 DIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYSSCSQVLVAVADYLD 528

Query: 61  FIYGPA----VSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSA 120
           FIYGPA    +SKR YSEEFQADKVEDAVQVFADNLRH DKGV +STLRILC YEPLQSA
Sbjct: 529 FIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCQYEPLQSA 588

Query: 121 TLTKDPSIDNEMETENLKQYSDDLVGSE 145
            L K+ SIDNEME EN   YSDDLVGSE
Sbjct: 589 NLAKESSIDNEMEAENFALYSDDLVGSE 616

[Close]

BLAST of Bhi01G000746 vs. ExPASy TrEMBL
Match: A0A5A7SR09 (U3 small nucleolar RNA-associated protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G001740 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.3e-59
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           +IFG+PKE LESIIGATIGSYLKLLSSEKA LEEL+RLVY+AKRYSSCSQVLVAVADYLD
Sbjct: 555 DIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYSSCSQVLVAVADYLD 614

Query: 61  FIYGPA----VSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSA 120
           FIYGPA    +SKR YSEEFQADKVEDAVQVFADNLRH DKGV +STLRILC YEPLQSA
Sbjct: 615 FIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCQYEPLQSA 674

Query: 121 TLTKDPSIDNEMETENLKQYSDDLVGSE 145
            L K+ SIDNEME EN   YSDDLVGSE
Sbjct: 675 NLAKESSIDNEMEAENFALYSDDLVGSE 702

[Close]

BLAST of Bhi01G000746 vs. ExPASy TrEMBL
Match: A0A1S3C531 (U3 small nucleolar RNA-associated protein 20 OS=Cucumis melo OX=3656 GN=LOC103496945 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.3e-59
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           +IFG+PKE LESIIGATIGSYLKLLSSEKA LEEL+RLVY+AKRYSSCSQVLVAVADYLD
Sbjct: 558 DIFGIPKEKLESIIGATIGSYLKLLSSEKAGLEELSRLVYLAKRYSSCSQVLVAVADYLD 617

Query: 61  FIYGPA----VSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSA 120
           FIYGPA    +SKR YSEEFQADKVEDAVQVFADNLRH DKGV +STLRILC YEPLQSA
Sbjct: 618 FIYGPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCQYEPLQSA 677

Query: 121 TLTKDPSIDNEMETENLKQYSDDLVGSE 145
            L K+ SIDNEME EN   YSDDLVGSE
Sbjct: 678 NLAKESSIDNEMEAENFALYSDDLVGSE 705

[Close]

BLAST of Bhi01G000746 vs. ExPASy TrEMBL
Match: A0A6J1KL31 (small subunit processome component 20 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494258 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 2.1e-57
Identity = 122/148 (82.43%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 1   NIFGVPKENLESIIGATIGSYLKLLSSEKARLEELNRLVYVAKRYSSCSQVLVAVADYLD 60
           NIFGVP+EN ES+IGATIGSYLKLLS EKA LEE  RLVY+AKRYSSCSQVLVAVADYLD
Sbjct: 553 NIFGVPEENWESLIGATIGSYLKLLSHEKAGLEESKRLVYLAKRYSSCSQVLVAVADYLD 612

Query: 61  FIYGPA----VSKRFYSEEFQADKVEDAVQVFADNLRHPDKGVCISTLRILCHYEPLQSA 120
           FI+GPA    VSKR YSEEFQADKVEDAVQVFADNLRHPDKGV ISTLRILCHYEPL+S 
Sbjct: 613 FIHGPALEVDVSKRIYSEEFQADKVEDAVQVFADNLRHPDKGVRISTLRILCHYEPLRSE 672

Query: 121 TLTKDPSIDNEMETENLKQYSDDLVGSE 145
              KDP+IDNEMETENL+  S D VGSE
Sbjct: 673 IRIKDPAIDNEMETENLESCSYDSVGSE 700

The following BLAST results are available for this feature:

BLAST of Bhi01G000746 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41740.1	4.5e-20	59.46	villin 2	[more]
AT3G57410.1	1.0e-19	57.32	villin 3	[more]
AT4G30990.1	4.3e-18	39.85	ARM repeat superfamily protein	[more]
AT4G30990.2	4.3e-18	39.85	ARM repeat superfamily protein	[more]
AT4G30160.1	1.1e-13	46.75	villin 4	[more]

BLAST of Bhi01G000746 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10L71	6.8e-21	55.79	Villin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN2 PE=2 SV=1	[more]
O81644	6.4e-19	59.46	Villin-2 OS=Arabidopsis thaliana OX=3702 GN=VLN2 PE=1 SV=2	[more]
O81645	1.4e-18	57.32	Villin-3 OS=Arabidopsis thaliana OX=3702 GN=VLN3 PE=1 SV=2	[more]
O65570	1.5e-12	46.75	Villin-4 OS=Arabidopsis thaliana OX=3702 GN=VLN4 PE=1 SV=1	[more]
Q0J716	5.8e-12	48.61	Villin-5 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN5 PE=3 SV=1	[more]

BLAST of Bhi01G000746 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874757.1	9.7e-65	90.97	LOW QUALITY PROTEIN: small subunit processome component 20 homolog [Benincasa hi...	[more]
XP_011649103.1	5.9e-62	86.49	small subunit processome component 20 homolog isoform X1 [Cucumis sativus] >KGN6...	[more]
KAA0033350.1	4.7e-59	83.78	U3 small nucleolar RNA-associated protein 20 [Cucumis melo var. makuwa]	[more]
TYK21558.1	4.7e-59	83.78	U3 small nucleolar RNA-associated protein 20 [Cucumis melo var. makuwa]	[more]
XP_008457216.1	4.7e-59	83.78	PREDICTED: U3 small nucleolar RNA-associated protein 20 [Cucumis melo]	[more]

BLAST of Bhi01G000746 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIC2	2.8e-62	86.49	DRIM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G148430 PE=4 S...	[more]
A0A5D3DDG1	2.3e-59	83.78	U3 small nucleolar RNA-associated protein 20 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5A7SR09	2.3e-59	83.78	U3 small nucleolar RNA-associated protein 20 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3C531	2.3e-59	83.78	U3 small nucleolar RNA-associated protein 20 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1KL31	2.1e-57	82.43	small subunit processome component 20 homolog OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 116..201 e-value: 1.9E-5 score: 26.2
None	No IPR available	PANTHER	PTHR11977:SF113	VILLIN-3-LIKE ISOFORM X1	coord: 143..217
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 145..201
IPR007122	Villin/Gelsolin	PANTHER	PTHR11977	VILLIN	coord: 143..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000746	Bhi01M000746	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0030686	90S preribosome
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0051015	actin filament binding