Bhi01G000519 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G000519
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4
Location	chr1: 13445088 .. 13445834 (-)
RNA-Seq Expression	Bhi01G000519
Synteny	Bhi01G000519

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTCCTTCTCAAACCTTCAATTTATTAACCTCTATTTTTATGGATTCTCAAAACGACACCGTTGAAGCCGCACCATCCCCATCTTCCACGACTCTAAGCCGCTACGAGAATCAAAAGCGTCGCGACTGGAACACGTTCGGCCACTACATAACCAACCACACCCCACCTTTAGCTTTGGCTTGCTGCAACGGCGCCCACGTGGTCGAGTTCCTCCGCTACCTAGACCAGTTTGGCAAGACCAAGATCCATTCCAACCTCTGCCCTTTCTTTGGCCACCCCAGCCCTTCGGGCCCATGCTCCTGCCCCTTACGCCAAGCATGGGGCAGCCTCGACGCGCTTGTGGGCCGCCTTCGGGCTGCCTATGAGGAGCACGGTGGGAATGCTGAGTTCAACCCTTTTGGGGCTCGCCCCGTGCGCCTCTATTTGCGTGAGGTCCGAGATTTGCAAGCTAAGGCTAGAGGGATTAGTTACCAGAAGAAGAAGAAGCGGAAGCTGTCGTTGAGTCCGCCGCCGCCACGGCAGCATGCGGCTGTGTTTGGGGCTGCTAGCAGTAATGGTGAAAGTACAATAAGCCAGTTGAAGTTATAAACTATATAACTAAATTAAAGCTTTTCATTTACTGAAGAATGAAATATAATTACCTAAATGGTAATTATTTATTATTCATTGTCTACACTCTGCACCAATATCTTTCTCCTTTCACCAACTACATCTTGTATTTCTCCTTTTGATCTTCCCCCATTT

mRNA sequence

CTTTTTCCTTCTCAAACCTTCAATTTATTAACCTCTATTTTTATGGATTCTCAAAACGACACCGTTGAAGCCGCACCATCCCCATCTTCCACGACTCTAAGCCGCTACGAGAATCAAAAGCGTCGCGACTGGAACACGTTCGGCCACTACATAACCAACCACACCCCACCTTTAGCTTTGGCTTGCTGCAACGGCGCCCACGTGGTCGAGTTCCTCCGCTACCTAGACCAGTTTGGCAAGACCAAGATCCATTCCAACCTCTGCCCTTTCTTTGGCCACCCCAGCCCTTCGGGCCCATGCTCCTGCCCCTTACGCCAAGCATGGGGCAGCCTCGACGCGCTTGTGGGCCGCCTTCGGGCTGCCTATGAGGAGCACGGTGGGAATGCTGAGTTCAACCCTTTTGGGGCTCGCCCCGTGCGCCTCTATTTGCGTGAGGTCCGAGATTTGCAAGCTAAGGCTAGAGGGATTAGTTACCAGAAGAAGAAGAAGCGGAAGCTGTCGTTGAGTCCGCCGCCGCCACGGCAGCATGCGGCTGTGTTTGGGGCTGCTAGCAGTAATGGTGAAAGTACAATAAGCCAGTTGAAGTTATAAACTATATAACTAAATTAAAGCTTTTCATTTACTGAAGAATGAAATATAATTACCTAAATGGTAATTATTTATTATTCATTGTCTACACTCTGCACCAATATCTTTCTCCTTTCACCAACTACATCTTGTATTTCTCCTTTTGATCTTCCCCCATTT

Coding sequence (CDS)

ATGGATTCTCAAAACGACACCGTTGAAGCCGCACCATCCCCATCTTCCACGACTCTAAGCCGCTACGAGAATCAAAAGCGTCGCGACTGGAACACGTTCGGCCACTACATAACCAACCACACCCCACCTTTAGCTTTGGCTTGCTGCAACGGCGCCCACGTGGTCGAGTTCCTCCGCTACCTAGACCAGTTTGGCAAGACCAAGATCCATTCCAACCTCTGCCCTTTCTTTGGCCACCCCAGCCCTTCGGGCCCATGCTCCTGCCCCTTACGCCAAGCATGGGGCAGCCTCGACGCGCTTGTGGGCCGCCTTCGGGCTGCCTATGAGGAGCACGGTGGGAATGCTGAGTTCAACCCTTTTGGGGCTCGCCCCGTGCGCCTCTATTTGCGTGAGGTCCGAGATTTGCAAGCTAAGGCTAGAGGGATTAGTTACCAGAAGAAGAAGAAGCGGAAGCTGTCGTTGAGTCCGCCGCCGCCACGGCAGCATGCGGCTGTGTTTGGGGCTGCTAGCAGTAATGGTGAAAGTACAATAAGCCAGTTGAAGTTATAA

Protein sequence

MDSQNDTVEAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRLYLREVRDLQAKARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSNGESTISQLKL

Homology

[Close]

BLAST of Bhi01G000519 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-64
Identity = 112/154 (72.73%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 19  LSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKTKIHSNLCPFFG 78
           LSRYENQKRRDWNTFG Y+ NH PPL+L+ C+GAHV+EFLRYLDQFGKTK+H++LCPFFG
Sbjct: 46  LSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFG 105

Query: 79  HPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRLYLREVRDLQAK 138
           HP+P  PC+CPLRQAWGSLDAL+GRLRAA+EE+GG+ E NPFGAR VRLYLREVRD QAK
Sbjct: 106 HPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAK 165

Query: 139 ARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSN 173
           ARGISY+KKK+++    PPPP   A    ++S N
Sbjct: 166 ARGISYEKKKRKR----PPPPLPPAQPAISSSPN 195

[Close]

BLAST of Bhi01G000519 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 236.5 bits (602), Expect = 1.7e-62
Identity = 112/181 (61.88%), Postives = 142/181 (78.45%), Query Frame = 0


Query: 8   VEAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKT 67
           + ++ SPS+ + SRYENQKRRDWNTFG Y+ NH PPL+L+ C+GAHV+EFLRYLDQFGKT
Sbjct: 42  LSSSSSPSANS-SRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKT 101

Query: 68  KIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRL 127
           K+H+N+C F+GHP+P  PC CPLRQAWGSLDAL+GRLRAA+EE+GG  E NPFGAR VRL
Sbjct: 102 KVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRL 161

Query: 128 YLREVRDLQAKARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSN-------GESTISQL 182
           YLREVRD+Q+KARG+SY+KKK+++     P P    +   A +S+       G S+ +QL
Sbjct: 162 YLREVRDMQSKARGVSYEKKKRKR-----PLPSSSTSSSSAVASHQQFQMLPGTSSTTQL 216

[Close]

BLAST of Bhi01G000519 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 221.1 bits (562), Expect = 7.3e-58
Identity = 108/159 (67.92%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 5   NDTVEAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQF 64
           N + +  P PSS   SRYENQKRRDWNTF  Y+ NH PPL+L  C+GAHV+EFLRYLDQF
Sbjct: 13  NSSTQLTP-PSS---SRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQF 72

Query: 65  GKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARP 124
           GKTK+H   C FFG P+P  PC CPLRQAWGSLDAL+GRLRAAYEE+GG  E NPFG+R 
Sbjct: 73  GKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRA 132

Query: 125 VRLYLREVRDLQAKARGISYQKKKKRKLSLSP--PPPRQ 162
           VRL+LREVRD QAKARG+SY+KK+KR     P   PP Q
Sbjct: 133 VRLFLREVRDFQAKARGVSYEKKRKRVNRQKPQTQPPLQ 167

[Close]

BLAST of Bhi01G000519 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56
Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 13  SPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKTKIHSN 72
           S    T SRYE+QKRRDWNTF  Y+ NH PPLAL+ C+GAHV+EFL+YLDQFGKTK+H  
Sbjct: 23  SSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVA 82

Query: 73  LCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRLYLREV 132
            CP+FGH  P  PCSCPL+QAWGSLDAL+GRLRAAYEE+GG  + NPF AR VR+YLREV
Sbjct: 83  ACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREV 142

Query: 133 RDLQAKARGISYQKKKKRK 152
           R+ QAKARGI Y+KKK+++
Sbjct: 143 RESQAKARGIPYEKKKRKR 161

[Close]

BLAST of Bhi01G000519 vs. TAIR 10
Match: AT3G04510.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56
Identity = 100/144 (69.44%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 7   TVEAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGK 66
           T  +  SP S+  SRYENQKRRDWNTF  Y+ NH PPL+LA C+GAHV++FLRYLDQFGK
Sbjct: 21  TPSSFSSPPSS--SRYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGK 80

Query: 67  TKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVR 126
           TK+H   C FFG P+P  PC CPLRQAWGSLDAL+GRLRAAYEE+GG  E +PFG+R VR
Sbjct: 81  TKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVR 140

Query: 127 LYLREVRDLQAKARGISYQKKKKR 151
           ++LREVRD QAK+RG+SY+KK+KR
Sbjct: 141 IFLREVRDFQAKSRGVSYEKKRKR 162

[Close]

BLAST of Bhi01G000519 vs. ExPASy Swiss-Prot
Match: A2XAV5 (Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-63
Identity = 115/179 (64.25%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 11  APSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKTKIH 70
           +PS SS +LSRYE+QKRRDWNTFG Y+ NH PPL+L+ C+GAHV+EFL+Y+DQFGKTK+H
Sbjct: 70  SPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVH 129

Query: 71  SNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRLYLR 130
           + +CPF+GHP+P  PC CPLRQAWGSLDAL+GRLRAAYEE+GG  E NPFGAR VRLYLR
Sbjct: 130 TPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLR 189

Query: 131 EVRDLQAKARGISYQKKKKRKLSL-----------SPPPPRQHAAVFGAASSNGESTIS 179
           EVR+ QA+ARGISY+KKK++K S            SPPPP       G+AS  G+++ S
Sbjct: 190 EVRETQARARGISYEKKKRKKPSSAGAGAGPSSEGSPPPPG------GSASGGGDTSAS 242

[Close]

BLAST of Bhi01G000519 vs. ExPASy Swiss-Prot
Match: Q6K5X1 (Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-63
Identity = 115/179 (64.25%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 11  APSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKTKIH 70
           +PS SS +LSRYE+QKRRDWNTFG Y+ NH PPL+L+ C+GAHV+EFL+Y+DQFGKTK+H
Sbjct: 70  SPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVH 129

Query: 71  SNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRLYLR 130
           + +CPF+GHP+P  PC CPLRQAWGSLDAL+GRLRAAYEE+GG  E NPFGAR VRLYLR
Sbjct: 130 TPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLR 189

Query: 131 EVRDLQAKARGISYQKKKKRKLSL-----------SPPPPRQHAAVFGAASSNGESTIS 179
           EVR+ QA+ARGISY+KKK++K S            SPPPP       G+AS  G+++ S
Sbjct: 190 EVRETQARARGISYEKKKRKKPSSAGAGAGPSSEGSPPPPG------GSASGGGDTSAS 242

[Close]

BLAST of Bhi01G000519 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-63
Identity = 112/154 (72.73%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 19  LSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKTKIHSNLCPFFG 78
           LSRYENQKRRDWNTFG Y+ NH PPL+L+ C+GAHV+EFLRYLDQFGKTK+H++LCPFFG
Sbjct: 46  LSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFG 105

Query: 79  HPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRLYLREVRDLQAK 138
           HP+P  PC+CPLRQAWGSLDAL+GRLRAA+EE+GG+ E NPFGAR VRLYLREVRD QAK
Sbjct: 106 HPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAK 165

Query: 139 ARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSN 173
           ARGISY+KKK+++    PPPP   A    ++S N
Sbjct: 166 ARGISYEKKKRKR----PPPPLPPAQPAISSSPN 195

[Close]

BLAST of Bhi01G000519 vs. ExPASy Swiss-Prot
Match: O82268 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana OX=3702 GN=LSH3 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.4e-61
Identity = 112/181 (61.88%), Postives = 142/181 (78.45%), Query Frame = 0


Query: 8   VEAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKT 67
           + ++ SPS+ + SRYENQKRRDWNTFG Y+ NH PPL+L+ C+GAHV+EFLRYLDQFGKT
Sbjct: 42  LSSSSSPSANS-SRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKT 101

Query: 68  KIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRL 127
           K+H+N+C F+GHP+P  PC CPLRQAWGSLDAL+GRLRAA+EE+GG  E NPFGAR VRL
Sbjct: 102 KVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRL 161

Query: 128 YLREVRDLQAKARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSN-------GESTISQL 182
           YLREVRD+Q+KARG+SY+KKK+++     P P    +   A +S+       G S+ +QL
Sbjct: 162 YLREVRDMQSKARGVSYEKKKRKR-----PLPSSSTSSSSAVASHQQFQMLPGTSSTTQL 216

[Close]

BLAST of Bhi01G000519 vs. ExPASy Swiss-Prot
Match: Q7XDD0 (Protein G1-like5 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L5 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.3e-61
Identity = 111/165 (67.27%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 7   TVEAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGK 66
           T   + S +  + SRYE+QKRRDWNTFG Y+ NH PPL+LA C+GAHV+EFLRYLDQFGK
Sbjct: 26  TGATSASAAGASPSRYESQKRRDWNTFGQYLRNHRPPLSLARCSGAHVLEFLRYLDQFGK 85

Query: 67  TKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVR 126
           TK+H+  CPFFGHP+P  PC CPLRQAWGSLDALVGRLRAAYEE+GG  E NPFGAR VR
Sbjct: 86  TKVHAPACPFFGHPAPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPENNPFGARAVR 145

Query: 127 LYLREVRDLQAKARGISYQKKKKRKLSLSPPPPRQHAAVFGAASS 172
           LYLREVR+ QA+ARG+SY+KKK++K    PP P   AA    A++
Sbjct: 146 LYLREVREHQARARGVSYEKKKRKK----PPHPSSAAAAHDDAAN 186

[Close]

BLAST of Bhi01G000519 vs. NCBI nr
Match: XP_038874756.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Benincasa hispida])

HSP 1 Score: 380.9 bits (977), Expect = 6.0e-102
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MDSQNDTVEAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRY 60
           MDSQNDTVEAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRY
Sbjct: 1   MDSQNDTVEAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRY 60

Query: 61  LDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPF 120
           LDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPF
Sbjct: 61  LDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPF 120

Query: 121 GARPVRLYLREVRDLQAKARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSNGESTISQL 180
           GARPVRLYLREVRDLQAKARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSNGESTISQL
Sbjct: 121 GARPVRLYLREVRDLQAKARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSNGESTISQL 180

Query: 181 KL 183
           KL
Sbjct: 181 KL 182

[Close]

BLAST of Bhi01G000519 vs. NCBI nr
Match: XP_008438509.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 4.4e-81
Identity = 160/185 (86.49%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MDS-QNDTV-EAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFL 60
           MDS QNDTV E  PS SSTTLSRYENQKRRDW +FGHYITNHTPPLALA C GAHVVEFL
Sbjct: 1   MDSLQNDTVIEPTPSSSSTTLSRYENQKRRDWTSFGHYITNHTPPLALARCTGAHVVEFL 60

Query: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFN 120
           RYLDQFGKTKIHSNLCPFFGHPSPSGPC+CPLRQAWGSLDALVGRLRAAYEEHGGNAE N
Sbjct: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCTCPLRQAWGSLDALVGRLRAAYEEHGGNAETN 120

Query: 121 PFGARPVRLYLREVRDLQAKARGISYQKKK-KRKLSLSPPPPRQHAAVFGAASSNGESTI 180
           PFGARPVR+YLREVRDLQAKARGISYQKKK KR L L PPPPR       AASS  ESTI
Sbjct: 121 PFGARPVRVYLREVRDLQAKARGISYQKKKRKRPLGLPPPPPR------SAASSCSESTI 179

Query: 181 SQLKL 183
           SQLKL
Sbjct: 181 SQLKL 179

[Close]

BLAST of Bhi01G000519 vs. NCBI nr
Match: KAA0049244.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis melo var. makuwa] >TYK17314.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis melo var. makuwa])

HSP 1 Score: 311.2 bits (796), Expect = 5.8e-81
Identity = 159/185 (85.95%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MDS-QNDTV-EAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFL 60
           MDS QNDTV E  PS SSTTLSRYENQKRRDW +FGHYITNHTPPLALA C GAH+VEFL
Sbjct: 1   MDSLQNDTVIEPTPSSSSTTLSRYENQKRRDWTSFGHYITNHTPPLALARCTGAHIVEFL 60

Query: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFN 120
           RYLDQFGKTKIHSNLCPFFGHPSPSGPC+CPLRQAWGSLDALVGRLRAAYEEHGGNAE N
Sbjct: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCTCPLRQAWGSLDALVGRLRAAYEEHGGNAETN 120

Query: 121 PFGARPVRLYLREVRDLQAKARGISYQKKK-KRKLSLSPPPPRQHAAVFGAASSNGESTI 180
           PFGARPVR+YLREVRDLQAKARGISYQKKK KR L L PPPPR       AASS  ESTI
Sbjct: 121 PFGARPVRVYLREVRDLQAKARGISYQKKKRKRPLGLPPPPPR------SAASSCSESTI 179

Query: 181 SQLKL 183
           SQLKL
Sbjct: 181 SQLKL 179

[Close]

BLAST of Bhi01G000519 vs. NCBI nr
Match: XP_004134409.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis sativus] >KGN56850.1 hypothetical protein Csa_010244 [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 2.5e-76
Identity = 152/184 (82.61%), Postives = 158/184 (85.87%), Query Frame = 0


Query: 1   MDS-QNDTV-EAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFL 60
           MDS QNDTV E  PS SSTTLSRYENQKRRDW +FGHYITN TPPLALA C GAHVV+FL
Sbjct: 1   MDSLQNDTVIEPTPSSSSTTLSRYENQKRRDWTSFGHYITNRTPPLALARCTGAHVVDFL 60

Query: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFN 120
           RYLDQFGKTKIHSNLCPFFGHPSPSG C+CPLRQAWGSLDALVGRLRAAYEEHGGNAE N
Sbjct: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGACTCPLRQAWGSLDALVGRLRAAYEEHGGNAETN 120

Query: 121 PFGARPVRLYLREVRDLQAKARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSNGESTIS 180
           PFGARPVR+YLREVRDLQAKARGISYQ KKKRK  L PPP R        ASS  E+T+S
Sbjct: 121 PFGARPVRVYLREVRDLQAKARGISYQ-KKKRKRPLGPPPSR------SGASSCSETTMS 177

Query: 181 QLKL 183
           QLKL
Sbjct: 181 QLKL 177

[Close]

BLAST of Bhi01G000519 vs. NCBI nr
Match: XP_039070951.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Hibiscus syriacus] >KAE8714634.1 Protein G1-like6 [Hibiscus syriacus])

HSP 1 Score: 254.6 bits (649), Expect = 6.4e-64
Identity = 113/151 (74.83%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 10  AAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKTKI 69
           ++ S S +TLSRYENQKRRDWNTFG Y+ NH PPL+L+ C+GAHV+EFLRYLDQFGKTK+
Sbjct: 61  SSSSASPSTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKV 120

Query: 70  HSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRLYL 129
           H+ LCPFFGHP+P  PC CPLRQAWGSLDAL+GRLRAA+EEHGG  E NPFGAR +RLYL
Sbjct: 121 HTQLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEEHGGKPEANPFGARAIRLYL 180

Query: 130 REVRDLQAKARGISYQKKKKRKLSLSPPPPR 161
           REVRD QAKARGISY+KKK+++ S +PPPP+
Sbjct: 181 REVRDSQAKARGISYEKKKRKRPSQAPPPPQ 211

[Close]

BLAST of Bhi01G000519 vs. ExPASy TrEMBL
Match: A0A1S3AX69 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Cucumis melo OX=3656 GN=LOC103483585 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.1e-81
Identity = 160/185 (86.49%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MDS-QNDTV-EAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFL 60
           MDS QNDTV E  PS SSTTLSRYENQKRRDW +FGHYITNHTPPLALA C GAHVVEFL
Sbjct: 1   MDSLQNDTVIEPTPSSSSTTLSRYENQKRRDWTSFGHYITNHTPPLALARCTGAHVVEFL 60

Query: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFN 120
           RYLDQFGKTKIHSNLCPFFGHPSPSGPC+CPLRQAWGSLDALVGRLRAAYEEHGGNAE N
Sbjct: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCTCPLRQAWGSLDALVGRLRAAYEEHGGNAETN 120

Query: 121 PFGARPVRLYLREVRDLQAKARGISYQKKK-KRKLSLSPPPPRQHAAVFGAASSNGESTI 180
           PFGARPVR+YLREVRDLQAKARGISYQKKK KR L L PPPPR       AASS  ESTI
Sbjct: 121 PFGARPVRVYLREVRDLQAKARGISYQKKKRKRPLGLPPPPPR------SAASSCSESTI 179

Query: 181 SQLKL 183
           SQLKL
Sbjct: 181 SQLKL 179

[Close]

BLAST of Bhi01G000519 vs. ExPASy TrEMBL
Match: A0A5D3D237 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001690 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.8e-81
Identity = 159/185 (85.95%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MDS-QNDTV-EAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFL 60
           MDS QNDTV E  PS SSTTLSRYENQKRRDW +FGHYITNHTPPLALA C GAH+VEFL
Sbjct: 1   MDSLQNDTVIEPTPSSSSTTLSRYENQKRRDWTSFGHYITNHTPPLALARCTGAHIVEFL 60

Query: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFN 120
           RYLDQFGKTKIHSNLCPFFGHPSPSGPC+CPLRQAWGSLDALVGRLRAAYEEHGGNAE N
Sbjct: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCTCPLRQAWGSLDALVGRLRAAYEEHGGNAETN 120

Query: 121 PFGARPVRLYLREVRDLQAKARGISYQKKK-KRKLSLSPPPPRQHAAVFGAASSNGESTI 180
           PFGARPVR+YLREVRDLQAKARGISYQKKK KR L L PPPPR       AASS  ESTI
Sbjct: 121 PFGARPVRVYLREVRDLQAKARGISYQKKKRKRPLGLPPPPPR------SAASSCSESTI 179

Query: 181 SQLKL 183
           SQLKL
Sbjct: 181 SQLKL 179

[Close]

BLAST of Bhi01G000519 vs. ExPASy TrEMBL
Match: A0A0A0L4D7 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G134980 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 152/184 (82.61%), Postives = 158/184 (85.87%), Query Frame = 0


Query: 1   MDS-QNDTV-EAAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFL 60
           MDS QNDTV E  PS SSTTLSRYENQKRRDW +FGHYITN TPPLALA C GAHVV+FL
Sbjct: 1   MDSLQNDTVIEPTPSSSSTTLSRYENQKRRDWTSFGHYITNRTPPLALARCTGAHVVDFL 60

Query: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFN 120
           RYLDQFGKTKIHSNLCPFFGHPSPSG C+CPLRQAWGSLDALVGRLRAAYEEHGGNAE N
Sbjct: 61  RYLDQFGKTKIHSNLCPFFGHPSPSGACTCPLRQAWGSLDALVGRLRAAYEEHGGNAETN 120

Query: 121 PFGARPVRLYLREVRDLQAKARGISYQKKKKRKLSLSPPPPRQHAAVFGAASSNGESTIS 180
           PFGARPVR+YLREVRDLQAKARGISYQ KKKRK  L PPP R        ASS  E+T+S
Sbjct: 121 PFGARPVRVYLREVRDLQAKARGISYQ-KKKRKRPLGPPPSR------SGASSCSETTMS 177

Query: 181 QLKL 183
           QLKL
Sbjct: 181 QLKL 177

[Close]

BLAST of Bhi01G000519 vs. ExPASy TrEMBL
Match: A0A6A3BCK9 (Protein G1-like6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110195pilonHSYRG00297 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.1e-64
Identity = 113/151 (74.83%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 10  AAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKTKI 69
           ++ S S +TLSRYENQKRRDWNTFG Y+ NH PPL+L+ C+GAHV+EFLRYLDQFGKTK+
Sbjct: 61  SSSSASPSTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKV 120

Query: 70  HSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRLYL 129
           H+ LCPFFGHP+P  PC CPLRQAWGSLDAL+GRLRAA+EEHGG  E NPFGAR +RLYL
Sbjct: 121 HTQLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEEHGGKPEANPFGARAIRLYL 180

Query: 130 REVRDLQAKARGISYQKKKKRKLSLSPPPPR 161
           REVRD QAKARGISY+KKK+++ S +PPPP+
Sbjct: 181 REVRDSQAKARGISYEKKKRKRPSQAPPPPQ 211

[Close]

BLAST of Bhi01G000519 vs. ExPASy TrEMBL
Match: A0A6A3CCL4 (Protein G1-like6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00007043pilonHSYRG00012 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.9e-64
Identity = 113/149 (75.84%), Postives = 130/149 (87.25%), Query Frame = 0


Query: 10  AAPSPSSTTLSRYENQKRRDWNTFGHYITNHTPPLALACCNGAHVVEFLRYLDQFGKTKI 69
           A+ SP  +TLSRYENQKRRDWNTFG Y+ NH PPL+L+ C+GAHV+EFLRYLDQFGKTK+
Sbjct: 56  ASSSPPPSTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKV 115

Query: 70  HSNLCPFFGHPSPSGPCSCPLRQAWGSLDALVGRLRAAYEEHGGNAEFNPFGARPVRLYL 129
           H+ LCPFFGHP+P  PC CPLRQAWGSLDAL+GRLRAAYEEHGG  E NPFGAR +RLYL
Sbjct: 116 HTQLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEEHGGKPEANPFGARAIRLYL 175

Query: 130 REVRDLQAKARGISYQKKKKRKLSLSPPP 159
           REVRD QAKARGISY+KKK+++   +PPP
Sbjct: 176 REVRDSQAKARGISYEKKKRKRPPKAPPP 204

The following BLAST results are available for this feature:

BLAST of Bhi01G000519 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23290.2	1.8e-64	72.73	Protein of unknown function (DUF640)	[more]
AT2G31160.1	1.7e-62	61.88	Protein of unknown function (DUF640)	[more]
AT5G28490.1	7.3e-58	67.92	Protein of unknown function (DUF640)	[more]
AT1G07090.1	1.1e-56	69.78	Protein of unknown function (DUF640)	[more]
AT3G04510.1	1.1e-56	69.44	Protein of unknown function (DUF640)	[more]

BLAST of Bhi01G000519 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XAV5	1.1e-63	64.25	Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1	[more]
Q6K5X1	1.1e-63	64.25	Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1	[more]
Q9LW68	2.5e-63	72.73	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
O82268	2.4e-61	61.88	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
Q7XDD0	5.3e-61	67.27	Protein G1-like5 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L5 PE=1 SV=1	[more]

BLAST of Bhi01G000519 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874756.1	6.0e-102	100.00	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Benincasa hispida]	[more]
XP_008438509.1	4.4e-81	86.49	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis melo]	[more]
KAA0049244.1	5.8e-81	85.95	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis melo var. makuwa] >TYK17314....	[more]
XP_004134409.1	2.5e-76	82.61	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis sativus] >KGN56850.1 hypothe...	[more]
XP_039070951.1	6.4e-64	74.83	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Hibiscus syriacus] >KAE8714634....	[more]

BLAST of Bhi01G000519 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AX69	2.1e-81	86.49	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Cucumis melo OX=3656 GN=LOC1034835...	[more]
A0A5D3D237	2.8e-81	85.95	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0L4D7	1.2e-76	82.61	ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G134980 PE=3 S...	[more]
A0A6A3BCK9	3.1e-64	74.83	Protein G1-like6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110195pilonHSYRG00...	[more]
A0A6A3CCL4	6.9e-64	75.84	Protein G1-like6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00007043pilonHSYRG00...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 13..134 e-value: 5.8E-61 score: 204.2
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 21..148 score: 72.505547
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR31165:SF65	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-LIKE	coord: 10..152
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 10..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000519	Bhi01M000519	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus