Bhi01G000470 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G000470
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	28 kDa ribonucleoprotein, chloroplastic
Location	chr1: 11965431 .. 11967568 (+)
RNA-Seq Expression	Bhi01G000470
Synteny	Bhi01G000470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGCCACCGGAGCCTCCTTCTTCGCCACTCCCTTAAGGGGTTCACGGTCCAAGCACTGGCTCTCTGATTCTCTTCTCGCAACCCCATCCACCCAAGTTTTGCCCATATTGTCCCGCTCTCAAGCCATTGAATCGGCTCCGCTAAGAGCTTTCTCGGAGAGGGGGCGGCCGGTTTTGATCATCTCGGCCGCCGTTGTGCAAGGAGAGACGGCTGTGACGGCGGGGGTTGAAGAGGGTGTGGAGGAGGATACGGCGGAGAAGGGAGGAGGGGAGGCGGTGGATGGTGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTATTTTGGGAACCTGCCTTATAGTGTTGACAGTTCCCAGCTCGCCGCTATCGTTCAGGATTATGGAGTCGCCGAGCTTATTGAGGTACATTGCCTGCAAATGTCGCTGTTTAGTTTCCTGCAAATGTCATTGATTGGTTTCTTCATTGACTTCTAGTACATGATTTCACCTCTAAGCAACGACATTATATGAAAACTTTGCTTTGGAATCAAGCTCGCATGAGATATCTGGCAAATCACTATGAAGGGTGGGGGTATGAGAGCAACAGTTCCAATTCCTTTTGTACATTTGGTGCTTGATTCCCATATTAGACAAGCTCGCTATGGGCAACTAAGAGACCAACTATATGACTATAGATCTAGATGTTTTTTAAGTAATGACCTCAAATCTTAGTGTCACCTATCCATGATTCTGAGTTTTTGAGACGTTGTTGGTTTAGGAGATCGTGAAGTTGTATGGAATTGAGATGCATATTATTAGCTCAAACATCCACAGAAAACCCACATGCATGTTTAGGGGCATATAGGTTTGGTAGTTGGTGGCAACTGCATGTTGATCCAATGAGCTATTAATTTTTCTACCAAATTGCTGCAACACCATGAGACATTCAACTAGTGGGTTTCATGGAATGAAACCATTATAGAAGAGTATGATTATATTACTAGGGTGCTACAGTCGCAAGGCGGCATCCAATATATTATCCATTTGAGGAATGTGCCCTCTGTTTGTGCAACTTTGAGGGGTTGTTTGCATAAATAGCTGCTAACCTTGCTTTACCTTCATTACCACTATAATACAAGCTCAAAGCATTAACCTTGATTAGTTGTTCGGAATTCGAACCATGGTGATCATCCAACTTAGATTTATTATTCTACGAGTTTTTTAAGCAACTGAATATAGTAAAACAAGGTAGATGCTCTATGAGATTAGTTGTGGTGTGTGTAAATTGGATCTGCTGGATTAGACACTCATAGAAACTCCAGGTGCTTTATGAAAAGATCCAATGTAGCAATTTCATTTGTCAAATCCCGAAAACAGACTTCTTTACTAGCTGCATTCAATCTTTACTTTGAACTATTTCGCCAAGAGCATATTTTCACATCAAATCTCATATTTCTTAAAAGTCTCTAATCAATTCGAGTGGTATAAGGTTCTGTATGACAGGAATACTGGAAAAAGTAGAGGATTTGCATTTGTAACCATGAGCAGTATTAAAGATTGCAATAAAGTCATTGAAAATCTGGATGGAACTGTGAGAATCTCTCTCTTTCACACTTCATTCTCTCCTTTATGTTGATCTATACTTAGATTGCTTTAAGTTCAGAAATAATTGGAACTATTGGACTCTGATGCTAAATATGAGTATCACTTGCATAACCAGGCTTATATGGGCAGAATTTTGAGGGTTAATTTCTCAGACAAACCTAAGCCCAAGGAACCTTTATATCCAGAAACTGAGTATAAACTTTTTGTCGGAAACTTATCCTGGTCAGTAACATCTGAAACTTTGACACAAGCATTTCAAGGATATGGAAATGTGGTAGGAGCAAGGGTTATTTACAATGGGGAGACTGGAAAGTCACGTGGTTATGGCTTTGTTTCTTATTCAACAAAATCAGAGATGGAAACAGCTCTTGAAGCTCTTAATGAAGTGGTAAGAGTCTGTCTTGGTTCTCCTGTATCTTTTTGTCCACGTTGTAATTATATCATATAATATCAGGTAGTTCAATTATCTGGTTTTTTGAACTTCATAGGAACTTGAAGGCAGGGTAATACGTGTAAGCTTGGCTGAAGGAAAACAGGCACAGGGGTAA

mRNA sequence

ATGGCCGCCGCCACCGGAGCCTCCTTCTTCGCCACTCCCTTAAGGGGTTCACGGTCCAAGCACTGGCTCTCTGATTCTCTTCTCGCAACCCCATCCACCCAAGTTTTGCCCATATTGTCCCGCTCTCAAGCCATTGAATCGGCTCCGCTAAGAGCTTTCTCGGAGAGGGGGCGGCCGGTTTTGATCATCTCGGCCGCCGTTGTGCAAGGAGAGACGGCTGTGACGGCGGGGGTTGAAGAGGGTGTGGAGGAGGATACGGCGGAGAAGGGAGGAGGGGAGGCGGTGGATGGTGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTATTTTGGGAACCTGCCTTATAGTGTTGACAGTTCCCAGCTCGCCGCTATCGTTCAGGATTATGGAGTCGCCGAGCTTATTGAGGTTCTGTATGACAGGAATACTGGAAAAAGTAGAGGATTTGCATTTGTAACCATGAGCAGTATTAAAGATTGCAATAAAGTCATTGAAAATCTGGATGGAACTGCTTATATGGGCAGAATTTTGAGGGTTAATTTCTCAGACAAACCTAAGCCCAAGGAACCTTTATATCCAGAAACTGAGTATAAACTTTTTGTCGGAAACTTATCCTGGTCAGTAACATCTGAAACTTTGACACAAGCATTTCAAGGATATGGAAATGTGGTAGGAGCAAGGGTTATTTACAATGGGGAGACTGGAAAGTCACGTGGTTATGGCTTTGTTTCTTATTCAACAAAATCAGAGATGGAAACAGCTCTTGAAGCTCTTAATGAAGTGGAACTTGAAGGCAGGGTAATACGTGTAAGCTTGGCTGAAGGAAAACAGGCACAGGGGTAA

Coding sequence (CDS)

ATGGCCGCCGCCACCGGAGCCTCCTTCTTCGCCACTCCCTTAAGGGGTTCACGGTCCAAGCACTGGCTCTCTGATTCTCTTCTCGCAACCCCATCCACCCAAGTTTTGCCCATATTGTCCCGCTCTCAAGCCATTGAATCGGCTCCGCTAAGAGCTTTCTCGGAGAGGGGGCGGCCGGTTTTGATCATCTCGGCCGCCGTTGTGCAAGGAGAGACGGCTGTGACGGCGGGGGTTGAAGAGGGTGTGGAGGAGGATACGGCGGAGAAGGGAGGAGGGGAGGCGGTGGATGGTGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTATTTTGGGAACCTGCCTTATAGTGTTGACAGTTCCCAGCTCGCCGCTATCGTTCAGGATTATGGAGTCGCCGAGCTTATTGAGGTTCTGTATGACAGGAATACTGGAAAAAGTAGAGGATTTGCATTTGTAACCATGAGCAGTATTAAAGATTGCAATAAAGTCATTGAAAATCTGGATGGAACTGCTTATATGGGCAGAATTTTGAGGGTTAATTTCTCAGACAAACCTAAGCCCAAGGAACCTTTATATCCAGAAACTGAGTATAAACTTTTTGTCGGAAACTTATCCTGGTCAGTAACATCTGAAACTTTGACACAAGCATTTCAAGGATATGGAAATGTGGTAGGAGCAAGGGTTATTTACAATGGGGAGACTGGAAAGTCACGTGGTTATGGCTTTGTTTCTTATTCAACAAAATCAGAGATGGAAACAGCTCTTGAAGCTCTTAATGAAGTGGAACTTGAAGGCAGGGTAATACGTGTAAGCTTGGCTGAAGGAAAACAGGCACAGGGGTAA

Protein sequence

MAAATGASFFATPLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVLIISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG

Homology

[Close]

BLAST of Bhi01G000470 vs. TAIR 10
Match: AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 261.9 bits (668), Expect = 5.8e-70
Identity = 132/221 (59.73%), Postives = 178/221 (80.54%), Query Frame = 0


Query: 58  RPVLIISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSV 117
           +P+LI S +  +    ++  +   +EE+  + G    +D   P  + +TKLYFGNLPY+V
Sbjct: 40  KPLLISSRSCSRRFRVLSETITVKLEEEEKDDGASAVLD---PPAAVNTKLYFGNLPYNV 99

Query: 118 DSSQLAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRIL 177
           DS+ LA I+QD+   EL+EVLY+R+TG+SRGFAFVTMS+++DCN +I+NLDGT Y+GR L
Sbjct: 100 DSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRAL 159

Query: 178 RVNFSDKPKP-KEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGK 237
           +VNF+DKPKP KEPLYPETE+KLFVGNLSW+VTSE+L  AF+  G+VVGARV+++G+TG+
Sbjct: 160 KVNFADKPKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGR 219

Query: 238 SRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQ 278
           SRGYGFV YS+K+EMETALE+L+  ELEGR IRV+LA+GK+
Sbjct: 220 SRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLAQGKK 257

[Close]

BLAST of Bhi01G000470 vs. TAIR 10
Match: AT5G50250.1 (chloroplast RNA-binding protein 31B )

HSP 1 Score: 146.0 bits (367), Expect = 4.6e-35
Identity = 94/263 (35.74%), Postives = 142/263 (53.99%), Query Frame = 0


Query: 17  SRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVLIISAAVVQGETAVTA 76
           S   H  + SL + P    L + S++    S  +   S+         A   +GE     
Sbjct: 34  SSESHRFNFSLSSRPVNLTLSLKSKTLRNSSPVVTFVSQTSN-----WAEEEEGEDGSIG 93

Query: 77  GVEEGVEEDTAEKGGGEAVDG-GSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGVAELI 136
           G    V+E        E+ DG G P      KL+ GNLPY VDS  LA + +  G  E+ 
Sbjct: 94  GTSVTVDESF------ESEDGVGFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEIS 153

Query: 137 EVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPL 196
           EV+Y+R+T +SRGF FVTMS++++  K +E  +     GR L VN +     +P+ ++P 
Sbjct: 154 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPE-RQPR 213

Query: 197 YPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYGFVSYSTKSEM 256
             +  ++++VGNL W V S  L + F  +G VV ARV+ + ETG+SRG+GFV  S ++E+
Sbjct: 214 VYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEV 273

Query: 257 ETALEALNEVELEGRVIRVSLAE 275
             A+ AL+   LEGR I+V++AE
Sbjct: 274 NVAIAALDGQNLEGRAIKVNVAE 284

[Close]

BLAST of Bhi01G000470 vs. TAIR 10
Match: AT3G52380.1 (chloroplast RNA-binding protein 33 )

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-34
Identity = 80/221 (36.20%), Postives = 132/221 (59.73%), Query Frame = 0


Query: 74  VTAGVEEGVEEDTAEKG--GGEAVDGGSPVESGS---TKLYFGNLPYSVDSSQLAAIVQD 133
           + A VEE  EE+  E+G  G E V+        S    +LY GNLPY++ SS+L+ I  +
Sbjct: 81  IQASVEE--EEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGE 140

Query: 134 YGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFSDKPKPK 193
            G    ++++YD+ T +SRGF FVTM SI++  + ++  + +   GR ++VNF + P+  
Sbjct: 141 AGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGG 200

Query: 194 E------------PLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGK 253
           E              Y ++ +K++ GNL W++TS+ L  AF     V+GA+VIY   TG+
Sbjct: 201 ENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGR 260

Query: 254 SRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQ 278
           SRG+GF+S+ +   +++AL  +N VE+EGR +R++LA  ++
Sbjct: 261 SRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASERE 299

[Close]

BLAST of Bhi01G000470 vs. TAIR 10
Match: AT4G24770.1 (31-kDa RNA binding protein )

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-34
Identity = 82/201 (40.80%), Postives = 117/201 (58.21%), Query Frame = 0


Query: 78  VEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGVAELIEV 137
           V EG E +     G  +     P  S   KL+ GNL Y V+S  LA + +  G  E+ EV
Sbjct: 122 VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEV 181

Query: 138 LYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPLYP 197
           +Y+R T +SRGF FVTMSS+ +    +E  +     GR+L VN +     +P+ + P   
Sbjct: 182 IYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRVY 241

Query: 198 ETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMET 257
           E  ++++VGNL W V +  L Q F  +G VV ARV+Y+ ETG+SRG+GFV+ S   E+  
Sbjct: 242 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 301

Query: 258 ALEALNEVELEGRVIRVSLAE 275
           A+ AL+   LEGR IRV++AE
Sbjct: 302 AISALDGQNLEGRAIRVNVAE 321

[Close]

BLAST of Bhi01G000470 vs. TAIR 10
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 142.5 bits (358), Expect = 5.1e-34
Identity = 80/216 (37.04%), Postives = 121/216 (56.02%), Query Frame = 0


Query: 83  EEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGVAELIEVLYDRN 142
           E +  E G  +         S   KL+ GNLP++VDS+QLA + +  G  E++EV+YD+ 
Sbjct: 68  EFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKI 127

Query: 143 TGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLY---PETEY-- 202
           TG+SRGF FVTMSS+ +     +  +G    GR LRVN    P  +E  +   P + +  
Sbjct: 128 TGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGS 187

Query: 203 -----------------KLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGY 262
                            +++VGNLSW V    L   F   G VV ARVIY+ ++G+S+G+
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247

Query: 263 GFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGK 277
           GFV+Y +  E++ A+++L+  +L+GR IRVS AE +
Sbjct: 248 GFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEAR 283

[Close]

BLAST of Bhi01G000470 vs. ExPASy Swiss-Prot
Match: P28644 (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.2e-37
Identity = 92/214 (42.99%), Postives = 132/214 (61.68%), Query Frame = 0


Query: 66  AVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGS-PVESGSTKLYFGNLPYSVDSSQLAA 125
           AV++GE+     V  G E   +++GG E   G S P E    KL+ GNLPY VDS +LA 
Sbjct: 16  AVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPE--EAKLFVGNLPYDVDSEKLAG 75

Query: 126 IVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFSDK 185
           I    GV E+ EV+Y+R T +SRGF FVTMS++++  K +E L+G    GR L VN    
Sbjct: 76  IFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVN-KAA 135

Query: 186 PKPKEPLYPETEY----KLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGY 245
           P+      P  ++    +++VGNL W V +  L Q F  +G VV ARV+ + ETG+SRG+
Sbjct: 136 PRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGF 195

Query: 246 GFVSYSTKSEMETALEALNEVELEGRVIRVSLAE 275
           GFV+ S++SE+  A+ AL+   L+GR +RV++AE
Sbjct: 196 GFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAE 226

[Close]

BLAST of Bhi01G000470 vs. ExPASy Swiss-Prot
Match: P19684 (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-36
Identity = 87/218 (39.91%), Postives = 136/218 (62.39%), Query Frame = 0


Query: 71  ETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYG 130
           E A++A  EE +EE   E+   E+V+GG        +LY GNLP+S+ SSQL+ I  + G
Sbjct: 88  EVALSAEEEEEIEE-KEERVESESVEGG--------RLYVGNLPFSMTSSQLSEIFAEAG 147

Query: 131 VAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFSDKPKPKE- 190
               +E++YDR T +SRGFAFVTM S+++  + I   DG+   GR ++VNF + P+  E 
Sbjct: 148 TVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGER 207

Query: 191 -----------PLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSR 250
                        + ++ +KL+V NLSW++TS+ L  AF      + A+VIY+  +G+SR
Sbjct: 208 EVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSR 267

Query: 251 GYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGK 277
           G+GF+++S+   M +AL+ +NEVELEGR +R+++A  K
Sbjct: 268 GFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQK 296

[Close]

BLAST of Bhi01G000470 vs. ExPASy Swiss-Prot
Match: P19683 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-35
Identity = 82/207 (39.61%), Postives = 126/207 (60.87%), Query Frame = 0


Query: 79  EEGVEEDTAEKGGGEAVDGGSPVES-----GSTKLYFGNLPYSVDSSQLAAIVQDYGVAE 138
           EEG  E   + G  + V+     E         KL+ GNLPY VDS  LA + +  GV E
Sbjct: 104 EEGFVEAVGDAGESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVE 163

Query: 139 LIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFS----DKPKPKE 198
           + EV+Y+R+T +SRGF FVTMS++++  K +E  +     GR+L VN +    ++P+ + 
Sbjct: 164 IAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPE-RP 223

Query: 199 PLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYGFVSYSTKS 258
           P   E  Y+++VGN+ W +    L Q F  +G VV ARV+Y+ ETG+SRG+GFV+ ++++
Sbjct: 224 PRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEA 283

Query: 259 EMETALEALNEVELEGRVIRVSLAEGK 277
           EM  A+  L+   L+GR IRV++AE +
Sbjct: 284 EMSDAIANLDGQSLDGRTIRVNVAEDR 309

[Close]

BLAST of Bhi01G000470 vs. ExPASy Swiss-Prot
Match: P82277 (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP2 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.9e-34
Identity = 78/200 (39.00%), Postives = 127/200 (63.50%), Query Frame = 0


Query: 83  EEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGVAELIEVLYDRN 142
           EE ++      + DG      G+ +LY GN+P ++++ +L  IV+++G  E+ EV+YD+ 
Sbjct: 66  EETSSSSTASSSSDG-----EGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKY 125

Query: 143 TGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFSDKP---------KPKEPLYP 202
           +G+SR F FVTM +++D N VIE L+ T   GR ++VN ++KP         + ++  + 
Sbjct: 126 SGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFV 185

Query: 203 ETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMET 262
           E+ YK+++GNL+ +VT+E L   F   G V+GA+V     T KS G+GFVS+S++ E+E 
Sbjct: 186 ESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEA 245

Query: 263 ALEALNEVELEGRVIRVSLA 274
           A++ALN   LEG+ IRV+ A
Sbjct: 246 AIQALNNSVLEGQKIRVNKA 260

[Close]

BLAST of Bhi01G000470 vs. ExPASy Swiss-Prot
Match: Q9FGS0 (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31B PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.5e-34
Identity = 94/263 (35.74%), Postives = 142/263 (53.99%), Query Frame = 0


Query: 17  SRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVLIISAAVVQGETAVTA 76
           S   H  + SL + P    L + S++    S  +   S+         A   +GE     
Sbjct: 34  SSESHRFNFSLSSRPVNLTLSLKSKTLRNSSPVVTFVSQTSN-----WAEEEEGEDGSIG 93

Query: 77  GVEEGVEEDTAEKGGGEAVDG-GSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGVAELI 136
           G    V+E        E+ DG G P      KL+ GNLPY VDS  LA + +  G  E+ 
Sbjct: 94  GTSVTVDESF------ESEDGVGFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEIS 153

Query: 137 EVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPL 196
           EV+Y+R+T +SRGF FVTMS++++  K +E  +     GR L VN +     +P+ ++P 
Sbjct: 154 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPE-RQPR 213

Query: 197 YPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYGFVSYSTKSEM 256
             +  ++++VGNL W V S  L + F  +G VV ARV+ + ETG+SRG+GFV  S ++E+
Sbjct: 214 VYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEV 273

Query: 257 ETALEALNEVELEGRVIRVSLAE 275
             A+ AL+   LEGR I+V++AE
Sbjct: 274 NVAIAALDGQNLEGRAIKVNVAE 284

[Close]

BLAST of Bhi01G000470 vs. NCBI nr
Match: XP_004134038.1 (28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KGN56810.1 hypothetical protein Csa_010830 [Cucumis sativus])

HSP 1 Score: 474.6 bits (1220), Expect = 6.1e-130
Identity = 250/279 (89.61%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 2   AAATGASFFATPLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVL 61
           AAATGASFFAT LRGSRSKHWLSDSLLATPSTQVLPILSRS AIES  LRA SE+ RPV+
Sbjct: 5   AAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVM 64

Query: 62  IISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQ 121
           IISAAVVQGETAVT GVEEGVEE+T        V+GGSPVESGSTKLYFGNLPYSVDSSQ
Sbjct: 65  IISAAVVQGETAVTVGVEEGVEEET-------EVEGGSPVESGSTKLYFGNLPYSVDSSQ 124

Query: 122 LAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNF 181
           LAAIVQDYG+AELIEVLYDRNTGKSRGFAFVTMSSI+DCNKVIENLDG+AYMGRILRVNF
Sbjct: 125 LAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNF 184

Query: 182 SDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYG 241
           SDKPKPKEPLYPETEYKLFVGNLSWSVTSE LTQAFQ YGNVVGARVIY+GETGKSRGYG
Sbjct: 185 SDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYG 244

Query: 242 FVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG 281
           FVSYSTKSEMETALE +NE+ELEGRVIRVSLAEGKQA G
Sbjct: 245 FVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG 276

[Close]

BLAST of Bhi01G000470 vs. NCBI nr
Match: XP_016898952.1 (PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein [Cucumis melo])

HSP 1 Score: 468.0 bits (1203), Expect = 5.7e-128
Identity = 247/269 (91.82%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 2   AAATGASFFATPLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVL 61
           AAATGASFF TPLRGSRSKHW SDSLLATPSTQVLPILSRS  IES PLRA SER RPVL
Sbjct: 5   AAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVL 64

Query: 62  IISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQ 121
           IISAAVVQGETAV  GVEEGVEE+T       AV+GGSPVESGSTKLYFGNLPYSVDSSQ
Sbjct: 65  IISAAVVQGETAVMVGVEEGVEEET-------AVEGGSPVESGSTKLYFGNLPYSVDSSQ 124

Query: 122 LAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNF 181
           LAAIVQD+GVAELIEVLYDRNTGKSRGFAFVTMSSI+DCNKVIENLDGTAYMGRILRVNF
Sbjct: 125 LAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNF 184

Query: 182 SDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYG 241
           SDKPKPKEPLYPETEYKLFVGNLSWSVTSE LTQAFQ YGNVVGARVIYNGETGKSRGYG
Sbjct: 185 SDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYG 244

Query: 242 FVSYSTKSEMETALEALNEVELEGRVIRV 271
           FVSYSTKSEMETALEALNEVELEGRVIRV
Sbjct: 245 FVSYSTKSEMETALEALNEVELEGRVIRV 266

[Close]

BLAST of Bhi01G000470 vs. NCBI nr
Match: KAA0049207.1 (putative G3BP-like protein [Cucumis melo var. makuwa] >TYK17351.1 putative G3BP-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 454.5 bits (1168), Expect = 6.5e-124
Identity = 239/260 (91.92%), Postives = 243/260 (93.46%), Query Frame = 0


Query: 2   AAATGASFFATPLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVL 61
           AAATGASFF TPLRGSRSKHW SDSLLATPSTQVLPILSRS  IES PLRA SER RPVL
Sbjct: 5   AAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVL 64

Query: 62  IISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQ 121
           IISAAVVQGETAVT GVEEGVEE+T       AV+GGSPVESGSTKLYFGNLPYSVDSSQ
Sbjct: 65  IISAAVVQGETAVTVGVEEGVEEET-------AVEGGSPVESGSTKLYFGNLPYSVDSSQ 124

Query: 122 LAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNF 181
           LAAIVQD+GVAELIEVLYDRNTGKSRGFAFVTMSSI+DCNKVIENLDGTAYMGRILRVNF
Sbjct: 125 LAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNF 184

Query: 182 SDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYG 241
           SDKPKPKEPLYPETEYKLFVGNLSWSVTSE LTQAFQ YGNVVGARVIYNGETGKSRGYG
Sbjct: 185 SDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYG 244

Query: 242 FVSYSTKSEMETALEALNEV 262
           FVSYSTKSEMETALEALNEV
Sbjct: 245 FVSYSTKSEMETALEALNEV 257

[Close]

BLAST of Bhi01G000470 vs. NCBI nr
Match: XP_022157973.1 (28 kDa ribonucleoprotein, chloroplastic [Momordica charantia])

HSP 1 Score: 448.7 bits (1153), Expect = 3.6e-122
Identity = 238/281 (84.70%), Postives = 254/281 (90.39%), Query Frame = 0


Query: 2   AAATGASFFAT--PLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRP 61
           AA  G+SF A+    +G RSKHWLSDSLLA PSTQ+LP+LSR  A+ESA LRAFSE+ RP
Sbjct: 5   AATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRP 64

Query: 62  VLIISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDS 121
           VL ISAAVVQGE AVTA  EEGV E   EKGGGEAV GGSPVE+GSTKLYFGNLPYSVDS
Sbjct: 65  VLGISAAVVQGEPAVTADAEEGVAE---EKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDS 124

Query: 122 SQLAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRV 181
           SQLA IVQ++GV ELIEVLYDRNTGKSRGFAFVTMSSI+DCN+VIENLDG+AYMGR+LRV
Sbjct: 125 SQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGSAYMGRVLRV 184

Query: 182 NFSDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRG 241
           NFSDKPKPKEPLYPETEYKLFVGNLSWSVTSE+LTQAFQ YGNVVGARVIYNGETG+SRG
Sbjct: 185 NFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRG 244

Query: 242 YGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG 281
           YGFVSYSTK EME ALEALNEVELEGRVIRVSLAEGKQAQG
Sbjct: 245 YGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG 282

[Close]

BLAST of Bhi01G000470 vs. NCBI nr
Match: XP_022979333.1 (putative G3BP-like protein [Cucurbita maxima])

HSP 1 Score: 448.0 bits (1151), Expect = 6.1e-122
Identity = 230/269 (85.50%), Postives = 246/269 (91.45%), Query Frame = 0


Query: 2   AAATGASFFATPLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVL 61
           AAATG SFF TP+RGSRSKHWLSDS LATPSTQVLPILSR  A++SAPLRAFSER RP  
Sbjct: 3   AAATGVSFFTTPIRGSRSKHWLSDSPLATPSTQVLPILSRPLAVKSAPLRAFSERWRPAT 62

Query: 62  IISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQ 121
           +ISAA VQGE A+T G EEGVEE+TAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDS Q
Sbjct: 63  VISAASVQGEAALTVGFEEGVEEETAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSPQ 122

Query: 122 LAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNF 181
           LAAIVQDYGVAELIEVLYDR+TGKSRGFAFVTM+SI+DCNKVIENL+G  YMGRILRVNF
Sbjct: 123 LAAIVQDYGVAELIEVLYDRDTGKSRGFAFVTMNSIEDCNKVIENLNGATYMGRILRVNF 182

Query: 182 SDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYG 241
           SDKPKPKE L+PETEYKLFV NL+WSVTSE+LTQAFQ YGNVVGARVIYNGETG+SRGYG
Sbjct: 183 SDKPKPKEHLFPETEYKLFVRNLAWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYG 242

Query: 242 FVSYSTKSEMETALEALNEVELEGRVIRV 271
           FVSYSTKSEMETAL ALN+   EGRV+ V
Sbjct: 243 FVSYSTKSEMETALVALNDAVFEGRVLSV 271

[Close]

BLAST of Bhi01G000470 vs. ExPASy TrEMBL
Match: A0A0A0L496 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134590 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.9e-130
Identity = 250/279 (89.61%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 2   AAATGASFFATPLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVL 61
           AAATGASFFAT LRGSRSKHWLSDSLLATPSTQVLPILSRS AIES  LRA SE+ RPV+
Sbjct: 5   AAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVM 64

Query: 62  IISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQ 121
           IISAAVVQGETAVT GVEEGVEE+T        V+GGSPVESGSTKLYFGNLPYSVDSSQ
Sbjct: 65  IISAAVVQGETAVTVGVEEGVEEET-------EVEGGSPVESGSTKLYFGNLPYSVDSSQ 124

Query: 122 LAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNF 181
           LAAIVQDYG+AELIEVLYDRNTGKSRGFAFVTMSSI+DCNKVIENLDG+AYMGRILRVNF
Sbjct: 125 LAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNF 184

Query: 182 SDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYG 241
           SDKPKPKEPLYPETEYKLFVGNLSWSVTSE LTQAFQ YGNVVGARVIY+GETGKSRGYG
Sbjct: 185 SDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYG 244

Query: 242 FVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG 281
           FVSYSTKSEMETALE +NE+ELEGRVIRVSLAEGKQA G
Sbjct: 245 FVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG 276

[Close]

BLAST of Bhi01G000470 vs. ExPASy TrEMBL
Match: A0A1S4DSH7 (LOW QUALITY PROTEIN: putative G3BP-like protein OS=Cucumis melo OX=3656 GN=LOC103483544 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.8e-128
Identity = 247/269 (91.82%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 2   AAATGASFFATPLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVL 61
           AAATGASFF TPLRGSRSKHW SDSLLATPSTQVLPILSRS  IES PLRA SER RPVL
Sbjct: 5   AAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVL 64

Query: 62  IISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQ 121
           IISAAVVQGETAV  GVEEGVEE+T       AV+GGSPVESGSTKLYFGNLPYSVDSSQ
Sbjct: 65  IISAAVVQGETAVMVGVEEGVEEET-------AVEGGSPVESGSTKLYFGNLPYSVDSSQ 124

Query: 122 LAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNF 181
           LAAIVQD+GVAELIEVLYDRNTGKSRGFAFVTMSSI+DCNKVIENLDGTAYMGRILRVNF
Sbjct: 125 LAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNF 184

Query: 182 SDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYG 241
           SDKPKPKEPLYPETEYKLFVGNLSWSVTSE LTQAFQ YGNVVGARVIYNGETGKSRGYG
Sbjct: 185 SDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYG 244

Query: 242 FVSYSTKSEMETALEALNEVELEGRVIRV 271
           FVSYSTKSEMETALEALNEVELEGRVIRV
Sbjct: 245 FVSYSTKSEMETALEALNEVELEGRVIRV 266

[Close]

BLAST of Bhi01G000470 vs. ExPASy TrEMBL
Match: A0A5D3CZH4 (Putative G3BP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002080 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.2e-124
Identity = 239/260 (91.92%), Postives = 243/260 (93.46%), Query Frame = 0


Query: 2   AAATGASFFATPLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVL 61
           AAATGASFF TPLRGSRSKHW SDSLLATPSTQVLPILSRS  IES PLRA SER RPVL
Sbjct: 5   AAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVL 64

Query: 62  IISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQ 121
           IISAAVVQGETAVT GVEEGVEE+T       AV+GGSPVESGSTKLYFGNLPYSVDSSQ
Sbjct: 65  IISAAVVQGETAVTVGVEEGVEEET-------AVEGGSPVESGSTKLYFGNLPYSVDSSQ 124

Query: 122 LAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNF 181
           LAAIVQD+GVAELIEVLYDRNTGKSRGFAFVTMSSI+DCNKVIENLDGTAYMGRILRVNF
Sbjct: 125 LAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNF 184

Query: 182 SDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYG 241
           SDKPKPKEPLYPETEYKLFVGNLSWSVTSE LTQAFQ YGNVVGARVIYNGETGKSRGYG
Sbjct: 185 SDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYG 244

Query: 242 FVSYSTKSEMETALEALNEV 262
           FVSYSTKSEMETALEALNEV
Sbjct: 245 FVSYSTKSEMETALEALNEV 257

[Close]

BLAST of Bhi01G000470 vs. ExPASy TrEMBL
Match: A0A6J1DUT6 (28 kDa ribonucleoprotein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024570 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122
Identity = 238/281 (84.70%), Postives = 254/281 (90.39%), Query Frame = 0


Query: 2   AAATGASFFAT--PLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRP 61
           AA  G+SF A+    +G RSKHWLSDSLLA PSTQ+LP+LSR  A+ESA LRAFSE+ RP
Sbjct: 5   AATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRP 64

Query: 62  VLIISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDS 121
           VL ISAAVVQGE AVTA  EEGV E   EKGGGEAV GGSPVE+GSTKLYFGNLPYSVDS
Sbjct: 65  VLGISAAVVQGEPAVTADAEEGVAE---EKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDS 124

Query: 122 SQLAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRV 181
           SQLA IVQ++GV ELIEVLYDRNTGKSRGFAFVTMSSI+DCN+VIENLDG+AYMGR+LRV
Sbjct: 125 SQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGSAYMGRVLRV 184

Query: 182 NFSDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRG 241
           NFSDKPKPKEPLYPETEYKLFVGNLSWSVTSE+LTQAFQ YGNVVGARVIYNGETG+SRG
Sbjct: 185 NFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRG 244

Query: 242 YGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG 281
           YGFVSYSTK EME ALEALNEVELEGRVIRVSLAEGKQAQG
Sbjct: 245 YGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG 282

[Close]

BLAST of Bhi01G000470 vs. ExPASy TrEMBL
Match: A0A6J1IVW4 (putative G3BP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479089 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 3.0e-122
Identity = 230/269 (85.50%), Postives = 246/269 (91.45%), Query Frame = 0


Query: 2   AAATGASFFATPLRGSRSKHWLSDSLLATPSTQVLPILSRSQAIESAPLRAFSERGRPVL 61
           AAATG SFF TP+RGSRSKHWLSDS LATPSTQVLPILSR  A++SAPLRAFSER RP  
Sbjct: 3   AAATGVSFFTTPIRGSRSKHWLSDSPLATPSTQVLPILSRPLAVKSAPLRAFSERWRPAT 62

Query: 62  IISAAVVQGETAVTAGVEEGVEEDTAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSSQ 121
           +ISAA VQGE A+T G EEGVEE+TAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDS Q
Sbjct: 63  VISAASVQGEAALTVGFEEGVEEETAEKGGGEAVDGGSPVESGSTKLYFGNLPYSVDSPQ 122

Query: 122 LAAIVQDYGVAELIEVLYDRNTGKSRGFAFVTMSSIKDCNKVIENLDGTAYMGRILRVNF 181
           LAAIVQDYGVAELIEVLYDR+TGKSRGFAFVTM+SI+DCNKVIENL+G  YMGRILRVNF
Sbjct: 123 LAAIVQDYGVAELIEVLYDRDTGKSRGFAFVTMNSIEDCNKVIENLNGATYMGRILRVNF 182

Query: 182 SDKPKPKEPLYPETEYKLFVGNLSWSVTSETLTQAFQGYGNVVGARVIYNGETGKSRGYG 241
           SDKPKPKE L+PETEYKLFV NL+WSVTSE+LTQAFQ YGNVVGARVIYNGETG+SRGYG
Sbjct: 183 SDKPKPKEHLFPETEYKLFVRNLAWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYG 242

Query: 242 FVSYSTKSEMETALEALNEVELEGRVIRV 271
           FVSYSTKSEMETAL ALN+   EGRV+ V
Sbjct: 243 FVSYSTKSEMETALVALNDAVFEGRVLSV 271

The following BLAST results are available for this feature:

BLAST of Bhi01G000470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60000.1	5.8e-70	59.73	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G50250.1	4.6e-35	35.74	chloroplast RNA-binding protein 31B	[more]
AT3G52380.1	3.9e-34	36.20	chloroplast RNA-binding protein 33	[more]
AT4G24770.1	3.9e-34	40.80	31-kDa RNA binding protein	[more]
AT2G37220.1	5.1e-34	37.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of Bhi01G000470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28644	8.2e-37	42.99	28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1	[more]
P19684	1.1e-36	39.91	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
P19683	4.5e-35	39.61	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
P82277	2.9e-34	39.00	30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP2 PE=...	[more]
Q9FGS0	6.5e-34	35.74	RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31...	[more]

BLAST of Bhi01G000470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134038.1	6.1e-130	89.61	28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KGN56810.1 hypothetic...	[more]
XP_016898952.1	5.7e-128	91.82	PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein [Cucumis melo]	[more]
KAA0049207.1	6.5e-124	91.92	putative G3BP-like protein [Cucumis melo var. makuwa] >TYK17351.1 putative G3BP-...	[more]
XP_022157973.1	3.6e-122	84.70	28 kDa ribonucleoprotein, chloroplastic [Momordica charantia]	[more]
XP_022979333.1	6.1e-122	85.50	putative G3BP-like protein [Cucurbita maxima]	[more]

BLAST of Bhi01G000470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L496	2.9e-130	89.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134590 PE=4 SV=1	[more]
A0A1S4DSH7	2.8e-128	91.82	LOW QUALITY PROTEIN: putative G3BP-like protein OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3CZH4	3.2e-124	91.92	Putative G3BP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1DUT6	1.7e-122	84.70	28 kDa ribonucleoprotein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1IVW4	3.0e-122	85.50	putative G3BP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479089 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 198..271 e-value: 2.7E-27 score: 106.7 coord: 107..180 e-value: 2.2E-20 score: 83.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 108..177 e-value: 2.3E-14 score: 53.0 coord: 199..269 e-value: 3.2E-21 score: 74.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 197..275 score: 19.80888
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 106..184 score: 17.045906
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 187..280 e-value: 1.2E-28 score: 101.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 70..186 e-value: 5.8E-24 score: 86.8
None	No IPR available	PANTHER	PTHR15241:SF321	31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC	coord: 142..182
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 83..145
None	No IPR available	PANTHER	PTHR15241:SF321	31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC	coord: 188..277
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 188..277 coord: 142..182
None	No IPR available	PANTHER	PTHR15241:SF321	31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC	coord: 83..145
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 192..277
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 101..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000470	Bhi01M000470	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901259	chloroplast rRNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding