Bhi01G000442 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G000442
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	60S acidic ribosomal protein P1-like
Location	chr1: 10932054 .. 10933385 (-)
RNA-Seq Expression	Bhi01G000442
Synteny	Bhi01G000442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTCGGACCAGCTAGGTAGGCCTTGGGTTGGCTAATATTTTGGGACGTGTATTCTGTTTGGGCCTGTCGAAGCAGGGCTCCACAAATAATACAAGCCCACTTTGAAGCATCAATAAAAACCCAAGTTTCAGTGATTTCTCAAACCCTAGAACGCTTTCCCTCTTAGCGCAGCGAACAACAGCCATTCATCTGGTCTGAGATCTCTCTTCAGCTTAATTTTCAACTCTTGTTCTTGTTTTGTTTTTCTGTAATTGATCTCTGTTGTTGTTCTGCGTTTCTTCTTTCTTAATTTTTGCTAGCTTGCAAACGTGCGGTGAAAGATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCCCTCATCCTCTACGATGATAATATCCCCATTACCGTATGCTTCTCTTTAATACTGGCACCCTTCTTCAATATTAAGTTTCTTTTTTTTTTTTTCCTCATTAGTTTCGGGGATCGTAGTAACTAATGGGAAATTACCATGTGTTGTTCTAAGTGATTGGGTGGATATCATGATTTTTTAATATTTTGCGTGATTTCCGTTTAGAATAGAGAAATTACGAAACATGGAGTACATTTAATTTGTATTTCTGTGGAAAGAATGCTTACGATCTAGATCGTCGGCGTGTTTATGATTTTTGTGCCAATTTATGATACCTGCCTTTTTTTTCTTTTATTTCTATGAGAGCGTTCGTTTCCTATCATTTGTAAGGAAATAAAACACCAAAATGTGTTTTTTAAACAGGCAGAAAAGATTGCCACGATTGTAAAGGCAGCTAATGTGCCAGATGTGGAATCTTACTGGTTCGGTCTTTTTGCTAAGCTGGCTGAGAAGCGTAACATTGGAGATTTGATCCTCAATGTTGGGGCTGGTGGTGGTGCCGCAGTGGCTGCTGCTGTCCCTGCTAGTGGAGTTGCTGGTGGCGCTGCTGCTGCAGCTGCTCCTCCACCGGAAGAGAAAAAGGTACGCGATAAGCCATTTCGTTCCTAGGAATCACATAAATATTCAAGTCTTTTCTATTTTGAAAGCTTAGTTTTGAGATTGGATTACTTTTGGTGCTTGCAGGAAGAACCTAAGGAAGAGAGTGACGACGATATGGGATTCAGTTTGTTTGATTAGGTCGGTTTATGGCTTCGCTTATTTTGTTTGAGGTTGATTATCTTTTAGATGCCCGAGGGGGGCTCCTGTTATTTTACAGATATGTAATTTTGGACATCCGTAACAAATTTGCCAGAAGTTTTGATTTGAATATGATTTGATTTCATCTTTGCGGTTGAGTTATATTATAATTATATACCATAGATTATAGATTTGATTTCA

mRNA sequence

CTGTCGGACCAGCTAGGTAGGCCTTGGGTTGGCTAATATTTTGGGACGTGTATTCTGTTTGGGCCTGTCGAAGCAGGGCTCCACAAATAATACAAGCCCACTTTGAAGCATCAATAAAAACCCAAGTTTCAGTGATTTCTCAAACCCTAGAACGCTTTCCCTCTTAGCGCAGCGAACAACAGCCATTCATCTGCTTGCAAACGTGCGGTGAAAGATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCCCTCATCCTCTACGATGATAATATCCCCATTACCGCAGAAAAGATTGCCACGATTGTAAAGGCAGCTAATGTGCCAGATGTGGAATCTTACTGGTTCGGTCTTTTTGCTAAGCTGGCTGAGAAGCGTAACATTGGAGATTTGATCCTCAATGTTGGGGCTGGTGGTGGTGCCGCAGTGGCTGCTGCTGTCCCTGCTAGTGGAGTTGCTGGTGGCGCTGCTGCTGCAGCTGCTCCTCCACCGGAAGAGAAAAAGGAAGAACCTAAGGAAGAGAGTGACGACGATATGGGATTCAGTTTGTTTGATTAGGTCGGTTTATGGCTTCGCTTATTTTGTTTGAGGTTGATTATCTTTTAGATGCCCGAGGGGGGCTCCTGTTATTTTACAGATATGTAATTTTGGACATCCGTAACAAATTTGCCAGAAGTTTTGATTTGAATATGATTTGATTTCATCTTTGCGGTTGAGTTATATTATAATTATATACCATAGATTATAGATTTGATTTCA

Coding sequence (CDS)

ATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCCCTCATCCTCTACGATGATAATATCCCCATTACCGCAGAAAAGATTGCCACGATTGTAAAGGCAGCTAATGTGCCAGATGTGGAATCTTACTGGTTCGGTCTTTTTGCTAAGCTGGCTGAGAAGCGTAACATTGGAGATTTGATCCTCAATGTTGGGGCTGGTGGTGGTGCCGCAGTGGCTGCTGCTGTCCCTGCTAGTGGAGTTGCTGGTGGCGCTGCTGCTGCAGCTGCTCCTCCACCGGAAGAGAAAAAGGAAGAACCTAAGGAAGAGAGTGACGACGATATGGGATTCAGTTTGTTTGATTAG

Protein sequence

MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD

Homology

[Close]

BLAST of Bhi01G000442 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 127.1 bits (318), Expect = 9.0e-30
Identity = 79/116 (68.10%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIAT+VKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-TIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA VAAA PA+G  GGAAAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAPAAG--GGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Bhi01G000442 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 127.1 bits (318), Expect = 9.0e-30
Identity = 79/116 (68.10%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIAT+VKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-TIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA VAAA PA+G  GGAAAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAPAAG--GGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Bhi01G000442 vs. TAIR 10
Match: AT4G00810.1 (60S acidic ribosomal protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-29
Identity = 74/114 (64.91%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I IT++KIAT+VKAA V ++ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGV-EIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGAGGG   A    A+  A G AAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Bhi01G000442 vs. TAIR 10
Match: AT4G00810.2 (60S acidic ribosomal protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-29
Identity = 74/114 (64.91%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I IT++KIAT+VKAA V ++ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGV-EIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGAGGG   A    A+  A G AAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Bhi01G000442 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 124.4 bits (311), Expect = 5.8e-29
Identity = 78/116 (67.24%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIAT+VKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-SIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA VAAA PA   AGG AAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAPA---AGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of Bhi01G000442 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.6e-34
Identity = 88/114 (77.19%), Postives = 95/114 (83.33%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           M++GE+AC YAALIL DD I ITAEKIATIVKAAN+  VESYW  LFAKL EKRN+ DLI
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANI-KVESYWPALFAKLLEKRNVEDLI 60

Query: 61  LNVGAGGGAA-VAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           L+VG+GGGAA VAAA P    AGGAAAAAAP  EEKKEE KEESDDDMGFSLFD
Sbjct: 61  LSVGSGGGAAPVAAAAP----AGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]

BLAST of Bhi01G000442 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-28
Identity = 79/116 (68.10%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIAT+VKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-TIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA VAAA PA+G  GGAAAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAPAAG--GGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Bhi01G000442 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28
Identity = 74/114 (64.91%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I IT++KIAT+VKAA V ++ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGV-EIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGAGGG   A    A+  A G AAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Bhi01G000442 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 8.2e-28
Identity = 78/116 (67.24%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I ITA+KIAT+VKAA V  +ESYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-SIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGA VAAA PA   AGG AAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAPA---AGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of Bhi01G000442 vs. ExPASy Swiss-Prot
Match: P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-26
Identity = 73/113 (64.60%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MST E+AC+YAALIL+DD + ITA+ I TI KAA V +VE YW  LFAKL  K+++ DLI
Sbjct: 1   MSTSELACTYAALILHDDGLEITADNINTICKAAGV-EVEGYWPALFAKLFAKKSMDDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
            NVGAGGGAA AAA PA   AGGA AA A P +E+K+EP EE  +DMGFSLFD
Sbjct: 61  TNVGAGGGAAPAAAAPA---AGGAPAAGAAPKKEEKKEPSEE--EDMGFSLFD 107

[Close]

BLAST of Bhi01G000442 vs. NCBI nr
Match: XP_038883955.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 211.1 bits (536), Expect = 5.1e-51
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Bhi01G000442 vs. NCBI nr
Match: XP_008437779.1 (PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa] >TYK20773.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa])

HSP 1 Score: 196.8 bits (499), Expect = 9.9e-47
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIAT+VKAANV DVESYW+ LFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAVAAAVPA G A G AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Bhi01G000442 vs. NCBI nr
Match: XP_004133766.1 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical protein Csa_009966 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 2.2e-46
Identity = 104/113 (92.04%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIAT+VKAA V DVESYW+GLFAKLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAVAAA PA G AGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Bhi01G000442 vs. NCBI nr
Match: XP_022144008.1 (60S acidic ribosomal protein P1-like [Momordica charantia])

HSP 1 Score: 185.7 bits (470), Expect = 2.3e-43
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA +VKAANV  V+SYW+ LFAKLAEKRNIGDLI
Sbjct: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           +NVGAGGGAAVAAAVPA G AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Bhi01G000442 vs. NCBI nr
Match: XP_022974253.1 (60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_023538866.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-43
Identity = 102/113 (90.27%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MS GEIACSYAALILYDDNIP+TAEK+AT+VKAA V D ESYWF LFAKLAEKRNIGDLI
Sbjct: 1   MSVGEIACSYAALILYDDNIPVTAEKLATLVKAAGV-DAESYWFSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           +NVGAGGGAAVAAAVPA G AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGG-AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 111

[Close]

BLAST of Bhi01G000442 vs. ExPASy TrEMBL
Match: A0A5D3DB57 (60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00330 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.8e-47
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIAT+VKAANV DVESYW+ LFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAVAAAVPA G A G AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Bhi01G000442 vs. ExPASy TrEMBL
Match: A0A1S3AUG9 (60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.8e-47
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIAT+VKAANV DVESYW+ LFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAVAAAVPA G A G AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Bhi01G000442 vs. ExPASy TrEMBL
Match: A0A0A0L5M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 104/113 (92.04%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIPITAEKIAT+VKAA V DVESYW+GLFAKLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGAAVAAA PA G AGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Bhi01G000442 vs. ExPASy TrEMBL
Match: A0A6J1CS45 (60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111013791 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA +VKAANV  V+SYW+ LFAKLAEKRNIGDLI
Sbjct: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           +NVGAGGGAAVAAAVPA G AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Bhi01G000442 vs. ExPASy TrEMBL
Match: A0A6J1ICK4 (60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 102/113 (90.27%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60
           MS GEIACSYAALILYDDNIP+TAEK+AT+VKAA V D ESYWF LFAKLAEKRNIGDLI
Sbjct: 1   MSVGEIACSYAALILYDDNIPVTAEKLATLVKAAGV-DAESYWFSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           +NVGAGGGAAVAAAVPA G AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGG-AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 111

The following BLAST results are available for this feature:

BLAST of Bhi01G000442 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47700.1	9.0e-30	68.10	60S acidic ribosomal protein family	[more]
AT5G47700.2	9.0e-30	68.10	60S acidic ribosomal protein family	[more]
AT4G00810.1	1.2e-29	64.91	60S acidic ribosomal protein family	[more]
AT4G00810.2	1.2e-29	64.91	60S acidic ribosomal protein family	[more]
AT1G01100.1	5.8e-29	67.24	60S acidic ribosomal protein family	[more]

BLAST of Bhi01G000442 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52855	7.6e-34	77.19	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
Q8LEQ0	1.3e-28	68.10	60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ...	[more]
O23095	1.6e-28	64.91	60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ...	[more]
Q8LCW9	8.2e-28	67.24	60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ...	[more]
P29763	3.4e-26	64.60	60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1	[more]

BLAST of Bhi01G000442 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883955.1	5.1e-51	100.00	60S acidic ribosomal protein P1-like [Benincasa hispida]	[more]
XP_008437779.1	9.9e-47	92.92	PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S...	[more]
XP_004133766.1	2.2e-46	92.04	60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical prote...	[more]
XP_022144008.1	2.3e-43	87.61	60S acidic ribosomal protein P1-like [Momordica charantia]	[more]
XP_022974253.1	3.0e-43	90.27	60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acid...	[more]

BLAST of Bhi01G000442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB57	4.8e-47	92.92	60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3AUG9	4.8e-47	92.92	60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=...	[more]
A0A0A0L5M7	1.1e-46	92.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1	[more]
A0A6J1CS45	1.1e-43	87.61	60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1ICK4	1.4e-43	90.27	60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 22..112 e-value: 2.0E-24 score: 86.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..113
None	No IPR available	PANTHER	PTHR45696:SF22	60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED	coord: 1..113
None	No IPR available	PANTHER	PTHR45696	60S ACIDIC RIBOSOMAL PROTEIN P1	coord: 1..113
None	No IPR available	CDD	cd05831	Ribosomal_P1	coord: 5..112 e-value: 1.45474E-26 score: 92.7699
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..64 e-value: 5.2E-30 score: 105.1
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 6..113 score: 14.682434

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000442	Bhi01M000442	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032147	activation of protein kinase activity
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0030295	protein kinase activator activity
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0003735	structural constituent of ribosome