Bhi01G000743 (gene) Wax gourd (B227) v1

Overview
NameBhi01G000743
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionAcyl-CoA dehydrogenase
Locationchr1: 19239099 .. 19239404 (+)
RNA-Seq ExpressionBhi01G000743
SyntenyBhi01G000743
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCCTTCTCCATTTTCCGAGGAGCTGCAATCTATGCTGGAATTTACAGTCGATGGATTATGGTATCTTATCAGTCATTGAATATGCTAGGCAGCATGGACAAAACAAAAGGGATGAATTTTGAAGTTTTCCTTTGCAATAATTCACAGTTTTCTTTTGAGAATGCAGGGAAATGCATCAGGAGGTGAGAGTGCTCAGGATGCTGGAGAAAAAGCAAGTGCTTTCATTGATGCTGCTTGGGCATTTATTGAACAAAAATCTTTGCTTCCTGAGAATCCCCCATTAGGTAGTTCTTTTGTTTAA

mRNA sequence

ATGTCGCCTTCTCCATTTTCCGAGGAGCTGCAATCTATGCTGGAATTTACAGTCGATGGATTATGTTTTCTTTTGAGAATGCAGGGAAATGCATCAGGAGGTGAGAGTGCTCAGGATGCTGGAGAAAAAGCAAGTGCTTTCATTGATGCTGCTTGGGCATTTATTGAACAAAAATCTTTGCTTCCTGAGAATCCCCCATTAGGTAGTTCTTTTGTTTAA

Coding sequence (CDS)

ATGTCGCCTTCTCCATTTTCCGAGGAGCTGCAATCTATGCTGGAATTTACAGTCGATGGATTATGTTTTCTTTTGAGAATGCAGGGAAATGCATCAGGAGGTGAGAGTGCTCAGGATGCTGGAGAAAAAGCAAGTGCTTTCATTGATGCTGCTTGGGCATTTATTGAACAAAAATCTTTGCTTCCTGAGAATCCCCCATTAGGTAGTTCTTTTGTTTAA

Protein sequence

MSPSPFSEELQSMLEFTVDGLCFLLRMQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGSSFV
Homology
BLAST of Bhi01G000743 vs. TAIR 10
Match: AT3G06810.1 (acyl-CoA dehydrogenase-related )

HSP 1 Score: 41.2 bits (95), Expect = 4.1e-04
Identity = 16/40 (40.00%), Postives = 30/40 (75.00%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPP 67
           + GNAS GE A++ G +A+  +++A  +I ++++LPE+PP
Sbjct: 341 LMGNASAGERARNTGVQANELVESALGYIARENVLPEHPP 380

BLAST of Bhi01G000743 vs. NCBI nr
Match: KAG6597543.1 (putative pectinesterase/pectinesterase inhibitor 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 83.6 bits (205), Expect = 7.8e-13
Identity = 47/72 (65.28%), Postives = 53/72 (73.61%), Query Frame = 0

Query: 1   MSPSPFSEELQSMLEFTVDGLCFLLRMQGNASGGESAQDAGEKASAFIDAAWAFIEQKSL 60
           M PS FSE LQS+LEF V+       + GNASGGESA+ AGEKA AFIDAAW FIEQKS+
Sbjct: 554 MLPS-FSELLQSLLEFIVNRW-----IMGNASGGESARIAGEKADAFIDAAWEFIEQKSV 613

Query: 61  LPENPPLGSSFV 73
           LPENPP  S  +
Sbjct: 614 LPENPPFASDSI 619

BLAST of Bhi01G000743 vs. NCBI nr
Match: XP_038897612.1 (probable acyl-CoA dehydrogenase IBR3 [Benincasa hispida])

HSP 1 Score: 80.9 bits (198), Expect = 5.0e-12
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGS 70
           + GNASGGESAQ+AGEKASAFIDAAWAFIEQKSLLPENPPL S
Sbjct: 341 IMGNASGGESAQNAGEKASAFIDAAWAFIEQKSLLPENPPLDS 383

BLAST of Bhi01G000743 vs. NCBI nr
Match: KAA0049515.1 (putative acyl-CoA dehydrogenase IBR3 isoform X1 [Cucumis melo var. makuwa] >TYK16195.1 putative acyl-CoA dehydrogenase IBR3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 2.1e-10
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGS 70
           + GNASGGESAQ AGEKA+AF+DAAWAFIEQKSLLPENPP  S
Sbjct: 341 IMGNASGGESAQLAGEKANAFVDAAWAFIEQKSLLPENPPTDS 383

BLAST of Bhi01G000743 vs. NCBI nr
Match: XP_008438907.1 (PREDICTED: probable acyl-CoA dehydrogenase IBR3 isoform X1 [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-10
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGS 70
           + GNASGGESAQ AGEKA AF+DAAWAFIEQKSLLPENPP  S
Sbjct: 341 IMGNASGGESAQLAGEKADAFVDAAWAFIEQKSLLPENPPTDS 383

BLAST of Bhi01G000743 vs. NCBI nr
Match: XP_016898966.1 (PREDICTED: probable acyl-CoA dehydrogenase IBR3 isoform X2 [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-10
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGS 70
           + GNASGGESAQ AGEKA AF+DAAWAFIEQKSLLPENPP  S
Sbjct: 250 IMGNASGGESAQLAGEKADAFVDAAWAFIEQKSLLPENPPTDS 292

BLAST of Bhi01G000743 vs. ExPASy TrEMBL
Match: A0A5D3CXJ9 (Putative acyl-CoA dehydrogenase IBR3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001230 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-10
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGS 70
           + GNASGGESAQ AGEKA+AF+DAAWAFIEQKSLLPENPP  S
Sbjct: 341 IMGNASGGESAQLAGEKANAFVDAAWAFIEQKSLLPENPPTDS 383

BLAST of Bhi01G000743 vs. ExPASy TrEMBL
Match: A0A1S3AX44 (probable acyl-CoA dehydrogenase IBR3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483866 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGS 70
           + GNASGGESAQ AGEKA AF+DAAWAFIEQKSLLPENPP  S
Sbjct: 341 IMGNASGGESAQLAGEKADAFVDAAWAFIEQKSLLPENPPTDS 383

BLAST of Bhi01G000743 vs. ExPASy TrEMBL
Match: A0A1S4DSK0 (probable acyl-CoA dehydrogenase IBR3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483866 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGS 70
           + GNASGGESAQ AGEKA AF+DAAWAFIEQKSLLPENPP  S
Sbjct: 250 IMGNASGGESAQLAGEKADAFVDAAWAFIEQKSLLPENPPTDS 292

BLAST of Bhi01G000743 vs. ExPASy TrEMBL
Match: A0A6J1C8N7 (probable acyl-CoA dehydrogenase IBR3 OS=Momordica charantia OX=3673 GN=LOC111009226 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.6e-10
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGS 70
           + GNASGGESAQ +GEKA+AFID AWAFIEQKS+LPENPP  S
Sbjct: 341 IMGNASGGESAQVSGEKANAFIDCAWAFIEQKSVLPENPPFDS 383

BLAST of Bhi01G000743 vs. ExPASy TrEMBL
Match: A0A6J1IX24 (probable acyl-CoA dehydrogenase IBR3 OS=Cucurbita maxima OX=3661 GN=LOC111479342 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 0

Query: 27  MQGNASGGESAQDAGEKASAFIDAAWAFIEQKSLLPENPPLGS 70
           + GNASGGESA+ AG+KA+AFIDAAW+FIEQ+SLLPENPP  S
Sbjct: 341 IMGNASGGESARIAGDKANAFIDAAWSFIEQRSLLPENPPFDS 383

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G06810.14.1e-0440.00acyl-CoA dehydrogenase-related [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6597543.17.8e-1365.28putative pectinesterase/pectinesterase inhibitor 21, partial [Cucurbita argyrosp... [more]
XP_038897612.15.0e-1290.70probable acyl-CoA dehydrogenase IBR3 [Benincasa hispida][more]
KAA0049515.12.1e-1083.72putative acyl-CoA dehydrogenase IBR3 isoform X1 [Cucumis melo var. makuwa] >TYK1... [more]
XP_008438907.12.8e-1083.72PREDICTED: probable acyl-CoA dehydrogenase IBR3 isoform X1 [Cucumis melo][more]
XP_016898966.12.8e-1083.72PREDICTED: probable acyl-CoA dehydrogenase IBR3 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A5D3CXJ91.0e-1083.72Putative acyl-CoA dehydrogenase IBR3 isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3AX441.3e-1083.72probable acyl-CoA dehydrogenase IBR3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4DSK01.3e-1083.72probable acyl-CoA dehydrogenase IBR3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1C8N76.6e-1079.07probable acyl-CoA dehydrogenase IBR3 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A6J1IX241.5e-0976.74probable acyl-CoA dehydrogenase IBR3 OS=Cucurbita maxima OX=3661 GN=LOC111479342... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M000743Bhi01M000743mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors