Bhi01G000319 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G000319
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	protein CURVATURE THYLAKOID 1A, chloroplastic-like
Location	chr1: 7585473 .. 7588258 (+)
RNA-Seq Expression	Bhi01G000319
Synteny	Bhi01G000319

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACAACGAAGGACCTCTCCACGTGTCGCTACCAGAGGCCATCTTCCCAAAATGCGATCGCGGATAAACAAGCCATTTCTGAGCATAGAAAATGGCGAAATTAACAAAAAAAATCTCTGCTAAGTCGTCAGCTGCTCCTTGACGGCCAGTTGATTGAGTATTGTCCTCTCTTTCCGGCGCTGATTCTTAATTTGATTTAACTTTCTGGAAAGAAATGGCAGCCACGGCCTCCCCCACAGCGGCCACCGCCGTTCTGAGACCTTCTCTGGCTGCTTCTCAACCCACTCGCCGCTCGGTCTTGCCGCTCCTTCCCCCTCGTTTCGGCTCCCCGTCCTTCTCTACTTCCCTCAAATTCTCCTCAGGTAAATTTCTCGTGCAATTCCATTAATTTTCTTTGAGGCATTTCGTCGAACACCTTGTAGGAATCGAAAATTGAGGTCTGTTTGACTTCTAATTTTTCGTTTCTCGTTTTGTTTTGTTTATTTGGGTAGTCTCTTAGTTGGACATTAACTGGTTGAGTTTGGTCGAATATCTATCCTTCAAATCACTTTTATATGTTCATGAAGAAAATTTGCTAGGTAACTGAAATGCAACTATGGAGTCAATGCAATTTGGATTTTCAAAATACATTACGTTAATATGCTAGCTACTCGGACTCAGATTGGGGTTCCTTAAAATTTTGGATTAGAAGAGATTGTACTTTTTCTTATGGAGCACAAGTGGCCTTCTAGGTGATTAAATTTGGAGACAGTTCCATTTTGTGACCGAACGGTGAACAGGAGCATATACTATCATTGTGTCGGAAAATGGATTGTTGTTGTTCATGTGATTGGAGCCAGAAGTGTATTTAGTTTTATAGTTCATTCAGTTCTGGCAACTCAACTGCTACAAGATTGGATGCGTTAAGTTTGCTGATTAATCTTGCATTATACATCTAGGTATTTGACCATAGTCTTTTTATCAGGGGCCTTAAATTTGGAAGAAACGGATTAATGCGCTGTGATATAGCATCCAGAAGTTTTTCAAACCGATTTCACGCATCATAAATCTATAAACATGCTTACTTTGAAGAGAAACCATGCCATGTGTGAATTTTAGATCAAGATATTCAATGTGCAAATGCATAGCTTTAATCCATTAAATATCTTAGATTTGTGTGGCTTTTGAAACTTAAGTTTTAGAGGACTGGTGTATTATTATATGCACTTCGGGAATTCAAAGCCAATCTTTTTGTTAGCAACCTTTGCCCCTTTTTTCGGATAGAAACAATTTTCATCGAGGAAAACCTGTCCCACCTTGATTAAAAAAAAGAAGTTGGAAATGAGGCCTGTTGTTTAAGATCATTGTTCACTTTTTGTGTACTAAATTGTCTTCTTTTATTGTTCATTGCTATTTCTGAATTTTGAATTGGGTGAACTTTCACTGGGCACATTAGTTTCTTGATTTTAACCCTTTACACCCAAACTTTATTGGATTTTCCCAACCTACCATTTGGTGACAGAGTCACGTAGATCGTCTCTGCTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGCTGCTGATGCATCCGAGCTCTTTACAGACTTGAAAGAAAAGGTAGAACCACAGGAAACATAACGAGGCCCATTATTGTCATAATTCTGAGAAAGTTGTTGATTTTTTATCTCTTTATAAATTTTCATCATTCATTTTATGGTCTAATACTGACTCTGAGATGACTCTAAGATATAATTTCATCCTACTGTTTACTAGTGGGATGCCCTTGAGAACAAATCCACGGTACTTCTCTACGGAGGTGGGGCGATTGTTGCAGTTTGGCTTTCTTCAATTCTTGTTGGTGCAATCAACTCAGTTCCATTGGTATATGATTCCATCAAACTCGCGCTTTTGTATTTTTTATCATCTATATTCACTGATCGATATCACCATTGCTAGTTGATGTTCTCCCTTGTTATCCACAAAAAATGTTGCTTTCAAATTTATACTTCGAAATTGTTTCTTCCCTTCTAAAGCCTTTTGACACTTACTCTCCATCCATCTTCTCATCAGCTTCCGAAGATCCTGGAGTTGGTAGGACTTGGATATACGGGGTGGTTTGTGTACCGATATCTACTCTTCAAGGTAAGTTGAGAAGAGAACTATGGTTTGCTTCAAACAAGGTCTTGCACCCTATCAAAACTTTAATTTTTCATGTTTTCCCAAGCTTCACCCTTAATGGAATTTTGGTATAGTTTCTAAGTTTTGTTTGCGAATAAAAATCTTGAAATTCTAGTTACATGTTTCTCATGAGATCGTCAGGCTAGAATAATCCGATGTTATAATGGATCAATATGCCGAATACAATCTAGAGTTCTAAGAAACCATAGAAATCTTGGATCTTGATTGGCTCTGCAACTAGATACTAACTGAAAAAATGTTCTTTGTATGTTCTTTTTCCACCTTCCTCAGTCAAGCAGAAAAGAACTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAACCGAATAAGATGCGTGTTATCGGGTGCCATGTTCGACATGCTTGGTTCCTCTTATTATCATTTTGTACTCTATTCTCTCATTTATAAGAGGTAATCTAAATCATGTAATGTGGAATAGGTTTTGCTTTAATCCCTGTAACTCATGTTCCCTTTCATTACATCTGTGTAATAAGATTTGTCAAGTTCATTAATGGGAAACCCCCCTTTTTCTCAAATTTACTTCTTGCTTCAGAAGAAAATGGTGAAATTGATTGATGGCTTGATGTTAGTTTTTTGA

mRNA sequence

TCACAACGAAGGACCTCTCCACGTGTCGCTACCAGAGGCCATCTTCCCAAAATGCGATCGCGGATAAACAAGCCATTTCTGAGCATAGAAAATGGCGAAATTAACAAAAAAAATCTCTGCTAAGTCGTCAGCTGCTCCTTGACGGCCAGTTGATTGAGTATTGTCCTCTCTTTCCGGCGCTGATTCTTAATTTGATTTAACTTTCTGGAAAGAAATGGCAGCCACGGCCTCCCCCACAGCGGCCACCGCCGTTCTGAGACCTTCTCTGGCTGCTTCTCAACCCACTCGCCGCTCGGTCTTGCCGCTCCTTCCCCCTCGTTTCGGCTCCCCGTCCTTCTCTACTTCCCTCAAATTCTCCTCAGAGTCACGTAGATCGTCTCTGCTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGCTGCTGATGCATCCGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCCACGGTACTTCTCTACGGAGGTGGGGCGATTGTTGCAGTTTGGCTTTCTTCAATTCTTGTTGGTGCAATCAACTCAGTTCCATTGCTTCCGAAGATCCTGGAGTTGGTAGGACTTGGATATACGGGGTGGTTTGTGTACCGATATCTACTCTTCAAGTCAAGCAGAAAAGAACTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAACCGAATAAGATGCGTGTTATCGGGTGCCATGTTCGACATGCTTGGTTCCTCTTATTATCATTTTGTACTCTATTCTCTCATTTATAAGAGGTAATCTAAATCATGTAATGTGGAATAGGTTTTGCTTTAATCCCTGTAACTCATGTTCCCTTTCATTACATCTGTGTAATAAGATTTGTCAAGTTCATTAATGGGAAACCCCCCTTTTTCTCAAATTTACTTCTTGCTTCAGAAGAAAATGGTGAAATTGATTGATGGCTTGATGTTAGTTTTTTGA

Coding sequence (CDS)

ATGGCAGCCACGGCCTCCCCCACAGCGGCCACCGCCGTTCTGAGACCTTCTCTGGCTGCTTCTCAACCCACTCGCCGCTCGGTCTTGCCGCTCCTTCCCCCTCGTTTCGGCTCCCCGTCCTTCTCTACTTCCCTCAAATTCTCCTCAGAGTCACGTAGATCGTCTCTGCTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGCTGCTGATGCATCCGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCCACGGTACTTCTCTACGGAGGTGGGGCGATTGTTGCAGTTTGGCTTTCTTCAATTCTTGTTGGTGCAATCAACTCAGTTCCATTGCTTCCGAAGATCCTGGAGTTGGTAGGACTTGGATATACGGGGTGGTTTGTGTACCGATATCTACTCTTCAAGTCAAGCAGAAAAGAACTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAACCGAATAA

Protein sequence

MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE

Homology

[Close]

BLAST of Bhi01G000319 vs. TAIR 10
Match: AT4G01150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 192.2 bits (487), Expect = 3.3e-49
Identity = 113/166 (68.07%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPR-FGSPSFSTSLKFSSES--RRSSLL 60
           MA + + +++ AV+ P + A   TR S +P LPPR FG  SF+  LK  S +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVP 120
           +TRA SSEE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGAINSVP
Sbjct: 61  KTRA-SSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 LLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           LLPK++ELVGLGYTGWFVYRYLLFKSSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Bhi01G000319 vs. TAIR 10
Match: AT4G01150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24
Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPR-FGSPSFSTSLKFSSES--RRSSLL 60
           MA + + +++ AV+ P + A   TR S +P LPPR FG  SF+  LK  S +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVP 120
           +TRA SSEE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGAINSVP
Sbjct: 61  KTRA-SSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

[Close]

BLAST of Bhi01G000319 vs. TAIR 10
Match: AT4G38100.1 (unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 5.6e-17
Identity = 47/110 (42.73%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 58  QTRASSSEESSAAD----ASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAI 117
           + + S+SE   A D    A E   D+K   D      ++LLYG GAIVA++L+S +V ++
Sbjct: 85  EEKNSNSEAPQAEDEETQALEFLNDIKLDSD---KTYSILLYGSGAIVALYLTSAIVSSL 144

Query: 118 NSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
            ++PL PK++E+VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 145 EAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of Bhi01G000319 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11
Identity = 42/160 (26.25%), Postives = 88/160 (55.00%), Query Frame = 0


Query: 3   ATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTRAS 62
           A+AS ++ + +  P+L     TR +          + ++   +  +  +R ++ +    +
Sbjct: 23  ASASASSPSCISLPTLPIQSHTRAA---------KATAYCRKIVRNVVTRATTEVGEAPA 82

Query: 63  SSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKI 122
           ++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ AI+ +PL+P +
Sbjct: 83  TTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGV 142

Query: 123 LELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGT 163
           LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 143 LELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Bhi01G000319 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit )

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11
Identity = 42/160 (26.25%), Postives = 88/160 (55.00%), Query Frame = 0


Query: 3   ATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTRAS 62
           A+AS ++ + +  P+L     TR +          + ++   +  +  +R ++ +    +
Sbjct: 23  ASASASSPSCISLPTLPIQSHTRAA---------KATAYCRKIVRNVVTRATTEVGEAPA 82

Query: 63  SSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKI 122
           ++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ AI+ +PL+P +
Sbjct: 83  TTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGV 142

Query: 123 LELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGT 163
           LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 143 LELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Bhi01G000319 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.6e-48
Identity = 113/166 (68.07%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPR-FGSPSFSTSLKFSSES--RRSSLL 60
           MA + + +++ AV+ P + A   TR S +P LPPR FG  SF+  LK  S +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVP 120
           +TRA SSEE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGAINSVP
Sbjct: 61  KTRA-SSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 LLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           LLPK++ELVGLGYTGWFVYRYLLFKSSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Bhi01G000319 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.9e-16
Identity = 47/110 (42.73%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 58  QTRASSSEESSAAD----ASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAI 117
           + + S+SE   A D    A E   D+K   D      ++LLYG GAIVA++L+S +V ++
Sbjct: 85  EEKNSNSEAPQAEDEETQALEFLNDIKLDSD---KTYSILLYGSGAIVALYLTSAIVSSL 144

Query: 118 NSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
            ++PL PK++E+VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 145 EAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of Bhi01G000319 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-10
Identity = 42/160 (26.25%), Postives = 88/160 (55.00%), Query Frame = 0


Query: 3   ATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTRAS 62
           A+AS ++ + +  P+L     TR +          + ++   +  +  +R ++ +    +
Sbjct: 23  ASASASSPSCISLPTLPIQSHTRAA---------KATAYCRKIVRNVVTRATTEVGEAPA 82

Query: 63  SSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKI 122
           ++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ AI+ +PL+P +
Sbjct: 83  TTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGV 142

Query: 123 LELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGT 163
           LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 143 LELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Bhi01G000319 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 54  SSLLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAI 113
           SS+     +S E S ++   ++ + ++  WD  E++  ++  G   IVA+W S  L+ AI
Sbjct: 48  SSISLMVKASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAI 107

Query: 114 NSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIA 161
           + +P++    ELVG+ ++ WF YRYLLFK  R+EL+   + +KK +A
Sbjct: 108 DKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELS---KIVKKSVA 151

[Close]

BLAST of Bhi01G000319 vs. ExPASy Swiss-Prot
Match: Q119Z5 (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.1e-08
Identity = 30/70 (42.86%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 94  LYGGGAIVAVWLS--SILVGAINSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADD 153
           L+G  A+V +  +  ++++ A++ +P+L  I EL+G+ Y  WFVYRYLL +S+R+EL D 
Sbjct: 809 LFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDK 868

Query: 154 IEALKKKIAG 162
           IE +K++I G
Sbjct: 869 IENIKREIFG 878

[Close]

BLAST of Bhi01G000319 vs. NCBI nr
Match: XP_038876984.1 (protein CURVATURE THYLAKOID 1A, chloroplastic [Benincasa hispida])

HSP 1 Score: 295.0 bits (754), Expect = 3.8e-76
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTR 60
           MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 163

[Close]

BLAST of Bhi01G000319 vs. NCBI nr
Match: XP_022924752.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita moschata] >KAG6582652.1 Protein CURVATURE THYLAKOID 1A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019049.1 Protein CURVATURE THYLAKOID 1A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.3 bits (721), Expect = 2.6e-72
Identity = 156/163 (95.71%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTR 60
           MAATASPTAATAVLRPSL A QPTRRS LPLLPPR GSPSF+TSLKFS ESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRLGSPSFTTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]

BLAST of Bhi01G000319 vs. NCBI nr
Match: XP_008437946.1 (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis melo] >ADN34169.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0048917.1 protein CURVATURE THYLAKOID 1A [Cucumis melo var. makuwa] >TYK17651.1 protein CURVATURE THYLAKOID 1A [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 3.4e-72
Identity = 159/164 (96.95%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSP-SFSTSLKFSSESRRSSLLQT 60
           MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPR GSP SFSTSLK S +SRRSSLLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRVGSPSSFSTSLKLSLDSRRSSLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164

[Close]

BLAST of Bhi01G000319 vs. NCBI nr
Match: XP_022980149.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 281.6 bits (719), Expect = 4.4e-72
Identity = 156/163 (95.71%), Postives = 156/163 (95.71%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTR 60
           MAATASPTAATAVLRPSL A QPTRRS LPLLPPR GSPSF TSLKFS ESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRIGSPSFPTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]

BLAST of Bhi01G000319 vs. NCBI nr
Match: XP_023529055.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.6 bits (719), Expect = 4.4e-72
Identity = 156/163 (95.71%), Postives = 156/163 (95.71%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTR 60
           MAATASPTAATAVLRPSL A QPTRRS LPLLPPR GSPSF TSLKFS ESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRLGSPSFPTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]

BLAST of Bhi01G000319 vs. ExPASy TrEMBL
Match: A0A6J1E9V5 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111432156 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72
Identity = 156/163 (95.71%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTR 60
           MAATASPTAATAVLRPSL A QPTRRS LPLLPPR GSPSF+TSLKFS ESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRLGSPSFTTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]

BLAST of Bhi01G000319 vs. ExPASy TrEMBL
Match: A0A5D3D097 (Protein CURVATURE THYLAKOID 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005230 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 159/164 (96.95%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSP-SFSTSLKFSSESRRSSLLQT 60
           MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPR GSP SFSTSLK S +SRRSSLLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRVGSPSSFSTSLKLSLDSRRSSLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164

[Close]

BLAST of Bhi01G000319 vs. ExPASy TrEMBL
Match: E5GCH0 (CAAD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 159/164 (96.95%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSP-SFSTSLKFSSESRRSSLLQT 60
           MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPR GSP SFSTSLK S +SRRSSLLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRVGSPSSFSTSLKLSLDSRRSSLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164

[Close]

BLAST of Bhi01G000319 vs. ExPASy TrEMBL
Match: A0A1S3AVS8 (protein CURVATURE THYLAKOID 1A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483215 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 159/164 (96.95%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSP-SFSTSLKFSSESRRSSLLQT 60
           MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPR GSP SFSTSLK S +SRRSSLLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRVGSPSSFSTSLKLSLDSRRSSLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164

[Close]

BLAST of Bhi01G000319 vs. ExPASy TrEMBL
Match: A0A6J1IYH5 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111479625 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.1e-72
Identity = 156/163 (95.71%), Postives = 156/163 (95.71%), Query Frame = 0


Query: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRFGSPSFSTSLKFSSESRRSSLLQTR 60
           MAATASPTAATAVLRPSL A QPTRRS LPLLPPR GSPSF TSLKFS ESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRIGSPSFPTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAGTE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

The following BLAST results are available for this feature:

BLAST of Bhi01G000319 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01150.1	3.3e-49	68.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G01150.2	2.1e-24	59.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G38100.1	5.6e-17	42.73	unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 pl...	[more]
AT2G46820.1	2.7e-11	26.25	photosystem I P subunit	[more]
AT2G46820.2	2.7e-11	26.25	photosystem I P subunit	[more]

BLAST of Bhi01G000319 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04616	4.6e-48	68.07	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LDD3	7.9e-16	42.73	Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LCA1	3.8e-10	26.25	Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M812	5.5e-09	34.58	Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q119Z5	6.1e-08	42.86	Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=...	[more]

BLAST of Bhi01G000319 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876984.1	3.8e-76	100.00	protein CURVATURE THYLAKOID 1A, chloroplastic [Benincasa hispida]	[more]
XP_022924752.1	2.6e-72	95.71	protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita moschata] >KAG6582...	[more]
XP_008437946.1	3.4e-72	96.95	PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis melo] >ADN3416...	[more]
XP_022980149.1	4.4e-72	95.71	protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita maxima]	[more]
XP_023529055.1	4.4e-72	95.71	protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Bhi01G000319 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E9V5	1.2e-72	95.71	protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662...	[more]
A0A5D3D097	1.6e-72	96.95	Protein CURVATURE THYLAKOID 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
E5GCH0	1.6e-72	96.95	CAAD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3AVS8	1.6e-72	96.95	protein CURVATURE THYLAKOID 1A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1IYH5	2.1e-72	95.71	protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	PANTHER	PTHR33222:SF31	MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED	coord: 2..163
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 78..161 e-value: 1.7E-30 score: 104.7
IPR033344	Protein CURVATURE THYLAKOID 1	PANTHER	PTHR33222	FAMILY NOT NAMED	coord: 2..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000319	Bhi01M000319	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090391	granum assembly
biological_process	GO:0097753	membrane bending
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009515	granal stacked thylakoid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid